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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAPBPL is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
107.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
80.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
79.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
75.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
72.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
72.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
67.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
65.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
59.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
57.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
56.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
54.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
47.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
46.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
46.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
46.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
43.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
42.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
42.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
40.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
40.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
38.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
37.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
33.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
33.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
33.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
31.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
31.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
31.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
31.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
29.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
27.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
27.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
27.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
27.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
26.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
24.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
21.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
20.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
20.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
19.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
19.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
17.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
17.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
16.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
14.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
14.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
13.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
13.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
13.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
12.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
10.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
5.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
4.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAPBPL is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
104.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
90.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
74.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
71.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
70.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
66.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
66.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
65.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
64.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
62.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
62.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
61.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
61.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
61.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
59.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
58.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
58.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
57.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
56.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
56.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
55.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
55.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
55.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
55.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
54.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
54.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
54.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
53.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
51.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
51.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
50.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
49.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
48.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
47.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
47.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
45.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
45.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
45.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
45.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
45.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
44.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
44.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
44.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
44.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
42.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
42.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
42.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
41.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
41.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
41.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
41.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
41.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
41.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
41.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
41.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
41.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
41.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
40.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
40.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
40.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
40.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
40.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
40.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
40.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
40.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
40.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
40.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
39.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
39.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
39.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
39.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
39.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
39.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
39.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
39.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
39.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
39.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
39.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
38.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
38.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
38.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
38.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
38.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
38.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
38.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
38.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
37.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
37.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
37.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
37.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
37.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
37.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
37.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
37.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
36.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
36.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
36.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
36.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
36.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
36.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
36.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
36.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
36.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
35.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
35.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
35.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
35.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
35.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
35.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
35.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
35.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
35.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
35.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
34.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
34.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
34.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
34.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
34.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
34.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
34.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
34.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
34.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
34.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
34.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
34.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
33.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
33.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
33.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
33.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
33.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
33.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
33.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
33.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
33.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
33.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
33.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
33.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
32.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
32.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
32.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
32.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
32.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
32.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
32.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
32.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
32.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
31.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
31.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
31.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
31.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
31.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
31.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
31.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
31.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
31.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
31.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
31.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
31.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
31.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
30.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
30.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
30.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
30.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
30.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
30.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
30.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
30.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
30.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
30.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
29.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
29.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
29.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
29.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
29.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
29.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
29.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
29.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
29.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
29.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
29.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
29.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
29.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
28.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
28.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
28.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
28.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
28.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
28.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
28.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
28.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
27.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
27.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
27.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
27.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
27.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
27.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
27.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
27.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
27.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
27.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
27.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
26.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
26.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
26.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
26.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
26.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
26.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
26.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
26.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
26.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
26.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
26.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
26.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
26.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
26.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
26.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
26.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
26.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
26.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
26.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
25.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
25.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
25.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
25.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
25.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
25.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
25.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
25.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
24.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
24.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
24.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
24.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
24.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
24.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
24.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
24.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
24.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
24.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
24.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
23.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
23.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
23.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
23.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
23.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
23.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
23.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
23.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
23.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
23.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
23.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
23.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
23.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
23.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
23.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
23.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
23.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
23.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
22.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
22.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
22.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
22.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
22.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
22.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
22.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
22.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
21.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
21.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
21.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
21.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
21.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
21.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
21.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
21.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
21.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
21.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
21.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
21.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
21.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
21.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
21.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
21.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
21.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
21.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
20.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
20.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
20.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
20.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
20.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
20.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
20.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
20.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
20.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
20.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
20.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
20.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
20.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
19.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
19.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
19.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
19.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
19.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
19.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
19.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
19.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
18.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
18.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
18.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
18.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
18.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
18.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
18.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
18.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
18.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
18.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
18.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
18.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
18.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
18.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
18.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
18.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
17.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
17.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
17.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
17.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
17.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
17.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
17.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
17.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
17.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
17.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
17.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
17.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
17.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
17.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
16.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
16.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
16.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
16.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
16.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
16.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
16.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
16.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
16.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
16.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
15.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
15.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
15.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
15.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
15.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
15.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
15.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
15.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
15.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
15.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
15.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
14.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
14.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
14.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
14.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
14.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
14.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
14.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
14.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
13.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
13.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
13.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
13.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
13.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
13.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
12.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
12.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
12.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
12.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
12.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
12.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
12.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
12.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
11.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
11.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
11.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
11.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
11.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
11.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
11.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
10.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
10.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
9.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
9.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
9.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
9.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
6.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
5.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
5.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
5.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
4.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
3.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAPBPL is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
65.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
64.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
62.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
62.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
55.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
55.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
54.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
53.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
52.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
50.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
50.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
47.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
47.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
46.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
46.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
46.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
46.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
44.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
42.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
40.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
40.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
39.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
37.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
36.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
36.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
35.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
35.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
35.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
34.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
34.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
33.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
33.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
32.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
31.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
31.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
31.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
31.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
30.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
30.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
30.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
30.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
29.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
29.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
28.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
28.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
28.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
28.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
28.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
28.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
27.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
27.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
27.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
26.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
26.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
26.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
25.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
25.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
25.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
23.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
23.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
23.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
23.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
22.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
22.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
22.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
21.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
21.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
21.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
20.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
19.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
19.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
19.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
19.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
18.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
18.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
17.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
15.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
14.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
13.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
12.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
12.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
10.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
9.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
9.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
8.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
8.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
7.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAPBPL is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
171.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
96.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
75.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
75.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
71.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
65.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
65.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
63.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
61.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
59.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
58.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
55.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
55.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
55.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
54.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
54.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
53.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
53.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
52.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
51.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
50.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
50.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
48.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
48.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
47.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
45.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
44.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
44.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
44.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
43.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
43.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
43.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
43.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
43.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
42.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
42.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
42.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
42.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
42.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
41.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
41.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
41.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
41.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
41.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
41.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
40.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
40.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
40.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
40.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
40.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
40.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
39.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
39.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
39.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
38.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
37.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
36.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
36.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
36.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
36.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
36.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
35.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
35.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
35.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
35.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
34.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
34.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
34.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
34.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
33.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
33.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
32.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
32.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
31.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
31.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
31.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
31.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
31.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
31.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
31.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
30.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
30.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
30.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
30.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
29.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
29.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
29.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
29.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
29.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
28.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
28.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
28.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
28.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
28.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
27.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
27.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
27.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
27.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
27.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
26.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
26.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
26.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
26.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
26.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
26.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
26.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
26.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
25.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
25.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
25.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
25.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
25.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
25.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
25.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
25.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
24.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
24.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
24.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
24.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
24.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
24.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
24.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
24.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
24.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
23.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
23.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
23.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
23.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
23.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
22.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
22.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
22.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
22.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
21.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
21.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
21.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
21.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
21.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
21.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
21.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
21.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
21.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
20.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
20.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
20.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
20.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
20.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
20.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
19.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
19.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
19.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
19.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
19.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
19.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
18.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
18.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
18.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
18.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
18.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
17.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
17.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
17.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
17.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
17.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
16.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
16.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
16.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
16.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
16.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
16.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
16.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
15.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
15.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
15.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
15.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
15.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
15.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
15.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
15.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
14.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
14.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
14.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
14.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
13.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
13.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
13.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
12.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
12.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
12.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
12.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
12.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
12.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
11.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
11.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
11.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
11.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
10.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
10.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
10.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
9.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
8.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
8.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
8.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
7.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
7.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
1.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
1.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002350011
Tumor
2.1
CPT0015730003
Tumor
1.5
CPT0025290003
Tumor
1.3
CPT0081880003
Tumor
1.2
CPT0012180003
Tumor
1.2
CPT0078990003
Tumor
1.1
CPT0065690003
Tumor
1.1
CPT0065810003
Tumor
1.1
CPT0081990003
Tumor
1.1
CPT0078800003
Tumor
1.0
CPT0012280003
Tumor
1.0
CPT0025880003
Tumor
1.0
CPT0023350003
Tumor
1.0
CPT0015910003
Tumor
1.0
CPT0086820003
Tumor
1.0
CPT0007320003
Tumor
1.0
CPT0079380003
Tumor
0.9
CPT0087040003
Tumor
0.9
CPT0001500009
Tumor
0.9
CPT0088970003
Tumor
0.8
CPT0077310003
Tumor
0.8
CPT0025110003
Tumor
0.8
CPT0000870016
Tumor
0.8
CPT0075130003
Tumor
0.7
CPT0092730003
Tumor
0.7
CPT0019990003
Tumor
0.7
CPT0006630003
Tumor
0.7
CPT0025580004
Tumor
0.7
CPT0020120003
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0086360003
Tumor
0.6
CPT0079180003
Tumor
0.6
CPT0092790003
Tumor
0.5
CPT0009000003
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0023690003
Tumor
0.5
CPT0082010001
Normal
0.5
CPT0025050003
Tumor
0.5
CPT0092160003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0079270003
Tumor
0.4
CPT0012670003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0025350003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0077490003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0001510001
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0088550004
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0065450001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0066470004
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0078930003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0088630003
Tumor
-0.2
CPT0000790001
Normal
-0.2
CPT0000780007
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0088480003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0084560003
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0089480003
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0002270011
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0087050003
Normal
-0.3
CPT0089020003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0000660001
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0075170001
Normal
-0.4
CPT0001190001
Normal
-0.4
CPT0079410003
Tumor
-0.4
CPT0025170003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0012290003
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0086830003
Normal
-0.4
CPT0078830003
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0012550003
Tumor
-0.5
CPT0010160003
Tumor
-0.5
CPT0002370001
Normal
-0.5
CPT0088760003
Tumor
-0.5
CPT0025610001
Normal
-0.5
CPT0014470001
Normal
-0.5
CPT0011240003
Tumor
-0.5
CPT0019130003
Tumor
-0.5
CPT0088500001
Normal
-0.5
CPT0010120001
Normal
-0.6
CPT0086370003
Normal
-0.6
CPT0064400001
Normal
-0.6
CPT0078940001
Normal
-0.6
CPT0000890001
Normal
-0.6
CPT0079430001
Normal
-0.6
CPT0001230001
Normal
-0.6
CPT0006730001
Normal
-0.6
CPT0063330001
Normal
-0.6
CPT0088710001
Normal
-0.7
CPT0001350001
Normal
-0.7
CPT0081620001
Normal
-0.7
CPT0025920001
Normal
-0.7
CPT0085670003
Tumor
-0.7
CPT0079480003
Tumor
-0.7
CPT0077500001
Normal
-0.7
CPT0020020001
Normal
-0.7
CPT0077110003
Tumor
-0.7
CPT0079000001
Normal
-0.7
CPT0018250001
Normal
-0.7
CPT0063640001
Normal
-0.7
CPT0088640003
Normal
-0.7
CPT0009020003
Normal
-0.7
CPT0088780001
Normal
-0.8
CPT0010170001
Normal
-0.8
CPT0088570001
Normal
-0.8
CPT0023710001
Normal
-0.8
CPT0014130001
Normal
-0.8
CPT0012080003
Tumor
-0.8
CPT0078670001
Normal
-0.8
CPT0012370003
Tumor
-0.8
CPT0088920001
Normal
-0.9
CPT0006950001
Normal
-0.9
CPT0006530001
Normal
-0.9
CPT0025060001
Normal
-0.9
CPT0014370004
Tumor
-0.9
CPT0077140001
Normal
-0.9
CPT0092740003
Normal
-1.0
CPT0020130001
Normal
-1.0
CPT0001270001
Normal
-1.0
CPT0024680001
Normal
-1.1
CPT0012900004
Tumor
-1.1
CPT0078530001
Normal
-1.1
CPT0007870001
Normal
-1.1
CPT0014350001
Normal
-1.2
CPT0078840001
Normal
-1.2
CPT0012090003
Normal
-1.2
CPT0013790003
Normal
-1.2
CPT0026420001
Normal
-1.2
CPT0012640003
Normal
-1.2
CPT0075570001
Normal
-1.2
CPT0076350001
Normal
-1.3
CPT0012770003
Normal
-1.3
CPT0017410003
Tumor
-1.3
CPT0019160001
Normal
-1.3
CPT0066430001
Normal
-1.4
CPT0009080003
Normal
-1.4
CPT0017450001
Normal
-1.4
CPT0092310003
Normal
-1.5
CPT0012570003
Normal
-1.5
CPT0012920003
Normal
-1.8
CPT0089040001
Normal
-1.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
