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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDSL is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
60.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
56.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
54.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
52.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
46.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
45.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
43.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
42.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
42.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
42.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
42.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
41.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
41.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
41.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
39.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
38.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
37.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
36.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
35.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
34.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
33.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
33.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
32.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
31.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
31.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
30.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
29.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
29.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
29.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
28.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
27.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
27.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
27.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
26.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
26.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
25.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
25.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
25.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
24.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
24.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
24.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
23.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
23.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
22.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
21.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
21.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
20.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
19.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
19.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
17.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
16.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
16.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
15.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
15.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
15.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
13.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
13.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
10.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDSL is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
87.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
65.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
62.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
61.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
54.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
52.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
46.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
45.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
38.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
37.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
36.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
35.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
34.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
33.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
33.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
33.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
31.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
31.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
30.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
30.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
30.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
29.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
29.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
28.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
27.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
27.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
27.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
27.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
27.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
26.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
26.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
26.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
26.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
25.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
25.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
25.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
25.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
25.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
25.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
25.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
25.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
24.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
24.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
24.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
24.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
24.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
24.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
24.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
24.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
24.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
24.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
24.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
23.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
23.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
23.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
23.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
23.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
23.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
23.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
22.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
22.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
22.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
22.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
22.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
22.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
21.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
21.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
21.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
21.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
21.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
21.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
21.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
21.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
21.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
21.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
21.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
20.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
20.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
20.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
20.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
20.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
20.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
20.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
20.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
20.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
20.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
20.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
20.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
20.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
19.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
19.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
19.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
19.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
19.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
19.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
19.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
19.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
19.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
19.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
19.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
19.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
19.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
19.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
19.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
19.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
19.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
19.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
19.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
19.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
18.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
18.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
18.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
18.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
18.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
18.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
18.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
18.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
18.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
18.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
18.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
18.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
18.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
18.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
18.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
18.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
17.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
17.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
17.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
17.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
17.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
17.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
17.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
17.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
17.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
17.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
17.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
17.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
17.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
17.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
17.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
17.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
17.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
17.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
16.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
16.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
16.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
16.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
16.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
16.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
16.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
16.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
16.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
16.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
16.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
16.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
16.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
16.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
16.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
16.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
16.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
16.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
16.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
16.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
16.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
16.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
15.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
15.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
15.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
15.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
15.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
15.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
15.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
15.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
15.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
15.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
15.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
15.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
15.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
15.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
15.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
14.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
14.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
14.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
14.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
14.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
14.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
14.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
14.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
14.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
14.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
14.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
14.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
14.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
14.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
14.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
14.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
14.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
14.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
13.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
13.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
13.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
13.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
13.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
13.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
13.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
13.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
13.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
13.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
13.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
13.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
13.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
13.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
13.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
13.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
13.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
13.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
13.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
13.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
13.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
13.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
13.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
13.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
13.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
13.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
13.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
13.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
13.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
13.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
13.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
13.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
13.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
12.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
12.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
12.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
12.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
12.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
12.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
12.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
12.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
12.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
12.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
12.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
12.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
12.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
12.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
12.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
11.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
11.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
11.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
11.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
11.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
11.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
11.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
11.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
11.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
11.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
11.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
11.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
11.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
11.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
11.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
11.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
11.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
10.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
10.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
10.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
10.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
10.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
10.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
10.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
10.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
10.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
10.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
10.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
10.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
10.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
10.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
10.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
10.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
10.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
9.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
9.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
9.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
9.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
9.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
9.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
9.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
9.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
9.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
9.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
9.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
9.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
9.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
9.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
9.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
9.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
9.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
8.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
8.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
8.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
8.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
8.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
8.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
8.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
8.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
8.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
8.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
8.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
8.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
8.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
8.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
8.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
8.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
7.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
7.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
7.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
7.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
7.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
7.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
7.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
7.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
7.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
7.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
7.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
7.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
7.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
6.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
6.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
6.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
6.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
6.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
6.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
6.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
6.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
5.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
5.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
5.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
5.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
4.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDSL is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
30.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
30.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
30.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
25.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
25.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
25.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
24.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
24.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
23.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
22.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
22.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
21.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
21.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
21.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
20.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
20.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
20.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
20.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
20.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
20.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
20.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
18.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
18.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
17.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
17.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
17.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
17.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
16.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
16.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
16.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
16.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
15.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
15.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
15.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
15.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
15.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
14.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
14.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
14.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
13.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
13.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
13.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
12.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
12.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
12.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
12.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
12.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
12.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
11.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
11.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
11.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
11.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
11.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
10.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
10.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
10.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
10.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
10.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
9.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
9.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
9.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
9.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
9.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
8.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
7.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
6.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
6.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
5.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
5.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
4.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDSL is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
55.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
173.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
151.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
149.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
142.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
140.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
139.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
121.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
120.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
114.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
112.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
106.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
105.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
99.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
99.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
95.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
95.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
94.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
93.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
92.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
92.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
91.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
91.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
90.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
88.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
88.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
86.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
86.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
86.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
86.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
86.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
86.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
85.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
85.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
85.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
84.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
84.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
84.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
84.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
84.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
82.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
79.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
79.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
79.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
78.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
78.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
78.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
77.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
76.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
75.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
75.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
74.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
74.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
74.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
73.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
73.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
72.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
71.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
71.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
71.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
71.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
70.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
70.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
70.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
69.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
66.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
66.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
66.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
66.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
66.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
66.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
66.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
66.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
66.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
66.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
65.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
65.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
65.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
65.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
65.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
65.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
65.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
64.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
64.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
64.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
63.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
63.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
63.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
63.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
62.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
62.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
62.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
62.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
62.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
61.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
61.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
61.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
61.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
61.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
61.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
60.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
60.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
60.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
60.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
59.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
59.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
59.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
59.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
59.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
59.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
58.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
58.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
58.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
58.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
58.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
58.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
58.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
58.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
57.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
57.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
57.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
57.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
57.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
57.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
56.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
56.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
56.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
56.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
56.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
56.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
56.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
55.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
55.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
55.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
55.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
55.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
55.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
55.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
54.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
53.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
53.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
53.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
53.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
52.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
52.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
52.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
52.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
51.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
51.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
51.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
50.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
50.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
50.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
50.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
50.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
50.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
50.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
50.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
49.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
49.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
49.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
49.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
48.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
48.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
48.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
48.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
48.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
48.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
48.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
47.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
47.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
47.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
47.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
47.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
46.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
46.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
46.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
46.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
45.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
45.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
45.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
44.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
43.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
43.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
43.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
43.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
43.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
43.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
42.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
42.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
42.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
42.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
42.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
42.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
41.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
41.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
41.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
41.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
41.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
41.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
40.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
40.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
40.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
40.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
39.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
39.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
39.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
39.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
39.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
39.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
38.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
38.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
38.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
38.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
37.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
36.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
36.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
36.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
36.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
36.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
36.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
35.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
35.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
35.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
35.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
34.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
34.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
34.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
34.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
33.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
33.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
32.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
32.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
32.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
32.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
31.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
31.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
31.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
31.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
31.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
30.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
30.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
30.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
29.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
29.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
29.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
28.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
28.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
27.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
26.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
26.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
26.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
25.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
24.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
24.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
24.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
23.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
23.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
23.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
21.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
21.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
21.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
20.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
20.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
20.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
20.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
19.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
19.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
17.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
16.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
14.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
11.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
10.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
9.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
5.4
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012570003
Normal
1.2
CPT0011410003
Tumor
1.2
CPT0026420001
Normal
1.0
CPT0065450001
Normal
1.0
CPT0009080003
Normal
0.9
CPT0092310003
Normal
0.9
CPT0012770003
Normal
0.9
CPT0086370003
Normal
0.9
CPT0077140001
Normal
0.8
CPT0078940001
Normal
0.8
CPT0081620001
Normal
0.8
CPT0006950001
Normal
0.7
CPT0064400001
Normal
0.7
CPT0079430001
Normal
0.7
CPT0087050003
Normal
0.7
CPT0069010001
Normal
0.7
CPT0023710001
Normal
0.7
CPT0007470001
Normal
0.7
CPT0020020001
Normal
0.6
CPT0088500001
Normal
0.6
CPT0088710001
Normal
0.6
CPT0088920001
Normal
0.6
CPT0002370001
Normal
0.6
CPT0086970003
Normal
0.6
CPT0020130001
Normal
0.6
CPT0092740003
Normal
0.6
CPT0000790001
Normal
0.6
CPT0007870001
Normal
0.6
CPT0063330001
Normal
0.6
CPT0066520001
Normal
0.6
CPT0001350001
Normal
0.6
CPT0012640003
Normal
0.6
CPT0078840001
Normal
0.6
CPT0089480003
Normal
0.6
CPT0088640003
Normal
0.6
CPT0000660001
Normal
0.5
CPT0025610001
Normal
0.5
CPT0079000001
Normal
0.5
CPT0025920001
Normal
0.5
CPT0006730001
Normal
0.5
CPT0078670001
Normal
0.5
CPT0024680001
Normal
0.5
CPT0009020003
Normal
0.5
CPT0014470001
Normal
0.5
CPT0092800003
Normal
0.5
CPT0001510001
Normal
0.5
CPT0086890003
Normal
0.5
CPT0065820001
Normal
0.4
CPT0088780001
Normal
0.4
CPT0088570001
Normal
0.4
CPT0010170001
Normal
0.4
CPT0000890001
Normal
0.4
CPT0001550001
Normal
0.4
CPT0017450001
Normal
0.4
CPT0013790003
Normal
0.4
CPT0012290003
Normal
0.4
CPT0012920003
Normal
0.4
CPT0023360001
Normal
0.4
CPT0014130001
Normal
0.4
CPT0077500001
Normal
0.4
CPT0079300001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0024670003
Tumor
0.3
CPT0014350001
Normal
0.3
CPT0010120001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0086830003
Normal
0.3
CPT0089040001
Normal
0.3
CPT0066430001
Normal
0.2
CPT0019160001
Normal
0.2
CPT0002270011
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0078530001
Normal
0.2
CPT0001190001
Normal
0.1
CPT0012550003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0069190001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0088550004
Tumor
0.0
CPT0001180009
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0086950003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0065430003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0077110003
Tumor
-0.4
CPT0086360003
Tumor
-0.4
CPT0069160003
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0023690003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0001500009
Tumor
-0.4
CPT0020120003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0001540009
Tumor
-0.4
CPT0066470004
Tumor
-0.5
CPT0075560003
Tumor
-0.5
CPT0079180003
Tumor
-0.5
CPT0088480003
Tumor
-0.5
CPT0092160003
Tumor
-0.5
CPT0021240003
Tumor
-0.5
CPT0078510003
Tumor
-0.5
CPT0015810003
Tumor
-0.5
CPT0079230003
Tumor
-0.5
CPT0077320001
Normal
-0.5
CPT0002350011
Tumor
-0.5
CPT0007320003
Tumor
-0.5
CPT0010110003
Tumor
-0.5
CPT0084590001
Normal
-0.5
CPT0066480003
Tumor
-0.5
CPT0071150004
Tumor
-0.5
CPT0079480003
Tumor
-0.5
CPT0078990003
Tumor
-0.5
CPT0088970003
Tumor
-0.5
CPT0092290003
Tumor
-0.6
CPT0079270003
Tumor
-0.6
CPT0007860003
Tumor
-0.6
CPT0086870003
Tumor
-0.6
CPT0075720003
Tumor
-0.6
CPT0017410003
Tumor
-0.6
CPT0065810003
Tumor
-0.6
CPT0000780007
Tumor
-0.6
CPT0012900004
Tumor
-0.6
CPT0026410003
Tumor
-0.6
CPT0092730003
Tumor
-0.6
CPT0088900003
Tumor
-0.6
CPT0077310003
Tumor
-0.6
CPT0014160003
Tumor
-0.6
CPT0078830003
Tumor
-0.6
CPT0010160003
Tumor
-0.7
CPT0000870016
Tumor
-0.7
CPT0025290003
Tumor
-0.7
CPT0088690003
Tumor
-0.7
CPT0025230003
Tumor
-0.7
CPT0081990003
Tumor
-0.7
CPT0025350003
Tumor
-0.7
CPT0001340003
Tumor
-0.7
CPT0025110003
Tumor
-0.7
CPT0012670003
Tumor
-0.7
CPT0000640003
Tumor
-0.7
CPT0089020003
Tumor
-0.8
CPT0065690003
Tumor
-0.8
CPT0019130003
Tumor
-0.8
CPT0078930003
Tumor
-0.8
CPT0006900003
Tumor
-0.8
CPT0088760003
Tumor
-0.8
CPT0069000003
Tumor
-0.8
CPT0023350003
Tumor
-0.8
CPT0001260009
Tumor
-0.8
CPT0009060003
Tumor
-0.8
CPT0089460004
Tumor
-0.9
CPT0009000003
Tumor
-0.9
CPT0011240003
Tumor
-0.9
CPT0065870003
Tumor
-0.9
CPT0075130003
Tumor
-0.9
CPT0065750003
Tumor
-0.9
CPT0088630003
Tumor
-1.0
CPT0025050003
Tumor
-1.0
CPT0012370003
Tumor
-1.0
CPT0014370004
Tumor
-1.0
CPT0012280003
Tumor
-1.0
CPT0077490003
Tumor
-1.0
CPT0063630003
Tumor
-1.0
CPT0012080003
Tumor
-1.0
CPT0085670003
Tumor
-1.1
CPT0006440003
Tumor
-1.1
CPT0025580004
Tumor
-1.1
CPT0001220008
Tumor
-1.1
CPT0092790003
Tumor
-1.1
CPT0025170003
Tumor
-1.1
CPT0086030003
Tumor
-1.1
CPT0012180003
Tumor
-1.1
CPT0076330003
Tumor
-1.2
CPT0084560003
Tumor
-1.2
CPT0017850003
Tumor
-1.3
CPT0081880003
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
