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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IQGAP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
74.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
69.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
64.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
62.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
61.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
59.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
59.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
56.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
56.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
55.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
53.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
49.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
49.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
48.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
48.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
47.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
44.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
44.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
43.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
38.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
37.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
37.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
37.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
36.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
36.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
36.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
35.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
35.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
34.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
34.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
33.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
30.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
28.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
28.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
27.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
27.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
22.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
22.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
20.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
20.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
18.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
18.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
17.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
17.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
17.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
16.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
15.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
14.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
14.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
13.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
11.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
9.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
5.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IQGAP1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
136.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
109.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
109.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
106.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
105.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
101.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
100.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
100.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
99.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
99.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
97.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
97.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
97.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
96.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
95.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
93.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
92.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
92.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
91.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
89.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
89.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
88.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
87.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
87.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
86.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
86.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
86.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
85.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
84.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
84.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
84.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
83.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
82.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
82.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
82.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
81.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
81.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
81.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
81.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
80.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
80.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
79.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
79.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
79.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
78.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
78.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
77.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
77.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
77.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
77.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
77.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
76.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
76.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
76.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
76.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
75.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
74.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
74.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
73.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
73.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
71.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
71.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
71.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
71.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
71.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
70.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
70.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
70.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
70.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
69.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
69.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
69.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
68.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
68.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
68.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
68.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
68.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
68.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
68.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
67.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
67.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
67.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
67.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
67.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
66.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
66.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
66.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
66.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
65.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
65.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
65.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
65.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
65.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
65.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
65.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
65.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
65.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
65.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
65.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
64.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
64.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
64.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
64.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
64.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
63.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
63.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
63.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
63.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
63.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
63.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
63.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
62.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
62.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
62.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
62.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
62.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
62.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
61.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
61.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
61.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
61.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
61.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
61.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
61.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
60.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
60.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
60.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
60.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
59.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
59.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
59.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
59.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
59.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
59.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
58.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
58.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
58.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
57.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
57.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
57.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
57.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
56.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
56.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
56.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
56.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
56.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
56.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
56.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
55.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
55.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
55.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
55.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
55.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
54.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
54.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
54.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
54.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
54.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
54.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
54.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
54.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
53.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
53.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
53.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
53.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
53.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
53.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
53.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
53.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
52.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
52.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
52.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
52.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
52.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
52.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
52.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
52.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
52.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
52.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
52.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
52.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
52.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
52.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
51.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
51.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
51.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
51.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
51.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
51.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
51.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
51.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
51.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
51.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
51.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
51.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
51.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
51.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
51.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
51.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
51.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
51.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
51.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
50.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
50.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
50.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
49.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
49.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
49.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
49.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
48.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
48.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
48.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
48.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
48.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
48.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
47.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
47.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
47.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
47.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
47.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
47.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
47.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
47.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
47.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
46.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
46.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
46.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
46.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
46.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
46.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
46.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
46.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
46.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
45.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
45.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
45.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
45.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
45.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
44.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
44.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
43.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
43.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
43.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
43.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
43.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
43.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
43.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
42.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
42.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
42.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
42.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
42.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
42.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
42.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
42.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
42.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
41.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
41.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
41.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
41.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
41.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
41.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
41.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
41.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
41.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
41.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
41.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
41.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
41.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
40.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
40.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
39.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
39.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
39.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
39.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
39.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
39.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
39.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
39.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
39.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
38.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
38.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
38.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
38.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
38.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
38.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
38.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
38.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
37.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
37.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
37.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
37.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
37.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
37.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
37.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
36.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
36.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
36.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
36.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
36.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
35.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
35.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
35.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
34.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
34.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
33.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
33.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
33.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
33.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
33.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
33.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
33.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
33.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
33.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
33.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
33.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
32.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
32.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
32.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
32.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
32.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
32.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
32.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
32.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
32.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
31.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
31.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
31.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
31.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
31.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
31.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
31.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
31.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
31.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
31.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
31.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
30.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
30.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
30.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
30.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
30.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
30.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
30.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
30.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
30.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
30.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
29.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
29.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
29.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
29.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
29.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
29.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
29.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
29.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
28.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
28.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
28.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
28.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
28.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
28.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
28.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
28.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
27.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
27.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
27.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
27.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
27.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
27.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
26.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
26.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
26.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
26.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
26.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
26.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
25.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
25.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
25.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
25.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
25.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
24.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
24.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
24.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
24.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
24.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
23.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
23.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
23.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
23.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
23.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
23.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
22.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
22.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
22.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
22.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
22.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
21.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
21.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
20.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
20.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
20.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
20.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
19.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
19.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
19.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
18.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
18.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
17.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
17.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
16.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
16.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
16.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
15.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
15.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
14.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
14.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
14.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
14.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
13.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
13.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
13.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
13.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
12.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
12.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
12.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
11.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
10.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
8.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
6.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
6.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
3.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
3.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
2.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IQGAP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
61.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
116.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
114.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
106.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
93.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
92.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
91.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
89.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
88.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
88.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
85.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
85.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
85.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
84.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
84.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
84.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
83.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
82.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
81.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
81.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
81.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
79.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
79.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
78.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
77.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
77.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
77.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
76.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
76.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
75.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
75.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
75.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
74.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
74.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
74.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
74.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
72.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
72.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
71.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
71.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
70.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
70.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
70.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
70.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
69.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
69.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
69.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
68.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
68.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
68.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
68.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
67.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
66.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
66.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
65.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
65.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
64.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
63.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
61.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
61.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
61.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
60.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
60.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
58.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
57.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
57.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
55.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
54.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
52.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
52.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
51.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
51.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
51.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
50.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
48.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
46.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
45.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
44.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
43.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
41.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
41.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
38.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
36.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
33.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
33.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
30.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
29.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
28.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
27.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
26.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
25.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
20.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
19.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
17.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
9.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IQGAP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
111.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
108.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
105.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
100.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
97.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
92.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
92.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
88.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
87.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
83.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
82.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
79.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
79.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
77.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
75.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
75.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
73.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
72.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
72.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
71.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
69.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
69.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
68.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
66.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
65.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
64.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
61.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
61.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
59.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
58.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
56.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
56.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
55.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
55.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
53.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
53.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
53.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
51.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
51.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
51.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
50.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
49.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
48.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
48.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
47.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
47.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
46.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
45.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
45.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
44.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
44.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
44.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
44.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
43.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
42.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
42.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
42.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
41.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
40.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
39.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
39.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
38.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
38.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
38.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
38.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
38.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
37.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
37.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
37.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
37.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
36.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
36.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
35.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
35.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
34.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
34.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
34.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
33.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
33.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
32.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
32.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
32.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
32.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
32.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
32.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
31.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
31.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
31.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
31.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
31.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
30.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
30.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
30.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
30.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
29.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
29.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
28.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
28.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
28.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
27.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
26.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
26.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
26.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
26.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
26.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
26.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
25.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
25.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
25.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
25.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
24.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
24.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
24.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
24.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
24.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
24.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
24.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
24.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
24.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
24.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
23.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
23.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
23.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
22.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
22.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
22.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
21.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
21.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
21.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
20.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
20.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
20.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
20.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
20.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
19.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
19.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
19.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
18.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
18.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
18.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
18.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
18.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
18.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
18.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
18.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
18.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
18.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
17.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
16.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
16.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
16.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
16.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
16.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
16.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
15.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
15.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
14.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
14.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
14.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
13.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
13.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
13.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
13.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
12.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
12.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
12.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
11.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
10.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
10.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
10.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
9.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
9.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
9.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
8.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
8.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
8.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
7.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
7.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
7.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
7.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
6.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
5.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
5.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
4.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
3.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
3.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
3.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
3.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
3.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
3.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
2.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
2.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
2.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
2.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
2.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.9
CPT0084560003
Tumor
0.8
CPT0000640003
Tumor
0.7
CPT0001340003
Tumor
0.6
CPT0081880003
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0026410003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0086030003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0065690003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0009000003
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0065810003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0011240003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0012370003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0078990003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0012180003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0023350003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0007860003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0012640003
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0088690003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0011410003
Tumor
-0.2
CPT0088640003
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0002270011
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0086970003
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0001350001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0010170001
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0088970003
Tumor
-0.3
CPT0026420001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0088780001
Normal
-0.4
CPT0009080003
Normal
-0.4
CPT0066430001
Normal
-0.4
CPT0092800003
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0014350001
Normal
-0.4
CPT0006730001
Normal
-0.4
CPT0000790001
Normal
-0.4
CPT0023710001
Normal
-0.4
CPT0078530001
Normal
-0.4
CPT0089480003
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0086950003
Tumor
-0.4
CPT0006950001
Normal
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
