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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS37B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
73.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
67.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
65.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
63.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
56.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
51.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
47.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
47.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
43.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
42.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
42.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
40.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
39.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
37.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
36.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
36.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
35.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
35.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
34.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
33.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
32.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
31.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
31.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
30.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
29.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
29.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
29.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
28.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
28.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
28.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
27.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
26.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
26.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
26.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
26.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
25.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
25.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
25.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
24.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
24.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
23.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
23.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
23.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
23.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
23.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
22.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
22.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
21.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
21.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
21.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
18.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
18.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
17.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
16.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
16.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
15.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
13.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
12.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS37B is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
53.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
45.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
44.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
44.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
42.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
42.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
42.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
40.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
38.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
38.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
37.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
37.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
36.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
36.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
35.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
35.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
34.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
34.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
33.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
33.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
31.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
31.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
31.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
31.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
30.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
29.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
29.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
28.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
28.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
27.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
27.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
27.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
27.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
27.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
27.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
26.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
26.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
26.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
25.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
25.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
24.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
24.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
24.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
24.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
24.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
24.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
24.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
24.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
24.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
23.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
23.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
23.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
23.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
23.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
23.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
22.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
22.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
22.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
22.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
22.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
21.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
21.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
21.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
21.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
21.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
21.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
21.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
21.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
21.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
21.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
21.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
20.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
20.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
20.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
20.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
20.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
20.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
20.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
20.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
20.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
20.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
19.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
19.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
19.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
19.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
19.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
19.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
19.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
19.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
19.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
19.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
18.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
18.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
18.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
18.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
18.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
18.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
18.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
18.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
18.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
18.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
18.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
17.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
17.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
17.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
17.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
17.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
17.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
17.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
17.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
17.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
17.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
17.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
17.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
17.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
17.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
17.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
17.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
17.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
17.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
16.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
16.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
16.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
16.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
16.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
16.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
16.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
16.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
16.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
16.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
16.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
16.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
16.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
16.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
16.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
16.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
16.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
16.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
15.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
15.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
15.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
15.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
15.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
15.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
15.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
15.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
15.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
15.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
15.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
15.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
15.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
15.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
15.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
15.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
15.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
14.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
14.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
14.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
14.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
14.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
14.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
14.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
14.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
14.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
13.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
13.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
13.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
13.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
13.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
13.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
13.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
13.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
13.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
13.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
13.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
13.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
13.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
13.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
13.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
12.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
12.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
12.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
12.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
12.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
12.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
12.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
12.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
12.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
12.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
12.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
12.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
12.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
12.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
12.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
12.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
12.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
12.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
12.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
12.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
11.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
11.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
11.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
11.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
11.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
11.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
11.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
11.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
11.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
11.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
11.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
11.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
11.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
11.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
11.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
10.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
10.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
10.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
10.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
10.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
10.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
10.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
10.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
10.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
10.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
10.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
10.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
10.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
10.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
10.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
10.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
9.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
9.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
9.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
9.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
9.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
9.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
9.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
9.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
9.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
9.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
9.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
9.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
9.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
9.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
9.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
9.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
8.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
8.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
8.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
8.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
8.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
8.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
8.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
8.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
7.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
7.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
7.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
7.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
7.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
7.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
7.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
7.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
7.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
7.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
7.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
6.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
6.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
6.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
6.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
6.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
6.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
5.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
5.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
5.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
4.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS37B is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
32.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
29.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
29.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
25.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
25.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
24.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
23.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
23.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
21.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
21.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
21.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
21.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
20.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
20.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
20.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
20.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
19.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
17.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
17.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
17.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
16.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
16.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
16.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
16.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
16.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
16.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
15.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
15.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
15.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
15.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
14.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
14.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
14.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
14.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
14.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
14.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
13.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
13.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
13.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
13.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
13.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
12.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
12.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
12.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
12.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
12.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
12.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
11.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
11.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
11.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
11.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
10.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
10.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
10.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
10.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
10.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
10.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
10.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
9.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
9.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
9.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
9.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
8.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
8.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
8.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
8.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
8.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
8.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
8.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
7.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VPS37B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
79.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
75.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
73.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
66.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
64.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
63.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
58.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
55.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
54.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
54.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
52.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
52.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
50.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
47.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
46.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
44.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
44.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
43.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
43.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
42.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
42.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
42.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
41.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
40.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
39.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
39.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
39.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
37.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
37.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
37.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
36.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
36.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
36.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
35.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
35.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
35.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
35.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
34.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
34.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
34.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
34.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
34.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
34.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
34.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
33.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
33.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
33.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
32.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
32.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
32.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
32.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
32.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
32.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
31.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
31.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
31.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
31.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
31.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
31.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
31.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
30.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
30.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
30.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
29.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
29.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
29.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
29.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
29.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
29.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
29.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
28.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
28.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
28.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
28.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
27.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
27.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
27.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
27.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
27.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
27.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
27.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
27.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
27.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
27.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
27.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
26.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
26.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
26.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
26.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
26.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
26.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
26.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
26.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
26.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
25.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
25.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
25.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
25.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
25.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
25.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
24.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
24.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
24.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
24.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
24.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
24.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
24.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
23.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
23.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
23.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
23.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
23.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
23.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
22.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
22.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
22.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
22.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
22.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
22.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
22.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
22.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
21.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
21.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
21.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
21.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
21.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
21.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
21.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
21.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
21.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
21.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
20.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
20.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
20.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
20.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
20.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
20.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
20.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
19.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
19.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
19.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
19.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
19.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
19.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
19.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
19.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
19.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
18.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
18.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
18.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
18.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
18.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
18.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
17.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
17.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
17.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
17.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
17.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
17.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
17.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
17.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
16.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
16.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
16.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
16.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
16.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
16.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
15.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
15.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
15.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
15.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
15.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
15.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
15.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
15.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
15.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
15.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
15.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
15.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
15.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
14.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
14.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
14.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
14.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
14.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
14.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
14.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
13.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
13.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
13.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
13.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
13.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
13.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
13.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
12.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
12.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
12.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
12.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
12.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
12.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
12.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
12.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
12.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
11.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
11.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
11.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
11.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
10.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
10.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
10.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
10.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
10.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
9.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
9.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
9.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
8.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
8.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
8.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
8.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
7.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
5.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
4.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.3
CPT0024680001
Normal
1.1
CPT0012640003
Normal
0.7
CPT0078660003
Tumor
0.7
CPT0001180009
Tumor
0.6
CPT0010120001
Normal
0.5
CPT0077500001
Normal
0.5
CPT0011240003
Tumor
0.5
CPT0012290003
Normal
0.5
CPT0076330003
Tumor
0.4
CPT0014470001
Normal
0.4
CPT0002370001
Normal
0.4
CPT0018250001
Normal
0.4
CPT0063330001
Normal
0.4
CPT0079300001
Normal
0.3
CPT0069190001
Normal
0.3
CPT0079510001
Normal
0.3
CPT0092290003
Tumor
0.3
CPT0075170001
Normal
0.3
CPT0064370003
Tumor
0.3
CPT0066520001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0012920003
Normal
0.3
CPT0088550004
Tumor
0.3
CPT0009020003
Normal
0.3
CPT0066480003
Tumor
0.3
CPT0079410003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0001270001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0014130001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0024670003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0012090003
Normal
0.2
CPT0000890001
Normal
0.2
CPT0000780007
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0078840001
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0069010001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0088500001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0020130001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0001350001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0064400001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0001230001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0065450001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0079000001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0006530001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0012550003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0026420001
Normal
-0.2
CPT0086030003
Tumor
-0.2
CPT0001340003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0088780001
Normal
-0.2
CPT0081600003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0089480003
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0012280003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0086950003
Tumor
-0.3
CPT0078800003
Tumor
-0.3
CPT0015730003
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0025110003
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0081880003
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0086820003
Tumor
-0.5
CPT0088970003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.