HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:10.1 nTPM
HPA Brain:16.3 nTPM
GTEx:10.1 nTPM
FANTOM5:12.0 Scaled Tags Per Million
Pig:22.4 nTPM
Mouse:8.0 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035772
Glial cells Low
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 16.3
Sample id Sample description nTPM
Hippocampus
nTPM: 15.2
1855 Male, age 76, left hemisphere 16.2
1898 Male, age 80, left hemisphere 15.9
2621 Female, age 67, right hemisphere 15.5
2529 Female, age 94, left hemisphere 15.4
1911 Female, age 85, right hemisphere 14.7
2148 Female, age 91, left hemisphere 13.9
Dentate gyrus
nTPM: 15.0
2246 Female, age 85, both hemispheres 17.3
2010 Male, age 76, both hemispheres 17.1
1927 Female, age 91, both hemispheres 16.6
2528 Male, age 74, both hemispheres 14.0
2531 Female, age 67, both hemispheres 13.3
2530 Female, age 94, left hemisphere 11.9
Entorhinal gyrus
nTPM: 15.6
2117 Female, age 91, right hemisphere 17.2
1938 Female, age 85, left hemisphere 16.1
2764 Male, age 80, right hemisphere 15.3
1787 Male, age 76, left hemisphere 15.2
2686 Male, age 75, right hemisphere 15.0
2613 Female, age 94, left hemisphere 14.7
Hippocampus, CA1
nTPM: 15.7
2045 Male, age 76, both hemispheres 17.1
2527 Male, age 74, both hemispheres 16.4
2082 Female, age 91, right hemisphere 15.1
2749 Male, age 80, left hemisphere 15.0
1873 Female, age 85, both hemispheres 14.9
Hippocampus, CA2
nTPM: 15.1
1892 Male, age 76, both hemispheres 20.4
1940 Female, age 85, left hemisphere 15.1
2249 Male, age 74, both hemispheres 14.1
2113 Female, age 91, right hemisphere 13.8
2437 Female, age 94, left hemisphere 13.8
1963 Male, age 80, left hemisphere 13.5
Hippocampus, CA3
nTPM: 14.7
2436 Male, age 74, both hemispheres 16.1
1891 Female, age 85, both hemispheres 15.9
1867 Male, age 76, both hemispheres 15.3
2620 Female, age 94, left hemisphere 14.8
2137 Male, age 80, left hemisphere 13.9
2861 Female, age 67, both hemispheres 12.2
Parahippocampal cortex
nTPM: 16.3
1933 Female, age 85, both hemispheres 17.6
1850 Male, age 80, both hemispheres 17.4
2532 Female, age 72, left hemisphere 17.2
2018 Male, age 76, both hemispheres 16.8
2250 Female, age 67, right hemisphere 16.7
2693 Female, age 94, both hemispheres 16.4
2692 Male, age 74, both hemispheres 15.8
2622 Female, age 67, right hemisphere 15.5
2245 Female, age 91, both hemispheres 15.3
1990 Female, age 91, right hemisphere 13.9
Perirhinal gyrus
nTPM: 16.2
1841 Female, age 85, right hemisphere 16.9
2521 Female, age 94, right hemisphere 16.8
2848 Male, age 76, right hemisphere 16.4
1847 Female, age 91, left hemisphere 16.0
1794 Male, age 80, right hemisphere 14.8
Subiculum
nTPM: 16.1
2042 Male, age 76, both hemispheres 18.2
2438 Female, age 94, left hemisphere 17.8
1977 Female, age 85, both hemispheres 15.9
2729 Female, age 91, right hemisphere 15.6
2619 Male, age 74, both hemispheres 15.4
1901 Male, age 80, both hemispheres 14.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.1
Samples: 197

Max nTPM: 16.5
Min nTPM: 5.5
Std nTPM: 1.8
Median nTPM: 9.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 16.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 15.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 15.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 14.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 14.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 14.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 14.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 14.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 13.9
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 13.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 13.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 12.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.0
FF:10153-102I9 76 years, female 14.7
FF:10169-103B7 60 years, female 9.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.4
Pig sample Sample description nTPM
Subiculum
nTPM: 21.3
Samples: 4

Max nTPM: 22.5
Min nTPM: 18.4
Sample A Female 18.4
Sample B Female 22.4
Sample C Male 21.8
Sample D Male 22.5
Dorsal hippocampus
nTPM: 22.4
Samples: 4

Max nTPM: 26.1
Min nTPM: 20.0
Sample A Female 20.0
Sample B Female 21.4
Sample C Male 22.1
Sample D Male 26.1
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 26.6
Min nTPM: 20.7
Sample A Female 20.7
Sample B Female 21.2
Sample C Male 20.7
Sample D Male 26.6
Ventral hippocampus
nTPM: 21.5
Samples: 4

Max nTPM: 24.1
Min nTPM: 17.3
Sample A Female 24.0
Sample B Female 24.1
Sample C Male 17.3
Sample D Male 20.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 8.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.9
Sample A Male 7.6
Sample B Male 8.1
Sample C Female 6.9
Sample D Female 7.9
Hippocampal formation
nTPM: 8.0
Samples: 4

Max nTPM: 8.1
Min nTPM: 7.9
Sample A Male 8.0
Sample B Male 8.1
Sample C Female 8.1
Sample D Female 7.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68924805 Antisense, RP_050309_01_A09, Mouse strain C57BL/6J (56 days, male) 0.7

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