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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAMP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
65.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
123.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
123.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
114.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
113.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
111.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
100.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
100.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
95.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
92.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
91.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
91.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
89.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
86.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
86.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
81.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
78.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
78.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
77.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
76.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
76.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
76.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
72.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
71.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
71.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
71.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
70.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
70.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
70.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
70.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
70.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
69.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
68.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
67.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
66.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
66.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
64.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
63.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
61.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
58.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
58.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
57.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
57.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
57.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
55.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
52.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
50.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
49.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
49.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
48.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
47.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
44.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
44.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
42.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
40.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
39.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
33.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
32.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
31.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
29.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
25.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
20.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
14.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAMP2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
199.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
165.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
143.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
107.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
105.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
101.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
99.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
99.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
98.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
97.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
97.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
97.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
96.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
96.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
95.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
95.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
94.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
94.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
93.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
93.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
92.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
92.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
92.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
91.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
91.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
91.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
90.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
87.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
87.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
87.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
87.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
84.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
83.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
83.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
83.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
83.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
83.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
83.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
83.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
82.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
82.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
81.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
80.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
80.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
80.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
80.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
79.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
79.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
79.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
79.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
79.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
78.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
78.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
78.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
78.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
78.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
78.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
78.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
78.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
78.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
78.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
78.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
77.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
77.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
77.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
77.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
77.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
77.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
77.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
76.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
76.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
76.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
76.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
76.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
76.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
76.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
76.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
75.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
75.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
75.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
75.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
75.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
75.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
75.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
75.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
75.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
75.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
75.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
75.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
75.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
75.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
75.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
74.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
74.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
74.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
74.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
74.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
74.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
74.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
74.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
74.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
74.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
73.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
73.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
73.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
73.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
73.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
73.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
72.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
71.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
71.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
71.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
71.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
71.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
71.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
71.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
70.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
70.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
70.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
70.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
70.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
70.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
70.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
70.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
70.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
70.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
70.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
70.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
70.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
70.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
69.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
69.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
69.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
69.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
69.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
69.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
69.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
69.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
69.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
69.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
68.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
68.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
68.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
68.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
68.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
68.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
68.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
68.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
68.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
68.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
68.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
68.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
67.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
67.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
67.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
67.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
67.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
67.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
67.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
67.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
67.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
67.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
67.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
67.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
66.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
66.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
66.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
66.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
66.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
66.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
66.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
66.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
66.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
66.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
66.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
65.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
65.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
65.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
65.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
65.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
65.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
65.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
65.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
64.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
64.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
64.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
64.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
64.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
64.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
64.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
64.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
64.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
63.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
63.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
63.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
63.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
63.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
62.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
62.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
62.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
62.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
62.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
62.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
62.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
62.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
62.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
61.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
61.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
61.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
61.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
61.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
61.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
61.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
61.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
61.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
61.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
61.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
60.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
60.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
60.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
60.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
60.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
60.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
60.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
60.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
60.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
60.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
59.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
59.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
59.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
59.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
59.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
59.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
59.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
59.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
59.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
59.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
59.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
59.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
59.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
59.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
58.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
58.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
58.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
58.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
58.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
58.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
58.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
58.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
58.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
58.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
58.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
58.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
58.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
57.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
57.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
57.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
57.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
57.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
57.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
57.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
57.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
57.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
57.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
57.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
57.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
57.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
56.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
56.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
56.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
56.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
56.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
56.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
56.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
56.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
56.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
56.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
56.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
56.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
55.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
55.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
55.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
55.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
55.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
54.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
54.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
54.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
54.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
54.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
54.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
54.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
54.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
54.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
54.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
53.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
53.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
53.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
53.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
53.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
53.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
53.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
53.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
53.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
53.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
53.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
52.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
52.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
52.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
52.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
52.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
52.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
52.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
51.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
51.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
51.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
51.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
51.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
51.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
51.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
51.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
51.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
51.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
50.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
50.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
50.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
50.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
50.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
50.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
50.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
50.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
50.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
50.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
50.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
50.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
50.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
50.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
50.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
49.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
49.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
49.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
49.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
49.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
49.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
49.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
49.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
49.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
49.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
49.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
48.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
48.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
48.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
48.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
48.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
48.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
48.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
48.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
48.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
48.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
48.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
48.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
48.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
48.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
47.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
47.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
47.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
47.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
47.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
47.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
47.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
47.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
47.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
46.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
46.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
46.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
46.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
46.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
46.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
46.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
46.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
46.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
46.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
46.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
45.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
45.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
45.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
45.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
44.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
44.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
44.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
44.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
44.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
44.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
44.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
44.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
44.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
43.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
43.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
42.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
42.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
42.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
41.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
41.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
41.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
41.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
41.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
41.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
41.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
40.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
40.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
40.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
40.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
40.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
40.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
40.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
40.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
40.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
40.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
40.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
40.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
40.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
40.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
39.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
39.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
39.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
39.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
38.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
38.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
38.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
38.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
38.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
38.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
38.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
38.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
38.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
37.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
37.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
37.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
37.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
37.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
37.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
37.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
37.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
37.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
36.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
36.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
36.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
36.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
36.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
36.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
36.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
36.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
36.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
35.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
35.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
35.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
34.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
34.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
34.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
34.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
34.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
33.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
33.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
32.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
32.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
32.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
32.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
32.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
31.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
31.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
31.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
31.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
31.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
30.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
30.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
29.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
29.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
29.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
28.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
27.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
27.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
26.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
25.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
25.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
25.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
25.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
25.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
25.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
25.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
25.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
24.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
24.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
24.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
24.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
24.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
23.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
23.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
22.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
22.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
21.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
20.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
20.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
20.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
19.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
19.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
19.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
18.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
18.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
17.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
15.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
15.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
15.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
13.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
13.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
13.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
11.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
10.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
9.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAMP2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
102.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
96.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
84.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
79.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
77.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
76.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
75.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
74.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
74.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
74.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
71.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
70.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
69.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
68.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
67.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
67.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
66.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
66.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
65.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
65.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
64.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
64.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
63.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
63.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
62.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
62.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
62.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
61.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
61.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
60.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
59.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
59.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
59.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
59.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
59.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
58.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
58.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
58.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
58.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
57.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
56.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
56.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
55.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
55.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
53.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
53.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
53.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
52.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
52.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
52.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
52.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
51.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
51.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
50.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
49.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
49.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
48.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
48.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
47.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
47.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
47.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
47.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
47.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
46.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
46.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
45.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
45.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
44.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
44.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
44.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
44.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
42.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
42.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
42.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
41.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
39.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
37.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
36.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
36.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
35.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
33.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
33.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
33.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
32.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
31.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
31.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
30.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
30.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
30.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
28.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
25.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
25.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
24.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
24.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
23.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAMP2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
58.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
153.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
150.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
132.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
124.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
120.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
116.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
116.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
115.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
110.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
109.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
107.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
106.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
106.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
105.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
103.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
103.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
102.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
102.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
101.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
101.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
100.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
100.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
100.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
99.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
99.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
97.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
96.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
93.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
93.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
93.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
92.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
90.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
90.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
90.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
89.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
88.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
88.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
88.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
88.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
88.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
87.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
86.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
86.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
86.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
86.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
84.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
84.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
84.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
84.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
84.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
84.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
83.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
83.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
82.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
82.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
81.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
81.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
80.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
79.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
79.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
78.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
78.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
78.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
78.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
78.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
78.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
77.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
76.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
76.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
76.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
75.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
75.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
74.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
74.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
73.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
73.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
72.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
72.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
72.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
71.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
71.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
71.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
71.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
71.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
71.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
70.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
70.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
69.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
69.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
68.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
67.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
67.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
67.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
67.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
66.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
66.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
66.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
66.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
66.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
65.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
65.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
65.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
65.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
64.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
64.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
64.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
64.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
64.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
64.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
63.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
63.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
63.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
63.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
63.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
63.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
62.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
62.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
62.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
61.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
61.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
61.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
61.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
61.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
61.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
60.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
59.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
59.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
58.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
58.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
58.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
58.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
57.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
57.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
57.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
57.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
57.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
56.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
56.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
55.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
55.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
55.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
55.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
55.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
54.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
54.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
53.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
53.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
53.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
53.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
52.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
52.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
52.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
52.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
52.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
52.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
52.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
52.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
51.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
51.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
51.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
51.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
51.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
51.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
51.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
50.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
49.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
49.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
49.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
49.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
48.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
48.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
48.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
48.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
48.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
48.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
48.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
48.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
47.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
47.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
46.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
46.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
46.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
46.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
45.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
45.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
45.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
45.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
45.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
44.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
44.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
44.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
44.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
44.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
44.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
44.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
43.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
43.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
43.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
43.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
43.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
42.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
42.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
41.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
41.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
41.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
41.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
40.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
40.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
40.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
40.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
40.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
39.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
39.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
39.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
39.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
38.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
38.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
38.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
37.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
37.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
37.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
36.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
36.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
36.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
35.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
35.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
34.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
34.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
34.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
34.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
33.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
33.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
33.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
33.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
32.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
32.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
31.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
31.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
30.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
30.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
30.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
29.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
29.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
28.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
28.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
26.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
25.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
25.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
25.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
25.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
25.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
24.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
24.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
23.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
23.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
23.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
22.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
21.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
21.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
21.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
21.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
21.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
19.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
19.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
18.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
16.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
15.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
15.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
12.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
1.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0014450004
Tumor
0.9
CPT0078800003
Tumor
0.7
CPT0007320003
Tumor
0.7
CPT0088550004
Tumor
0.7
CPT0079180003
Tumor
0.6
CPT0001180009
Tumor
0.5
CPT0076350001
Normal
0.5
CPT0086820003
Tumor
0.5
CPT0078830003
Tumor
0.4
CPT0089480003
Normal
0.4
CPT0015730003
Tumor
0.4
CPT0065450001
Normal
0.4
CPT0079480003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0010110003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0006950001
Normal
0.3
CPT0023710001
Normal
0.3
CPT0001220008
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0000790001
Normal
0.3
CPT0088480003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0019130003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0010170001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0025110003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0081880003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0020120003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0092730003
Tumor
0.2
CPT0086970003
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0015810003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0007470001
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0066430001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0066470004
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0088570001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0088970003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0075130003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0088500001
Normal
-0.2
CPT0088760003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0021240003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0025610001
Normal
-0.2
CPT0088630003
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0076330003
Tumor
-0.3
CPT0012770003
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0065930003
Tumor
-0.3
CPT0009080003
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0079300001
Normal
-0.3
CPT0019990003
Tumor
-0.3
CPT0012920003
Normal
-0.4
CPT0024680001
Normal
-0.4
CPT0012640003
Normal
-0.4
CPT0007860003
Tumor
-0.4
CPT0001340003
Tumor
-0.4
CPT0069000003
Tumor
-0.5
CPT0009020003
Normal
-0.5
CPT0012570003
Normal
-0.5
CPT0017850003
Tumor
-0.5
CPT0092190003
Normal
-0.6
CPT0084560003
Tumor
-0.6
CPT0011240003
Tumor
-0.6
CPT0017410003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
