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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
62.9
nTPM
HPA Brain:
169.6
nTPM
GTEx:
62.9
nTPM
FANTOM5:
481.0
Scaled Tags Per Million
Pig:
99.9
nTPM
Mouse:
235.3
nTPM
Allen mouse:
28.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
169.6
Sample id
Sample description
nTPM
Amygdala nTPM: 154.6
2814
Male, age 76, right hemisphere
202.2
1987
Female, age 91, left hemisphere
167.3
2514
Male, age 75, right hemisphere
161.4
2517
Female, age 94, left hemisphere
137.8
2695
Female, age 67, right hemisphere
104.1
Basal amygdala nTPM: 149.1
2110
Male, age 80, left hemisphere
184.0
2243
Female, age 91, right hemisphere
180.4
1955
Male, age 76, both hemispheres
173.3
2685
Female, age 94, left hemisphere
140.3
2609
Male, age 75, right hemisphere
132.8
2827
Female, age 67, right hemisphere
83.7
Central amygdala nTPM: 148.8
1905
Male, age 76, both hemispheres
183.3
2239
Male, age 80, left hemisphere
175.6
2701
Female, age 91, right hemisphere
156.5
2515
Male, age 75, right hemisphere
124.0
2826
Female, age 94, left hemisphere
104.5
Corticomedial amygdala nTPM: 169.6
2240
Male, age 76, both hemispheres
193.3
2429
Female, age 94, left hemisphere
191.2
2829
Male, age 80, left hemisphere
187.9
2242
Female, age 91, right hemisphere
182.2
2535
Female, age 67, right hemisphere
135.1
2428
Male, age 75, right hemisphere
128.2
Lateral amygdala nTPM: 130.5
1883
Male, age 76, both hemispheres
180.6
2534
Female, age 94, left hemisphere
136.7
2255
Female, age 91, right hemisphere
135.3
2516
Male, age 75, right hemisphere
131.5
2256
Male, age 80, left hemisphere
114.8
2830
Female, age 67, right hemisphere
83.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
62.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 62.9
Samples: 152
Max nTPM: 142.3
Min nTPM: 11.8
Std nTPM: 26.5
Median nTPM: 63.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
142.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
135.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
133.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
128.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
123.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
120.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
118.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
111.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
109.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
108.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
107.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
106.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
100.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
98.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
97.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
96.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
95.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
94.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
92.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
91.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
91.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
88.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
87.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
87.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
86.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
86.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
84.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
83.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
83.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
82.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
81.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
81.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
81.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
81.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
81.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
81.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
80.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
80.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
79.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
79.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
79.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
79.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
78.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
77.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
77.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
76.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
76.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
75.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
75.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
74.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
73.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
72.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
72.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
72.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
70.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
70.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
69.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
69.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
68.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
68.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
68.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
67.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
66.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
66.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
65.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
65.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
65.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
65.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
65.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
64.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
64.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
64.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
64.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
63.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
63.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
63.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
62.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
61.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
61.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
60.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
58.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
58.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
57.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
57.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
57.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
56.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
56.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
56.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
56.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
54.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
53.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
53.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
52.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
51.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
50.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
50.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
50.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
49.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
49.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
48.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
48.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
47.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
46.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
46.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
46.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
46.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
46.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
45.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
45.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
45.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
44.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
42.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
42.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
42.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
41.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
41.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
41.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
40.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
40.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
39.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
36.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
36.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
36.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
36.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
35.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
35.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
35.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
35.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
34.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
34.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
33.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
32.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
32.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
31.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
30.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
30.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
30.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
29.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
28.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
28.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
27.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
27.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
27.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
27.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
26.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
25.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
23.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
23.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
21.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
21.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
15.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
11.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
235.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 235.3
Samples: 4
Max nTPM: 282.7
Min nTPM: 213.3
Sample A
Male
282.7
Sample B
Male
216.4
Sample C
Female
213.3
Sample D
Female
228.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.