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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
13.1
nTPM
GTEx:
13.1
nTPM
FANTOM5:
9.8
Scaled Tags Per Million
Pig:
15.3
nTPM
Mouse:
42.1
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
13.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 13.1
Samples: 105
Max nTPM: 32.7
Min nTPM: 0.9
Std nTPM: 6.6
Median nTPM:
163_1
78 years, male
32.7
352_1
62 years, male
28.8
394_1
75 years, female
27.8
319_1
81 years, male
26.5
503_1
68 years, male
26.0
354_1
81 years, female
25.8
320_1
89 years, female
24.6
377_1
82 years, female
23.6
172_1
72 years, female
22.5
425_1
59 years, female
22.2
218_1
71 years, female
21.8
506_1
65 years, male
21.6
321_1
62 years, female
21.1
349_1
83 years, male
20.9
177_1
74 years, male
20.6
376_1
75 years, female
20.6
356_1
87 years, female
19.9
351_1
91 years, male
19.5
243_1
75 years, male
19.3
386_1
76 years, male
19.1
251_1
78 years, male
19.0
452_1
88 years, female
19.0
384_1
83 years, male
18.7
353_1
82 years, female
18.4
293_1
68 years, female
18.1
292_1
71 years, male
17.9
286_1
68 years, female
17.8
189_1
76 years, male
17.7
406_1
79 years, male
17.0
517_1
88 years, male
16.9
2_1
77 years, female
16.0
229_1
69 years, female
15.9
480_1
63 years, male
15.5
217_1
76 years, male
15.4
526_1
61 years, male
15.3
115_1
83 years, male
14.9
350_1
84 years, female
14.8
18_1
88 years, male
14.7
291_1
76 years, male
14.6
295_1
61 years, female
14.4
404_1
82 years, female
14.4
153_1
70 years, female
14.3
335_1
73 years, female
14.0
6_1
73 years, female
13.6
4_1
88 years, female
13.5
355_1
70 years, female
13.2
447_1
81 years, male
13.2
264_1
73 years, female
12.9
389_1
86 years, female
12.9
126_1
63 years, male
12.8
316_1
62 years, male
12.8
375_1
74 years, female
12.8
379_1
60 years, male
12.7
237_1
82 years, male
12.3
518_1
75 years, female
12.3
311_1
78 years, male
11.9
348_1
84 years, male
11.7
468_1
89 years, male
11.6
17_1
71 years, male
11.5
35_1
74 years, female
11.5
246_1
77 years, male
11.5
499_1
55 years, female
11.5
173_1
67 years, male
11.4
266_1
85 years, male
11.1
322_1
76 years, male
10.9
405_1
91 years, male
10.9
9_1
66 years, female
10.8
317_1
60 years, male
10.7
307_1
66 years, female
10.6
254_1
77 years, female
10.5
145_1
84 years, male
10.2
109_1
81 years, female
10.0
318_1
68 years, male
9.6
396_1
62 years, male
9.6
265_1
87 years, male
9.4
117_1
61 years, male
9.1
81_1
67 years, male
8.8
120_1
70 years, female
8.6
288_1
66 years, female
8.4
314_1
67 years, male
7.8
324_1
76 years, male
7.4
495_1
57 years, female
7.2
308_1
70 years, female
7.1
313_1
79 years, female
6.9
99_1
64 years, male
6.4
41_1
94 years, female
6.3
162_1
79 years, female
6.3
139_1
64 years, female
6.1
42_1
85 years, male
6.0
137_1
83 years, male
5.7
315_1
62 years, female
5.5
347_1
72 years, male
5.4
142_1
61 years, female
4.8
32_1
67 years, male
4.7
149_1
88 years, male
4.4
415_1
77 years, female
4.4
501_1
88 years, male
4.4
119_1
70 years, female
4.3
466_1
57 years, female
4.3
89_1
63 years, male
3.6
414_1
84 years, female
3.0
413_1
59 years, female
2.8
43_1
64 years, female
2.6
491_1
89 years, female
1.6
490_1
67 years, female
0.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
