HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:5.5 nTPM
HPA Brain:10.3 nTPM
GTEx:5.5 nTPM
FANTOM5:6.1 Scaled Tags Per Million
Pig:11.1 nTPM
Mouse:5.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042042
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 10.3
Sample id Sample description nTPM
Hippocampus
nTPM: 9.1
2529 Female, age 94, left hemisphere 9.7
1855 Male, age 76, left hemisphere 9.5
2148 Female, age 91, left hemisphere 9.2
1911 Female, age 85, right hemisphere 8.9
1898 Male, age 80, left hemisphere 8.8
2621 Female, age 67, right hemisphere 8.2
Dentate gyrus
nTPM: 9.0
2528 Male, age 74, both hemispheres 10.7
2246 Female, age 85, both hemispheres 9.3
1927 Female, age 91, both hemispheres 9.2
2010 Male, age 76, both hemispheres 9.2
2531 Female, age 67, both hemispheres 8.4
2530 Female, age 94, left hemisphere 7.3
Entorhinal gyrus
nTPM: 9.2
1787 Male, age 76, left hemisphere 11.3
1938 Female, age 85, left hemisphere 10.1
2613 Female, age 94, left hemisphere 9.7
2764 Male, age 80, right hemisphere 8.8
2686 Male, age 75, right hemisphere 7.9
2117 Female, age 91, right hemisphere 7.2
Hippocampus, CA1
nTPM: 9.2
2082 Female, age 91, right hemisphere 11.6
2045 Male, age 76, both hemispheres 9.3
1873 Female, age 85, both hemispheres 8.8
2749 Male, age 80, left hemisphere 8.5
2527 Male, age 74, both hemispheres 7.7
Hippocampus, CA2
nTPM: 9.7
1892 Male, age 76, both hemispheres 11.7
2249 Male, age 74, both hemispheres 10.7
1940 Female, age 85, left hemisphere 9.9
2113 Female, age 91, right hemisphere 9.7
1963 Male, age 80, left hemisphere 8.1
2437 Female, age 94, left hemisphere 8.0
Hippocampus, CA3
nTPM: 9.4
2436 Male, age 74, both hemispheres 14.3
2620 Female, age 94, left hemisphere 10.0
1867 Male, age 76, both hemispheres 9.2
1891 Female, age 85, both hemispheres 8.9
2137 Male, age 80, left hemisphere 7.4
2861 Female, age 67, both hemispheres 6.6
Parahippocampal cortex
nTPM: 10.0
2532 Female, age 72, left hemisphere 11.0
1850 Male, age 80, both hemispheres 10.9
2622 Female, age 67, right hemisphere 10.6
1990 Female, age 91, right hemisphere 10.5
2693 Female, age 94, both hemispheres 10.4
2018 Male, age 76, both hemispheres 9.8
2692 Male, age 74, both hemispheres 9.6
2250 Female, age 67, right hemisphere 9.3
1933 Female, age 85, both hemispheres 9.1
2245 Female, age 91, both hemispheres 8.6
Perirhinal gyrus
nTPM: 10.3
1841 Female, age 85, right hemisphere 11.7
1794 Male, age 80, right hemisphere 11.4
1847 Female, age 91, left hemisphere 10.7
2848 Male, age 76, right hemisphere 9.2
2521 Female, age 94, right hemisphere 8.6
Subiculum
nTPM: 8.9
2438 Female, age 94, left hemisphere 9.9
2619 Male, age 74, both hemispheres 9.7
1977 Female, age 85, both hemispheres 9.2
2729 Female, age 91, right hemisphere 8.8
1901 Male, age 80, both hemispheres 8.2
2042 Male, age 76, both hemispheres 7.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 5.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.5
Samples: 197

Max nTPM: 11.1
Min nTPM: 1.3
Std nTPM: 2.0
Median nTPM: 5.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 11.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 10.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 10.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 10.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 9.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 9.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 9.5
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 9.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 9.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 9.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 9.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 6.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.1
FF:10153-102I9 76 years, female 7.1
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.1
Pig sample Sample description nTPM
Subiculum
nTPM: 9.2
Samples: 4

Max nTPM: 10.1
Min nTPM: 7.5
Sample A Female 7.5
Sample B Female 10.1
Sample C Male 9.1
Sample D Male 10.0
Dorsal hippocampus
nTPM: 9.4
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.4
Sample A Female 9.1
Sample B Female 8.4
Sample C Male 9.6
Sample D Male 10.3
Entorhinal cortex
nTPM: 11.1
Samples: 4

Max nTPM: 11.8
Min nTPM: 10.2
Sample A Female 10.6
Sample B Female 11.8
Sample C Male 10.2
Sample D Male 11.8
Ventral hippocampus
nTPM: 9.2
Samples: 4

Max nTPM: 10.0
Min nTPM: 8.1
Sample A Female 9.3
Sample B Female 10.0
Sample C Male 8.1
Sample D Male 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 5.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.1
Samples: 4

Max nTPM: 5.2
Min nTPM: 3.3
Sample A Male 3.8
Sample B Male 4.2
Sample C Female 5.2
Sample D Female 3.3
Hippocampal formation
nTPM: 5.4
Samples: 4

Max nTPM: 8.3
Min nTPM: 4.2
Sample A Male 4.4
Sample B Male 4.6
Sample C Female 4.2
Sample D Female 8.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
74427085 Antisense, RP_051206_03_A08, Mouse strain C57BL/6J (56 days, male) 0.0

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