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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USO1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
68.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
284.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
210.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
197.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
164.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
154.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
151.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
148.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
140.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
140.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
134.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
133.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
128.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
128.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
125.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
125.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
123.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
116.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
110.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
109.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
109.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
96.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
73.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
66.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
64.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
64.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
52.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
51.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
51.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
49.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
49.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
43.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
39.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
39.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
39.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
37.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
36.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
35.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
33.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
32.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
32.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
29.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
26.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
25.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
24.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
23.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
23.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
22.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
22.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
21.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
21.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
20.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
19.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
18.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
18.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
17.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
16.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
16.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
16.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
15.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
15.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
12.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USO1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
118.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
117.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
84.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
78.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
78.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
78.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
74.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
73.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
73.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
73.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
72.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
71.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
71.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
68.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
68.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
67.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
67.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
66.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
65.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
64.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
64.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
63.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
62.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
61.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
61.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
60.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
59.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
59.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
59.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
59.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
59.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
58.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
58.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
58.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
58.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
58.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
57.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
57.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
57.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
57.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
57.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
56.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
56.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
56.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
56.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
55.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
55.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
55.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
54.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
54.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
54.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
54.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
53.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
53.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
53.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
53.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
53.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
53.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
52.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
52.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
52.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
52.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
52.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
52.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
51.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
51.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
51.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
51.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
51.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
51.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
51.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
51.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
51.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
51.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
51.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
51.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
50.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
50.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
50.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
50.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
50.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
50.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
50.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
50.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
50.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
50.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
50.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
50.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
50.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
49.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
49.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
49.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
49.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
49.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
49.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
49.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
49.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
49.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
48.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
48.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
48.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
48.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
48.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
48.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
48.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
48.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
48.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
48.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
48.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
48.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
48.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
48.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
47.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
47.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
47.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
47.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
47.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
47.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
47.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
47.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
47.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
47.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
46.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
46.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
46.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
46.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
46.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
46.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
46.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
46.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
46.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
46.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
46.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
45.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
45.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
45.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
45.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
45.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
45.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
45.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
45.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
45.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
45.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
45.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
45.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
45.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
45.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
45.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
45.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
44.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
44.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
44.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
44.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
44.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
44.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
44.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
44.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
43.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
43.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
43.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
43.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
43.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
43.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
43.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
43.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
43.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
43.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
43.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
43.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
43.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
43.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
43.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
43.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
43.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
43.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
43.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
42.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
42.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
42.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
42.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
42.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
42.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
42.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
42.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
42.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
42.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
42.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
42.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
42.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
42.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
42.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
42.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
42.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
42.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
42.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
42.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
42.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
42.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
41.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
41.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
41.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
41.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
41.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
41.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
41.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
41.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
41.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
41.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
41.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
41.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
40.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
40.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
40.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
40.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
40.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
40.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
40.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
40.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
40.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
39.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
39.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
39.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
39.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
39.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
39.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
39.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
39.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
39.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
39.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
39.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
38.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
38.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
38.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
38.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
38.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
38.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
38.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
38.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
38.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
38.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
38.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
38.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
37.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
37.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
37.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
37.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
37.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
37.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
37.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
37.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
37.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
37.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
37.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
36.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
36.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
36.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
36.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
36.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
36.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
36.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
36.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
36.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
36.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
36.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
36.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
36.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
36.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
36.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
36.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
36.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
35.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
35.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
35.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
35.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
35.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
35.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
35.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
35.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
35.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
35.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
34.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
34.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
34.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
34.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
34.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
34.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
34.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
34.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
33.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
33.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
33.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
33.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
33.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
33.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
33.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
33.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
33.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
32.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
32.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
32.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
32.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
32.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
32.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
32.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
32.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
32.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
32.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
32.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
31.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
31.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
31.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
31.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
31.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
31.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
31.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
31.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
31.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
31.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
31.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
31.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
30.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
30.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
30.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
30.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
30.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
30.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
30.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
29.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
29.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
29.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
29.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
29.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
29.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
29.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
29.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
29.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
29.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
28.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
28.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
28.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
28.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
28.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
28.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
28.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
28.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
28.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
28.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
28.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
28.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
28.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
27.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
27.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
27.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
27.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
27.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
27.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
27.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
26.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
26.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
26.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
26.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
26.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
25.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
25.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
25.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
25.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
25.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
25.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
25.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
25.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
25.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
25.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
25.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
24.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
24.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
24.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
24.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
24.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
24.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
24.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
24.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
24.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
23.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
23.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
23.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
23.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
23.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
23.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
23.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
23.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
23.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
23.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
22.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
22.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
22.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
22.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
22.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
22.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
22.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
22.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
22.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
22.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
22.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
22.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
21.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
21.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
21.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
21.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
21.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
21.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
21.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
21.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
21.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
21.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
21.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
21.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
21.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
21.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
20.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
20.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
20.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
20.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
20.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
20.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
20.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
20.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
19.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
19.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
19.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
19.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
19.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
19.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
18.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
18.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
18.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
18.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
18.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
18.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
17.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
17.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
17.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
17.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
17.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
17.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
16.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
16.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
16.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
16.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
16.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
16.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
16.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
16.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
16.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
15.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
15.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
15.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
14.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
14.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
14.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
13.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
13.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
11.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
10.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
7.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
6.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USO1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
77.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
76.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
75.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
74.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
74.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
70.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
69.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
64.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
62.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
62.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
61.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
60.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
60.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
59.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
59.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
58.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
58.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
57.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
55.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
55.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
54.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
54.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
53.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
53.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
53.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
53.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
52.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
52.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
52.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
52.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
51.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
51.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
51.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
50.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
50.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
50.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
50.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
49.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
49.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
49.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
48.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
48.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
48.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
47.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
47.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
46.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
46.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
46.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
46.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
46.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
45.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
45.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
44.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
44.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
43.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
43.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
43.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
43.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
43.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
43.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
43.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
42.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
41.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
41.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
41.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
40.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
40.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
39.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
39.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
39.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
38.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
38.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
37.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
36.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
36.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
35.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
33.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
33.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
33.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
33.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
32.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
31.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
30.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
30.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
30.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
29.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
27.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
22.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
21.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
21.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
19.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
18.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
15.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USO1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
278.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
247.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
243.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
222.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
198.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
198.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
178.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
166.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
143.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
143.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
128.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
120.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
119.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
119.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
112.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
112.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
111.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
111.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
111.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
105.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
105.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
104.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
101.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
101.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
101.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
100.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
96.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
92.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
91.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
91.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
90.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
90.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
89.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
89.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
89.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
87.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
87.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
85.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
85.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
84.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
84.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
82.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
81.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
80.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
80.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
73.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
72.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
70.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
67.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
65.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
65.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
65.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
64.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
63.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
61.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
59.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
58.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
58.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
57.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
56.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
56.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
55.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
53.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
52.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
51.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
51.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
51.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
49.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
49.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
48.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
47.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
47.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
47.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
44.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
44.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
44.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
43.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
42.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
41.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
41.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
41.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
40.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
39.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
38.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
38.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
38.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
38.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
37.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
37.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
37.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
36.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
34.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
33.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
33.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
33.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
32.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
32.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
32.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
32.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
31.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
31.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
31.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
31.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
31.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
30.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
30.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
29.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
29.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
29.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
29.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
29.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
29.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
29.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
28.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
28.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
28.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
27.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
27.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
27.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
27.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
27.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
27.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
27.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
26.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
26.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
26.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
26.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
25.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
25.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
24.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
24.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
24.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
24.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
24.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
24.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
23.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
23.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
22.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
22.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
22.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
22.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
22.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
21.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
21.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
21.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
21.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
20.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
20.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
20.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
20.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
20.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
20.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
19.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
19.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
19.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
19.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
19.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
18.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
18.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
18.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
18.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
18.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
18.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
18.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
18.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
18.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
18.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
18.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
17.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
17.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
17.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
17.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
17.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
17.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
17.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
17.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
17.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
16.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
16.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
16.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
16.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
16.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
16.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
15.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
15.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
15.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
14.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
14.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
14.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
13.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
13.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
13.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
12.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
12.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
12.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
11.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
11.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
11.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
10.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
9.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
9.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
9.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
8.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
8.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
8.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
7.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
6.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
0.9
CPT0078660003
Tumor
0.8
CPT0015730003
Tumor
0.8
CPT0081880003
Tumor
0.7
CPT0012180003
Tumor
0.7
CPT0012280003
Tumor
0.7
CPT0088550004
Tumor
0.7
CPT0023350003
Tumor
0.6
CPT0007320003
Tumor
0.6
CPT0002270011
Tumor
0.6
CPT0086820003
Tumor
0.6
CPT0078830003
Tumor
0.6
CPT0078800003
Tumor
0.5
CPT0084560003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0009060003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0065810003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0069000003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0063630003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0012570003
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0086950003
Tumor
0.0
CPT0001340003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0076350001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0012770003
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0001190001
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0065820001
Normal
0.0
CPT0017410003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0000660001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0077500001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0077320001
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0006630003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0020020001
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0088760003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0065930003
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0077490003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
