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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB1A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
70.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
152.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
145.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
139.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
131.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
123.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
123.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
120.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
119.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
118.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
97.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
94.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
93.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
91.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
90.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
88.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
87.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
87.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
85.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
84.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
82.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
81.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
79.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
78.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
76.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
75.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
75.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
72.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
69.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
69.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
66.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
65.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
64.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
62.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
62.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
62.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
61.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
61.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
59.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
58.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
55.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
53.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
53.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
53.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
52.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
48.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
48.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
47.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
45.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
45.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
45.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
43.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
43.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
42.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
42.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
42.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
41.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
39.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
38.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
36.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
33.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
33.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
33.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
23.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB1A is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
128.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
429.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
322.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
299.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
286.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
264.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
260.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
253.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
246.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
233.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
232.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
231.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
230.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
225.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
224.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
219.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
217.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
214.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
213.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
209.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
203.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
202.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
201.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
200.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
197.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
195.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
194.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
194.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
193.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
192.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
191.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
190.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
188.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
185.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
184.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
184.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
184.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
180.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
180.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
178.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
178.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
177.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
176.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
175.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
174.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
173.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
172.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
172.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
171.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
170.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
170.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
170.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
169.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
168.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
168.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
166.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
165.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
165.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
165.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
165.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
165.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
164.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
163.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
163.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
163.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
162.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
162.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
162.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
162.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
162.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
161.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
161.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
161.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
160.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
160.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
160.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
159.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
159.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
159.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
159.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
159.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
158.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
158.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
158.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
158.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
157.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
157.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
157.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
156.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
155.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
155.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
155.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
155.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
155.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
155.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
155.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
154.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
154.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
154.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
154.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
154.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
154.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
154.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
154.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
154.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
153.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
153.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
153.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
153.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
152.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
152.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
152.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
152.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
151.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
151.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
151.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
150.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
150.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
150.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
150.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
150.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
150.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
149.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
149.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
149.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
149.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
148.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
148.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
148.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
148.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
148.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
148.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
147.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
147.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
147.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
147.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
147.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
147.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
147.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
147.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
146.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
146.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
146.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
146.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
146.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
145.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
145.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
145.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
145.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
145.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
145.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
144.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
144.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
144.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
144.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
144.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
144.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
143.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
143.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
143.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
143.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
143.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
143.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
143.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
143.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
143.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
142.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
142.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
142.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
142.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
142.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
141.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
141.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
141.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
141.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
141.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
141.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
140.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
140.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
140.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
140.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
140.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
140.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
140.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
140.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
140.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
140.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
140.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
140.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
139.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
139.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
139.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
139.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
139.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
139.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
139.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
138.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
138.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
138.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
138.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
138.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
138.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
138.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
137.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
137.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
137.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
137.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
137.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
137.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
137.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
137.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
137.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
136.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
136.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
136.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
136.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
136.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
136.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
135.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
135.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
135.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
134.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
134.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
134.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
134.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
134.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
134.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
134.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
134.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
133.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
133.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
133.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
133.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
133.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
133.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
132.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
132.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
132.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
132.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
132.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
131.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
131.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
131.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
131.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
131.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
131.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
130.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
130.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
130.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
129.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
129.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
129.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
129.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
129.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
129.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
129.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
129.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
129.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
129.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
128.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
128.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
128.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
128.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
128.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
128.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
128.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
128.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
128.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
128.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
128.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
128.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
128.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
128.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
127.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
127.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
126.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
126.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
126.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
126.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
126.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
125.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
125.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
125.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
125.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
125.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
124.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
124.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
124.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
124.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
123.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
123.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
123.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
123.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
123.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
122.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
122.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
122.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
122.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
122.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
122.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
122.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
122.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
121.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
121.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
121.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
121.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
121.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
120.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
120.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
120.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
120.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
120.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
120.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
120.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
119.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
119.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
119.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
119.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
119.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
119.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
118.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
118.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
117.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
117.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
117.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
116.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
116.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
116.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
116.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
116.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
116.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
115.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
115.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
115.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
115.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
115.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
115.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
115.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
115.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
115.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
114.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
114.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
114.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
114.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
114.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
113.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
113.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
113.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
113.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
113.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
113.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
112.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
112.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
112.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
112.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
112.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
112.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
112.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
111.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
111.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
111.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
111.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
111.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
111.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
111.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
111.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
110.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
110.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
110.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
110.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
109.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
109.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
109.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
109.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
108.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
108.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
108.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
107.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
107.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
106.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
106.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
106.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
106.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
106.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
106.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
105.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
105.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
105.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
105.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
105.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
105.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
105.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
104.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
103.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
103.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
102.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
102.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
102.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
102.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
102.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
102.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
101.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
101.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
101.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
101.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
101.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
100.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
100.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
100.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
100.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
100.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
100.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
100.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
99.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
98.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
98.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
98.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
98.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
98.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
98.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
97.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
97.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
97.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
97.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
96.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
96.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
96.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
96.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
95.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
95.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
94.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
94.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
94.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
94.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
94.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
93.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
93.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
93.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
93.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
93.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
92.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
92.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
92.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
92.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
91.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
91.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
91.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
91.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
90.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
90.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
90.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
90.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
89.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
89.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
89.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
89.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
88.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
88.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
87.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
86.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
86.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
86.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
85.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
85.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
85.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
83.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
82.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
82.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
81.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
81.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
79.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
79.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
78.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
76.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
75.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
74.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
74.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
73.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
73.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
72.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
71.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
71.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
70.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
67.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
67.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
66.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
66.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
66.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
66.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
65.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
65.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
64.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
64.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
63.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
62.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
61.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
61.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
60.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
59.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
58.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
58.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
58.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
56.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
55.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
55.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
54.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
54.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
53.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
53.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
52.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
50.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
48.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
45.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
45.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
41.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
40.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
39.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
34.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
30.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
29.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
27.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB1A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
163.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
398.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
332.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
310.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
272.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
269.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
245.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
243.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
228.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
223.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
216.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
215.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
212.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
206.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
202.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
201.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
199.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
194.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
194.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
193.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
192.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
187.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
186.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
181.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
180.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
180.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
174.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
173.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
172.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
171.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
171.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
170.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
169.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
168.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
168.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
167.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
166.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
166.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
165.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
164.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
164.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
163.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
162.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
162.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
162.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
161.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
160.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
158.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
158.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
156.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
156.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
156.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
154.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
154.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
152.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
151.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
151.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
149.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
149.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
147.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
146.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
146.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
144.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
143.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
143.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
140.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
140.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
139.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
136.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
135.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
135.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
135.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
134.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
134.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
133.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
130.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
130.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
129.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
129.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
128.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
127.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
127.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
126.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
124.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
123.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
121.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
120.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
119.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
118.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
116.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
116.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
114.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
112.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
111.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
111.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
109.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
103.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
101.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
99.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
96.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB1A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
129.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
305.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
273.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
262.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
254.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
254.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
252.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
245.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
244.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
242.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
239.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
232.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
231.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
228.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
226.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
226.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
216.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
216.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
211.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
208.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
202.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
200.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
200.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
197.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
195.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
195.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
194.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
193.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
193.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
190.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
190.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
188.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
188.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
188.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
188.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
184.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
184.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
184.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
184.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
183.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
182.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
181.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
181.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
179.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
178.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
177.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
176.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
175.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
175.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
175.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
175.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
175.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
174.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
174.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
174.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
174.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
174.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
172.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
172.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
171.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
171.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
170.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
170.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
169.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
168.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
167.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
167.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
164.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
163.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
162.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
161.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
160.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
160.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
159.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
158.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
158.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
158.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
157.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
157.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
156.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
155.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
154.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
153.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
153.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
153.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
153.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
153.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
151.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
151.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
150.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
150.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
148.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
146.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
146.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
146.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
146.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
146.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
146.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
145.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
145.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
145.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
145.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
144.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
143.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
142.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
142.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
141.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
141.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
141.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
141.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
141.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
141.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
141.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
141.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
140.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
139.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
138.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
137.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
137.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
137.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
136.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
136.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
136.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
136.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
135.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
135.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
134.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
134.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
133.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
133.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
132.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
131.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
130.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
130.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
129.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
129.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
128.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
128.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
127.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
127.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
127.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
127.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
126.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
126.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
125.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
124.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
124.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
123.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
122.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
122.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
121.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
119.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
119.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
118.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
117.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
117.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
116.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
116.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
116.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
116.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
116.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
115.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
115.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
115.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
115.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
114.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
114.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
114.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
113.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
113.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
112.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
112.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
111.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
111.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
111.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
110.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
110.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
110.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
110.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
109.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
108.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
108.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
108.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
106.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
106.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
105.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
105.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
105.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
103.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
103.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
102.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
102.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
101.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
101.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
100.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
100.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
100.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
99.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
99.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
98.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
97.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
96.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
95.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
95.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
94.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
94.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
94.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
94.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
94.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
94.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
93.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
92.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
92.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
92.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
91.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
91.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
90.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
90.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
90.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
90.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
89.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
89.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
89.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
88.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
87.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
86.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
86.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
86.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
85.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
84.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
84.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
83.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
81.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
81.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
81.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
79.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
79.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
79.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
79.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
79.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
78.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
78.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
77.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
76.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
76.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
75.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
75.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
73.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
73.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
73.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
73.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
71.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
69.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
68.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
68.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
67.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
67.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
65.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
65.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
63.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
63.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
62.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
62.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
61.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
56.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
54.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
54.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
53.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
53.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
53.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
51.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
49.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
48.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
47.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
46.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
45.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
44.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
42.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
41.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
41.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
39.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
37.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
28.4
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0078830003
Tumor
0.6
CPT0001180009
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0078660003
Tumor
0.4
CPT0000640003
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0014450004
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0001500009
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0092800003
Normal
0.2
CPT0089480003
Normal
0.2
CPT0002270011
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0077310003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0092740003
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0006950001
Normal
0.2
CPT0082010001
Normal
0.1
CPT0065450001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0010170001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0012180003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0079230003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0009060003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0025920001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0075560003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0081600003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0001260009
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0088570001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0000780007
Tumor
-0.3
CPT0075170001
Normal
-0.3
CPT0071150004
Tumor
-0.3
CPT0066480003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0009020003
Normal
-0.3
CPT0015910003
Tumor
-0.3
CPT0009080003
Normal
-0.3
CPT0092190003
Normal
-0.4
CPT0011240003
Tumor
-0.5
CPT0017410003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
