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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COMMD4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
67.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
175.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
132.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
126.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
125.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
125.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
108.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
107.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
105.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
104.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
102.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
101.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
100.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
97.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
96.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
93.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
92.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
90.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
90.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
89.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
89.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
88.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
86.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
86.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
85.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
85.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
85.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
85.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
84.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
79.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
77.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
77.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
77.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
77.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
76.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
76.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
75.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
75.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
75.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
68.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
62.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
60.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
57.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
56.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
56.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
55.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
55.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
48.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
43.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
43.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
36.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
21.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
16.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
15.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
11.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
8.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
7.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COMMD4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
56.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
159.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
130.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
126.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
113.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
113.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
112.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
111.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
102.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
101.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
100.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
97.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
97.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
94.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
93.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
92.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
91.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
90.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
90.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
90.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
89.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
89.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
89.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
88.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
87.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
87.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
87.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
86.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
86.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
85.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
85.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
85.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
84.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
83.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
83.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
83.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
82.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
82.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
82.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
82.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
81.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
81.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
80.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
80.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
79.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
78.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
78.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
78.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
78.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
77.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
77.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
77.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
76.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
76.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
76.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
76.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
76.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
76.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
75.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
75.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
75.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
75.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
75.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
75.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
74.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
74.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
74.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
74.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
74.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
73.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
73.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
73.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
73.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
73.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
72.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
72.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
72.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
72.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
72.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
72.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
72.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
72.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
71.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
71.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
71.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
71.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
71.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
70.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
70.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
70.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
70.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
70.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
70.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
70.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
70.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
69.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
69.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
69.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
69.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
69.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
69.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
68.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
68.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
68.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
68.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
68.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
67.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
67.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
67.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
67.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
67.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
67.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
67.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
67.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
66.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
66.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
66.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
66.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
66.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
65.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
65.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
65.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
65.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
64.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
64.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
64.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
64.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
64.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
64.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
64.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
64.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
63.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
63.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
63.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
63.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
63.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
63.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
63.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
63.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
63.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
63.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
63.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
63.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
63.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
63.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
63.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
63.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
62.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
62.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
62.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
62.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
62.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
62.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
62.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
62.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
62.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
62.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
62.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
62.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
62.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
61.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
61.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
61.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
61.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
61.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
61.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
61.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
61.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
61.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
61.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
61.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
60.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
60.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
60.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
60.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
60.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
60.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
60.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
60.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
60.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
60.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
59.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
59.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
59.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
59.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
59.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
59.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
59.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
59.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
59.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
59.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
59.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
59.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
59.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
59.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
59.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
58.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
58.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
58.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
58.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
58.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
58.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
58.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
58.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
58.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
58.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
58.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
58.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
58.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
58.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
58.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
58.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
58.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
58.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
58.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
57.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
57.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
57.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
57.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
57.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
57.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
57.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
57.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
57.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
57.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
57.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
56.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
56.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
56.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
56.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
56.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
56.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
56.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
56.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
56.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
56.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
56.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
56.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
56.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
56.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
56.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
56.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
56.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
55.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
55.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
55.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
55.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
55.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
55.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
55.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
55.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
55.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
55.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
55.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
55.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
55.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
54.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
54.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
54.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
54.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
54.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
54.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
54.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
54.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
54.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
54.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
54.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
54.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
54.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
54.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
54.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
54.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
53.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
53.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
53.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
53.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
53.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
53.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
53.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
53.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
53.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
53.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
52.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
52.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
52.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
52.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
52.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
52.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
52.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
52.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
52.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
52.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
52.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
52.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
52.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
52.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
52.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
52.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
52.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
52.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
52.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
52.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
51.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
51.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
51.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
51.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
51.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
51.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
51.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
51.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
51.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
51.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
50.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
50.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
50.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
50.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
50.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
50.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
50.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
50.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
50.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
50.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
50.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
50.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
50.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
49.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
49.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
49.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
49.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
49.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
49.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
49.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
49.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
49.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
49.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
49.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
49.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
49.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
49.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
48.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
48.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
48.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
48.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
48.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
48.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
48.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
48.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
48.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
48.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
47.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
47.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
47.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
47.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
47.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
47.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
47.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
47.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
47.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
47.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
47.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
47.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
47.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
47.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
47.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
47.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
47.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
47.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
46.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
46.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
46.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
46.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
46.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
46.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
46.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
46.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
46.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
46.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
46.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
46.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
46.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
45.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
45.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
45.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
45.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
45.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
45.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
45.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
45.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
45.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
45.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
45.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
45.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
45.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
45.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
45.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
44.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
44.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
44.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
44.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
44.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
44.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
44.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
44.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
44.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
44.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
43.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
43.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
43.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
43.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
43.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
43.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
43.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
43.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
43.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
43.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
43.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
43.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
42.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
42.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
42.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
42.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
42.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
42.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
42.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
42.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
42.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
42.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
42.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
42.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
42.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
41.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
41.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
41.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
41.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
41.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
41.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
41.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
41.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
41.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
41.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
40.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
40.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
40.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
40.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
40.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
40.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
40.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
40.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
40.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
40.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
39.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
39.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
39.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
39.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
39.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
39.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
38.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
38.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
38.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
38.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
38.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
38.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
38.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
38.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
38.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
37.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
37.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
37.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
37.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
37.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
37.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
37.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
37.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
37.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
37.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
36.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
36.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
36.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
36.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
36.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
35.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
35.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
35.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
35.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
35.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
34.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
34.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
34.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
34.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
34.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
34.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
33.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
33.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
33.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
32.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
32.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
32.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
32.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
31.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
31.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
31.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
30.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
30.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
29.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
29.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
29.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
28.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
28.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
27.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
26.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
25.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
24.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
24.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
23.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
23.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
22.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
20.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
16.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
6.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COMMD4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
102.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
93.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
90.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
81.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
79.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
75.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
73.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
72.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
71.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
69.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
69.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
69.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
65.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
65.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
65.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
65.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
61.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
61.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
61.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
61.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
60.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
60.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
60.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
59.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
59.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
58.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
58.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
58.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
57.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
57.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
56.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
56.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
56.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
55.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
55.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
55.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
54.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
54.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
54.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
54.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
53.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
53.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
52.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
52.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
52.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
52.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
52.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
51.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
51.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
51.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
50.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
50.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
50.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
50.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
49.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
49.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
49.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
48.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
48.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
48.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
48.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
48.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
48.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
47.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
47.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
47.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
46.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
46.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
45.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
45.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
45.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
45.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
45.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
44.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
44.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
44.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
44.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
43.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
42.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
42.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
42.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
40.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
40.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
40.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
40.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
39.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
39.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
38.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
34.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
33.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
33.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
33.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
32.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
31.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
26.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
26.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
23.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
20.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COMMD4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
82.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
393.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
314.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
209.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
207.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
196.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
195.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
182.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
176.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
161.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
161.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
159.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
157.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
154.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
150.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
150.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
149.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
148.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
146.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
146.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
144.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
144.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
142.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
140.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
139.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
139.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
138.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
138.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
130.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
129.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
125.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
125.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
125.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
124.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
123.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
122.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
122.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
120.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
119.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
118.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
117.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
117.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
117.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
116.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
116.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
116.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
114.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
114.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
113.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
113.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
113.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
113.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
112.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
112.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
112.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
112.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
111.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
110.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
110.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
109.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
109.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
107.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
107.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
107.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
107.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
107.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
106.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
106.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
105.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
105.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
105.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
104.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
104.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
104.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
104.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
103.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
103.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
103.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
103.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
103.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
102.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
102.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
102.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
102.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
102.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
102.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
102.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
100.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
100.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
100.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
100.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
100.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
99.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
99.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
98.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
98.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
97.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
96.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
95.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
95.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
95.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
95.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
95.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
94.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
94.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
94.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
93.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
92.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
92.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
92.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
92.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
91.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
91.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
91.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
91.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
91.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
91.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
90.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
90.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
90.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
89.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
89.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
89.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
89.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
88.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
88.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
88.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
88.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
88.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
88.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
87.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
87.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
87.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
87.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
86.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
85.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
85.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
84.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
84.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
84.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
83.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
83.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
83.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
83.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
83.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
83.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
83.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
82.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
81.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
81.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
81.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
81.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
81.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
81.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
80.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
80.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
80.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
80.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
79.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
79.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
79.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
79.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
79.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
79.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
79.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
78.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
78.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
78.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
77.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
77.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
77.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
76.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
76.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
76.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
76.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
76.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
76.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
76.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
75.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
75.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
75.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
75.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
74.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
74.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
74.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
74.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
74.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
73.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
73.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
73.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
72.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
71.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
71.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
70.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
69.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
68.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
68.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
68.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
67.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
67.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
66.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
66.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
65.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
64.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
64.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
64.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
63.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
63.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
63.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
62.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
62.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
62.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
61.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
61.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
60.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
60.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
59.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
59.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
59.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
58.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
58.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
57.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
57.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
57.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
57.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
56.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
56.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
55.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
54.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
53.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
53.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
53.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
51.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
50.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
50.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
49.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
45.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
45.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
41.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
39.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
36.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
36.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
34.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
31.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
30.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
24.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
18.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
17.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
15.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
13.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
11.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
11.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
8.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
7.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
4.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
4.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
3.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078800003
Tumor
0.8
CPT0009080003
Normal
0.6
CPT0001350001
Normal
0.6
CPT0026420001
Normal
0.6
CPT0088920001
Normal
0.6
CPT0088710001
Normal
0.6
CPT0006950001
Normal
0.6
CPT0078840001
Normal
0.6
CPT0082010001
Normal
0.6
CPT0012770003
Normal
0.5
CPT0066430001
Normal
0.5
CPT0001190001
Normal
0.5
CPT0076350001
Normal
0.5
CPT0079430001
Normal
0.5
CPT0088570001
Normal
0.5
CPT0088780001
Normal
0.5
CPT0012570003
Normal
0.5
CPT0012090003
Normal
0.5
CPT0081620001
Normal
0.4
CPT0063640001
Normal
0.4
CPT0078670001
Normal
0.4
CPT0092310003
Normal
0.4
CPT0065450001
Normal
0.4
CPT0025060001
Normal
0.4
CPT0077500001
Normal
0.4
CPT0000790001
Normal
0.4
CPT0006730001
Normal
0.4
CPT0014350001
Normal
0.4
CPT0000890001
Normal
0.4
CPT0023710001
Normal
0.4
CPT0077140001
Normal
0.4
CPT0023360001
Normal
0.4
CPT0089040001
Normal
0.4
CPT0086370003
Normal
0.3
CPT0079000001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0086890003
Normal
0.3
CPT0025610001
Normal
0.3
CPT0010170001
Normal
0.3
CPT0017450001
Normal
0.3
CPT0024680001
Normal
0.3
CPT0092740003
Normal
0.3
CPT0092800003
Normal
0.3
CPT0006530001
Normal
0.3
CPT0075570001
Normal
0.3
CPT0002270011
Tumor
0.3
CPT0007470001
Normal
0.3
CPT0000660001
Normal
0.3
CPT0012920003
Normal
0.2
CPT0087050003
Normal
0.2
CPT0018250001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0078940001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0012290003
Normal
0.2
CPT0079180003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0020020001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0075170001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0001510001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0001180009
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0002370001
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0078660003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0079230003
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0012280003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0014160003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0086950003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0088550004
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0012180003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0011240003
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0086820003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0077110003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0001260009
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0077310003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0092160003
Tumor
-0.3
CPT0069000003
Tumor
-0.3
CPT0001340003
Tumor
-0.3
CPT0017410003
Tumor
-0.3
CPT0065750003
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0076330003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0012900004
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0075130003
Tumor
-0.4
CPT0006900003
Tumor
-0.4
CPT0079300001
Normal
-0.4
CPT0079410003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0085670003
Tumor
-0.4
CPT0088690003
Tumor
-0.4
CPT0012550003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0075720003
Tumor
-0.4
CPT0009000003
Tumor
-0.4
CPT0092730003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0015810003
Tumor
-0.4
CPT0023690003
Tumor
-0.4
CPT0015910003
Tumor
-0.4
CPT0025350003
Tumor
-0.4
CPT0079380003
Tumor
-0.5
CPT0010160003
Tumor
-0.5
CPT0063630003
Tumor
-0.5
CPT0075560003
Tumor
-0.5
CPT0069160003
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0079510001
Normal
-0.5
CPT0065690003
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0077490003
Tumor
-0.6
CPT0063320003
Tumor
-0.6
CPT0086030003
Tumor
-0.6
CPT0081880003
Tumor
-0.7
CPT0089020003
Tumor
-0.7
CPT0088900003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
