HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:12.8 nTPM
HPA Brain:48.1 nTPM
GTEx:12.8 nTPM
FANTOM5:39.1 Scaled Tags Per Million
Pig:70.9 nTPM
Mouse:40.3 nTPM
Allen mouse:11.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008126
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 48.1
Sample id Sample description nTPM
Hippocampus
nTPM: 46.6
2148 Female, age 91, left hemisphere 49.3
1898 Male, age 80, left hemisphere 47.4
2621 Female, age 67, right hemisphere 46.8
1855 Male, age 76, left hemisphere 46.6
1911 Female, age 85, right hemisphere 46.4
2529 Female, age 94, left hemisphere 43.4
Dentate gyrus
nTPM: 43.9
1927 Female, age 91, both hemispheres 47.0
2010 Male, age 76, both hemispheres 46.2
2531 Female, age 67, both hemispheres 46.2
2530 Female, age 94, left hemisphere 44.2
2246 Female, age 85, both hemispheres 43.7
2528 Male, age 74, both hemispheres 36.2
Entorhinal gyrus
nTPM: 45.0
2613 Female, age 94, left hemisphere 53.1
2686 Male, age 75, right hemisphere 48.5
1938 Female, age 85, left hemisphere 46.0
2764 Male, age 80, right hemisphere 41.5
2117 Female, age 91, right hemisphere 41.3
1787 Male, age 76, left hemisphere 39.6
Hippocampus, CA1
nTPM: 47.1
2749 Male, age 80, left hemisphere 56.8
1873 Female, age 85, both hemispheres 47.8
2527 Male, age 74, both hemispheres 47.4
2082 Female, age 91, right hemisphere 42.9
2045 Male, age 76, both hemispheres 40.3
Hippocampus, CA2
nTPM: 44.5
1892 Male, age 76, both hemispheres 52.2
1963 Male, age 80, left hemisphere 49.0
2437 Female, age 94, left hemisphere 45.3
2113 Female, age 91, right hemisphere 40.5
1940 Female, age 85, left hemisphere 40.2
2249 Male, age 74, both hemispheres 39.8
Hippocampus, CA3
nTPM: 44.5
2137 Male, age 80, left hemisphere 49.2
2620 Female, age 94, left hemisphere 47.2
2861 Female, age 67, both hemispheres 46.2
1891 Female, age 85, both hemispheres 42.7
1867 Male, age 76, both hemispheres 41.1
2436 Male, age 74, both hemispheres 40.7
Parahippocampal cortex
nTPM: 46.3
2532 Female, age 72, left hemisphere 52.2
2245 Female, age 91, both hemispheres 50.7
1850 Male, age 80, both hemispheres 50.1
2622 Female, age 67, right hemisphere 48.0
2693 Female, age 94, both hemispheres 47.1
1933 Female, age 85, both hemispheres 44.1
2250 Female, age 67, right hemisphere 43.7
1990 Female, age 91, right hemisphere 43.1
2692 Male, age 74, both hemispheres 42.4
2018 Male, age 76, both hemispheres 41.3
Perirhinal gyrus
nTPM: 48.1
1841 Female, age 85, right hemisphere 53.2
2848 Male, age 76, right hemisphere 48.5
2521 Female, age 94, right hemisphere 46.7
1794 Male, age 80, right hemisphere 46.1
1847 Female, age 91, left hemisphere 46.1
Subiculum
nTPM: 43.5
2438 Female, age 94, left hemisphere 49.1
1901 Male, age 80, both hemispheres 46.9
1977 Female, age 85, both hemispheres 44.5
2619 Male, age 74, both hemispheres 44.5
2729 Female, age 91, right hemisphere 39.0
2042 Male, age 76, both hemispheres 36.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.8
Samples: 197

Max nTPM: 22.2
Min nTPM: 6.1
Std nTPM: 2.9
Median nTPM: 12.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 22.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 21.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 19.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 19.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 19.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 19.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 19.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 19.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 19.2
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 19.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 18.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 39.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.1
FF:10169-103B7 60 years, female 46.7
FF:10153-102I9 76 years, female 31.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 70.9
Pig sample Sample description nTPM
Subiculum
nTPM: 64.6
Samples: 4

Max nTPM: 81.0
Min nTPM: 55.1
Sample A Female 81.0
Sample B Female 60.8
Sample C Male 61.6
Sample D Male 55.1
Dorsal hippocampus
nTPM: 65.4
Samples: 4

Max nTPM: 72.9
Min nTPM: 52.4
Sample A Female 72.9
Sample B Female 71.2
Sample C Male 65.1
Sample D Male 52.4
Entorhinal cortex
nTPM: 70.9
Samples: 4

Max nTPM: 73.7
Min nTPM: 63.9
Sample A Female 73.3
Sample B Female 72.6
Sample C Male 73.7
Sample D Male 63.9
Ventral hippocampus
nTPM: 61.1
Samples: 4

Max nTPM: 71.9
Min nTPM: 51.2
Sample A Female 56.3
Sample B Female 51.2
Sample C Male 65.1
Sample D Male 71.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 40.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.4
Samples: 4

Max nTPM: 42.8
Min nTPM: 37.7
Sample A Male 40.2
Sample B Male 40.7
Sample C Female 37.7
Sample D Female 42.8
Hippocampal formation
nTPM: 40.0
Samples: 4

Max nTPM: 43.5
Min nTPM: 35.6
Sample A Male 35.6
Sample B Male 43.1
Sample C Female 43.5
Sample D Female 37.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.0
323171 Antisense, RP_040617_02_A05, Mouse strain C57BL/6J (56 days, male) 11.0
357093 Antisense, RP_040617_02_A05, Mouse strain C57BL/6J (56 days, male) 7.3

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