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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SENP7 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
74.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
33.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
26.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
22.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
16.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
15.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
11.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
10.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
10.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
8.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
7.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
7.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
7.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
6.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
6.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
5.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
5.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
5.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
4.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
4.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
4.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
4.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
4.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
4.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
4.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
4.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
4.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
4.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
3.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
3.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
3.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
3.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
3.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
3.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
3.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
3.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
2.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
2.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
1.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
1.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SENP7 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
52.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
41.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
34.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
34.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
31.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
31.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
29.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
29.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
28.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
28.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
27.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
27.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
26.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
26.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
25.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
25.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
25.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
25.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
25.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
24.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
24.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
24.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
23.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
23.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
23.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
23.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
22.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
22.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
22.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
22.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
22.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
21.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
21.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
21.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
21.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
21.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
20.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
20.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
20.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
19.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
19.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
19.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
19.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
19.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
19.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
19.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
19.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
19.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
19.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
19.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
18.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
18.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
18.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
18.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
18.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
18.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
18.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
18.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
18.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
17.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
17.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
17.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
17.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
17.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
17.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
16.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
16.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
16.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
16.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
16.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
16.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
15.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
15.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
15.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
15.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
15.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
15.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
15.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
15.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
15.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
15.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
14.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
14.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
14.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
14.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
14.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
14.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
14.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
14.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
14.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
14.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
14.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
14.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
14.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
13.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
13.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
13.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
13.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
13.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
13.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
13.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
13.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
13.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
13.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
13.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
13.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
12.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
12.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
12.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
12.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
12.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
12.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
12.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
12.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
12.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
12.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
12.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
12.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
12.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
12.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
12.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
12.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
12.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
12.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
12.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
12.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
11.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
11.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
11.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
11.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
11.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
11.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
11.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
11.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
11.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
11.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
11.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
11.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
11.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
11.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
11.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
11.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
11.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
10.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
10.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
10.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
10.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
10.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
10.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
10.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
10.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
10.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
10.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
10.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
10.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
10.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
10.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
10.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
9.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
9.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
9.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
9.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
9.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
9.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
9.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
9.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
9.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
8.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
8.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
8.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
8.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
8.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
8.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
8.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
8.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
8.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
8.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
8.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
8.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
8.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
8.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
8.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
8.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
8.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
8.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
8.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
8.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
8.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
8.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
8.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
8.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
8.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
7.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
7.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
7.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
7.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
7.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
7.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
7.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
7.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
7.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
7.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
7.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
7.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
7.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
7.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
7.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
7.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
7.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
7.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
7.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
7.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
7.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
7.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
7.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
7.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
7.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
7.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
7.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
7.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
6.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
6.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
6.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
6.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
6.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
6.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
6.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
6.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
6.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
6.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
6.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
6.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
6.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
6.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
6.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
6.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
6.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
6.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
6.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
6.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
6.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
6.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
6.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
6.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
6.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
6.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
6.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
6.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
6.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
6.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
6.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
6.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
6.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
6.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
6.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
6.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
5.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
5.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
5.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
5.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
5.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
5.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
5.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
5.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
5.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
5.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
5.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
5.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
5.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
5.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
5.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
5.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
5.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
5.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
5.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
5.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
5.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
5.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
5.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
5.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
5.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
4.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
4.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
4.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
4.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
4.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
4.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
4.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
4.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
4.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
4.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
4.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
4.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
4.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
4.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
4.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
4.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
4.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
4.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
4.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
4.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
4.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
4.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
3.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
3.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
3.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
3.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
3.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
3.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
3.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
3.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
3.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
3.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
3.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
3.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
3.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
3.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
3.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
3.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
3.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
3.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
3.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
2.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
2.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
2.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
2.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
2.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
2.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SENP7 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
24.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
24.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
24.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
22.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
21.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
21.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
20.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
19.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
19.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
19.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
18.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
16.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
16.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
16.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
16.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
16.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
15.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
15.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
15.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
14.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
14.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
14.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
14.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
14.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
14.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
13.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
13.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
13.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
13.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
12.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
12.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
11.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
11.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
11.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
11.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
11.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
11.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
10.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
9.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
9.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
9.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
9.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
9.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
9.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
9.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
9.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
9.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
8.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
8.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
8.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
8.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
8.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
7.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
7.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
7.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
7.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
7.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
7.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
6.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
6.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
6.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
6.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
5.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
5.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
5.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
4.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
4.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
4.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
4.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
4.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
3.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
3.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SENP7 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
153.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
70.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
59.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
52.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
37.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
34.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
32.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
32.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
27.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
27.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
25.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
25.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
24.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
24.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
23.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
22.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
21.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
20.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
20.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
20.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
17.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
17.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
16.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
16.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
15.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
15.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
14.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
14.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
14.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
14.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
13.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
13.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
13.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
13.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
13.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
13.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
13.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
12.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
12.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
12.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
12.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
12.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
12.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
12.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
11.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
11.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
11.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
11.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
11.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
11.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
11.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
11.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
11.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
11.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
11.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
11.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
11.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
10.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
10.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
10.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
10.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
10.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
10.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
10.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
10.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
10.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
9.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
9.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
9.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
9.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
9.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
9.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
9.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
9.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
9.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
8.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
8.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
8.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
8.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
8.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
8.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
8.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
8.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
8.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
8.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
8.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
8.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
7.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
7.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
7.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
7.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
7.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
7.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
7.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
7.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
7.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
7.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
7.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
7.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
7.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
7.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
7.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
7.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
7.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
7.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
7.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
7.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
6.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
6.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
6.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
6.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
6.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
6.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
6.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
6.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
6.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
5.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
5.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
5.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
5.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
5.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
5.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
5.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
5.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
5.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
5.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
5.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
5.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
5.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
5.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
5.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
5.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
5.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
5.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
5.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
5.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
5.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
5.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
5.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
5.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
5.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
4.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
4.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
4.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
4.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
4.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
4.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
4.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
4.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
4.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
4.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
4.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
4.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
4.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
4.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
4.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
4.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
4.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
4.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
4.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
4.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
4.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
3.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
3.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
3.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
3.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
3.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
3.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
3.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
3.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
3.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
3.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
3.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
3.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
3.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
3.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
3.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
3.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
3.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
3.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
3.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
3.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
3.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
3.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
3.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
3.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
3.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
2.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
2.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
2.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
2.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
2.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
2.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
2.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
2.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
2.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
2.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
2.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
2.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
2.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
2.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
2.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
1.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
1.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
1.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
1.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
1.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
1.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
1.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
1.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
1.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
4.5
CPT0069000003
Tumor
1.7
CPT0065870003
Tumor
1.0
CPT0025580004
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0086870003
Tumor
0.5
CPT0006440003
Tumor
0.5
CPT0006900003
Tumor
0.5
CPT0071150004
Tumor
0.4
CPT0088970003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0017850003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0081990003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0078530001
Normal
0.3
CPT0092190003
Normal
0.3
CPT0001230001
Normal
0.2
CPT0077110003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0079410003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0007320003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0026410003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0088500001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0075170001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0078800003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0015810003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0064370003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0078660003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0069010001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0079300001
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0012280003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0079180003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0065690003
Tumor
-0.2
CPT0087050003
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0066470004
Tumor
-0.2
CPT0026420001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0012550003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0075570001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0075130003
Tumor
-0.3
CPT0092740003
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0077310003
Tumor
-0.3
CPT0086950003
Tumor
-0.4
CPT0014470001
Normal
-0.4
CPT0025170003
Tumor
-0.4
CPT0088780001
Normal
-0.4
CPT0001340003
Tumor
-0.4
CPT0076330003
Tumor
-0.4
CPT0014450004
Tumor
-0.5
CPT0088570001
Normal
-0.5
CPT0084590001
Normal
-0.6
CPT0088920001
Normal
-0.7
CPT0086820003
Tumor
-0.7
CPT0007470001
Normal
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
