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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRPSAP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
36.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
26.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
24.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
24.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
23.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
23.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
20.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
19.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
18.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
18.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
15.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
15.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
15.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
14.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
14.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
13.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
12.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
11.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
11.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
10.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
10.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
9.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
9.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
9.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
8.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
7.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
7.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
6.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
6.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
5.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
5.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
5.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
4.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
4.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
3.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
2.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRPSAP2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
49.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
47.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
46.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
44.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
41.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
40.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
37.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
37.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
36.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
35.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
35.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
34.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
33.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
33.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
33.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
33.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
31.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
30.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
30.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
29.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
29.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
29.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
29.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
28.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
28.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
28.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
28.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
28.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
28.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
28.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
28.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
27.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
27.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
27.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
27.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
27.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
26.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
26.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
26.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
26.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
26.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
26.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
25.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
25.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
25.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
25.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
25.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
25.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
25.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
25.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
25.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
25.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
25.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
25.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
25.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
25.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
25.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
25.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
24.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
24.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
24.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
24.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
24.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
24.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
24.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
24.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
24.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
24.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
24.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
24.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
24.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
24.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
24.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
24.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
24.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
23.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
23.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
23.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
23.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
23.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
23.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
23.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
23.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
23.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
23.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
23.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
23.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
23.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
22.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
22.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
22.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
22.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
22.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
22.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
22.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
22.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
22.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
22.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
22.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
22.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
22.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
22.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
22.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
22.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
22.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
22.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
22.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
22.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
22.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
21.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
21.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
21.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
21.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
21.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
21.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
21.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
21.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
21.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
21.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
21.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
21.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
21.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
21.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
21.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
21.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
21.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
21.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
21.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
21.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
21.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
20.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
20.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
20.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
20.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
20.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
20.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
20.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
20.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
20.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
20.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
20.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
20.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
20.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
20.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
20.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
20.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
20.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
20.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
20.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
20.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
20.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
20.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
20.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
20.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
20.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
20.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
20.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
20.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
20.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
20.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
20.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
20.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
19.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
19.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
19.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
19.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
19.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
19.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
19.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
19.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
19.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
19.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
19.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
19.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
19.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
19.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
19.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
19.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
19.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
19.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
19.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
19.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
19.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
19.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
19.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
18.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
18.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
18.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
18.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
18.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
18.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
18.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
18.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
18.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
18.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
18.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
18.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
18.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
18.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
18.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
18.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
18.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
18.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
18.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
18.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
18.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
18.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
18.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
18.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
18.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
17.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
17.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
17.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
17.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
17.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
17.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
17.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
17.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
17.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
17.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
17.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
17.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
17.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
17.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
17.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
17.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
17.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
17.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
17.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
17.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
17.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
17.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
17.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
17.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
17.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
16.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
16.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
16.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
16.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
16.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
16.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
16.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
16.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
16.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
16.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
16.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
16.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
16.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
16.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
16.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
16.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
16.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
16.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
16.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
16.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
16.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
15.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
15.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
15.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
15.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
15.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
15.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
15.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
15.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
15.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
15.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
15.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
15.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
15.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
15.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
15.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
15.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
15.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
14.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
14.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
14.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
14.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
14.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
14.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
14.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
14.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
14.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
14.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
14.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
13.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
13.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
13.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
13.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
13.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
13.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
13.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
12.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
12.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
12.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
12.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
12.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
12.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
12.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
12.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
11.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
11.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
11.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
11.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
10.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
10.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
10.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
10.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
9.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
9.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
8.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
8.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
8.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
7.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
7.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
6.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
5.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
4.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
3.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
2.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRPSAP2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
38.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
36.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
35.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
34.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
33.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
33.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
33.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
33.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
32.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
31.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
31.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
31.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
30.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
30.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
29.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
29.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
29.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
29.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
29.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
28.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
27.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
27.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
27.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
27.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
27.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
27.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
27.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
26.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
26.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
26.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
26.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
26.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
26.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
26.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
26.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
25.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
25.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
25.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
25.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
24.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
24.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
23.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
23.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
23.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
23.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
23.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
22.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
22.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
22.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
22.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
20.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
19.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
19.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
19.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
19.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
18.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
18.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
17.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
17.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
16.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
16.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
16.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
16.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
16.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
16.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
15.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
14.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
14.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
14.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
14.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
12.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
12.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
12.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
11.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
9.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRPSAP2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
123.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
64.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
60.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
58.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
54.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
50.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
48.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
46.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
46.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
43.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
43.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
42.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
42.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
41.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
41.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
40.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
38.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
37.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
37.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
37.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
37.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
37.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
37.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
37.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
37.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
36.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
36.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
36.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
36.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
35.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
35.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
34.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
34.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
33.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
33.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
33.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
33.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
33.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
33.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
32.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
32.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
32.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
32.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
31.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
31.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
31.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
30.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
30.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
30.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
29.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
29.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
29.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
29.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
29.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
29.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
29.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
29.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
28.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
28.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
28.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
28.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
28.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
27.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
27.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
27.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
27.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
27.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
27.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
26.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
26.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
26.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
26.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
26.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
26.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
26.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
26.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
26.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
26.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
25.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
25.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
25.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
25.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
25.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
25.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
25.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
25.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
25.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
25.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
25.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
25.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
25.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
24.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
24.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
24.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
24.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
24.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
24.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
24.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
24.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
23.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
23.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
23.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
22.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
22.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
22.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
22.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
22.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
22.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
21.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
21.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
21.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
21.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
21.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
21.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
21.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
21.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
21.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
21.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
20.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
19.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
19.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
19.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
19.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
19.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
19.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
19.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
18.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
18.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
18.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
18.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
18.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
18.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
18.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
18.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
18.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
17.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
17.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
17.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
17.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
17.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
17.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
17.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
17.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
17.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
17.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
17.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
17.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
16.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
16.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
16.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
16.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
16.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
15.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
15.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
15.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
15.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
15.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
15.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
15.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
15.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
14.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
14.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
14.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
14.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
14.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
13.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
13.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
13.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
13.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
13.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
13.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
12.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
12.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
12.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
12.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
12.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
12.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
12.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
11.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
11.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
10.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
9.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
9.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
9.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
9.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
8.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
8.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
8.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
7.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
7.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
7.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
7.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
6.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
6.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
6.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
4.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
4.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
1.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
1.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0025110003
Tumor
1.0
CPT0000640003
Tumor
1.0
CPT0006440003
Tumor
0.9
CPT0026410003
Tumor
0.9
CPT0088970003
Tumor
0.9
CPT0077110003
Tumor
0.7
CPT0019130003
Tumor
0.7
CPT0009000003
Tumor
0.7
CPT0001540009
Tumor
0.7
CPT0007860003
Tumor
0.6
CPT0078830003
Tumor
0.6
CPT0006630003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0088900003
Tumor
0.6
CPT0014370004
Tumor
0.6
CPT0079270003
Tumor
0.6
CPT0079480003
Tumor
0.6
CPT0024670003
Tumor
0.6
CPT0010160003
Tumor
0.6
CPT0012370003
Tumor
0.6
CPT0000870016
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0092290003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0064370003
Tumor
0.5
CPT0065930003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0065810003
Tumor
0.5
CPT0066470004
Tumor
0.5
CPT0078930003
Tumor
0.5
CPT0089460004
Tumor
0.5
CPT0025290003
Tumor
0.5
CPT0002270011
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0023690003
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0000780007
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0025350003
Tumor
0.4
CPT0081990003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0006900003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0092790003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0001220008
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0088760003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0001180009
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0025920001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0012550003
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0087050003
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0088550004
Tumor
-0.2
CPT0000890001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0066520001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0079300001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0069190001
Normal
-0.3
CPT0065820001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0063630003
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0012570003
Normal
-0.3
CPT0012920003
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0017450001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0078660003
Tumor
-0.3
CPT0000660001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0079180003
Tumor
-0.3
CPT0007470001
Normal
-0.3
CPT0078530001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0092190003
Normal
-0.4
CPT0001190001
Normal
-0.4
CPT0078800003
Tumor
-0.4
CPT0012180003
Tumor
-0.4
CPT0084560003
Tumor
-0.5
CPT0017850003
Tumor
-0.5
CPT0077320001
Normal
-0.5
CPT0075170001
Normal
-0.6
CPT0001340003
Tumor
-0.6
CPT0084590001
Normal
-0.7
CPT0001270001
Normal
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
