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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
120.0
nTPM
GTEx:
120.0
nTPM
FANTOM5:
194.5
Scaled Tags Per Million
Pig:
73.4
nTPM
Mouse:
253.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
120.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 120.0
Samples: 105
Max nTPM: 237.3
Min nTPM: 65.6
Std nTPM: 33.5
Median nTPM:
139_1
64 years, female
237.3
413_1
59 years, female
231.8
501_1
88 years, male
224.7
316_1
62 years, male
196.3
149_1
88 years, male
187.1
43_1
64 years, female
187.0
491_1
89 years, female
183.9
322_1
76 years, male
181.7
81_1
67 years, male
181.2
142_1
61 years, female
158.8
466_1
57 years, female
155.7
348_1
84 years, male
153.8
145_1
84 years, male
152.7
396_1
62 years, male
150.2
162_1
79 years, female
149.3
518_1
75 years, female
149.3
89_1
63 years, male
148.8
17_1
71 years, male
147.7
288_1
66 years, female
147.7
18_1
88 years, male
146.5
217_1
76 years, male
145.6
415_1
77 years, female
144.6
32_1
67 years, male
141.7
126_1
63 years, male
138.8
229_1
69 years, female
138.4
6_1
73 years, female
135.9
404_1
82 years, female
135.4
109_1
81 years, female
134.5
324_1
76 years, male
131.7
405_1
91 years, male
131.6
2_1
77 years, female
131.1
153_1
70 years, female
130.9
495_1
57 years, female
129.5
314_1
67 years, male
128.9
321_1
62 years, female
128.7
315_1
62 years, female
123.9
286_1
68 years, female
123.8
414_1
84 years, female
123.4
320_1
89 years, female
123.3
4_1
88 years, female
123.2
120_1
70 years, female
122.7
311_1
78 years, male
122.4
468_1
89 years, male
122.2
137_1
83 years, male
121.2
490_1
67 years, female
120.1
517_1
88 years, male
118.2
265_1
87 years, male
117.7
35_1
74 years, female
117.0
291_1
76 years, male
116.6
117_1
61 years, male
116.5
318_1
68 years, male
115.0
406_1
79 years, male
114.7
295_1
61 years, female
114.0
266_1
85 years, male
112.2
447_1
81 years, male
111.2
115_1
83 years, male
110.8
119_1
70 years, female
110.8
506_1
65 years, male
109.4
335_1
73 years, female
108.7
41_1
94 years, female
108.0
264_1
73 years, female
108.0
452_1
88 years, female
107.5
251_1
78 years, male
106.5
307_1
66 years, female
106.4
308_1
70 years, female
106.3
254_1
77 years, female
105.9
499_1
55 years, female
105.8
173_1
67 years, male
104.9
386_1
76 years, male
104.8
246_1
77 years, male
103.7
503_1
68 years, male
102.3
353_1
82 years, female
101.7
379_1
60 years, male
101.5
313_1
79 years, female
101.4
292_1
71 years, male
100.9
376_1
75 years, female
100.9
172_1
72 years, female
100.7
375_1
74 years, female
99.2
389_1
86 years, female
98.4
349_1
83 years, male
97.1
526_1
61 years, male
96.5
480_1
63 years, male
95.3
9_1
66 years, female
94.5
377_1
82 years, female
93.9
237_1
82 years, male
93.7
317_1
60 years, male
92.6
189_1
76 years, male
92.2
42_1
85 years, male
91.9
352_1
62 years, male
90.3
425_1
59 years, female
90.3
347_1
72 years, male
85.2
354_1
81 years, female
85.1
384_1
83 years, male
84.0
319_1
81 years, male
83.4
350_1
84 years, female
82.7
293_1
68 years, female
82.5
243_1
75 years, male
82.2
177_1
74 years, male
82.0
163_1
78 years, male
79.5
351_1
91 years, male
78.8
99_1
64 years, male
73.5
355_1
70 years, female
73.4
394_1
75 years, female
72.3
218_1
71 years, female
71.7
356_1
87 years, female
65.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
