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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RABGGTB is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
87.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
57.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
44.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
44.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
43.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
42.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
42.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
41.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
40.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
40.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
40.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
36.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
36.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
35.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
33.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
33.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
32.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
32.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
30.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
30.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
29.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
29.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
28.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
27.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
27.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
27.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
27.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
26.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
26.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
25.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
25.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
24.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
24.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
24.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
23.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
23.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
23.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
23.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
23.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
23.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
22.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
22.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
22.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
21.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
21.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
21.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
20.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
20.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
20.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
19.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
19.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
19.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
19.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
19.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
19.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
16.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
16.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
15.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
15.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
12.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RABGGTB is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
142.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
136.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
129.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
116.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
114.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
111.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
103.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
102.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
100.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
97.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
97.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
92.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
91.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
91.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
89.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
88.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
86.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
86.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
86.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
85.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
84.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
83.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
83.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
83.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
82.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
81.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
80.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
80.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
79.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
78.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
78.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
78.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
77.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
76.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
76.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
76.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
76.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
76.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
75.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
75.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
75.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
75.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
75.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
74.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
74.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
74.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
74.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
74.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
73.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
73.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
73.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
73.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
73.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
73.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
73.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
72.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
72.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
72.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
71.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
71.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
71.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
71.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
70.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
70.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
70.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
69.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
69.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
69.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
69.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
69.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
69.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
68.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
68.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
68.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
68.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
68.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
68.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
68.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
68.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
68.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
67.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
67.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
67.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
67.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
66.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
66.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
66.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
66.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
66.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
66.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
66.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
66.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
66.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
66.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
66.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
66.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
66.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
66.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
65.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
65.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
65.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
65.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
65.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
65.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
65.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
64.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
64.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
64.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
64.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
64.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
64.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
63.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
63.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
63.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
63.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
63.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
63.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
63.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
63.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
63.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
63.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
62.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
62.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
62.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
61.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
61.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
61.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
61.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
61.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
61.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
61.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
61.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
61.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
61.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
61.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
61.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
61.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
60.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
60.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
60.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
60.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
60.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
60.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
60.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
60.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
60.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
59.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
59.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
59.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
59.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
59.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
59.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
59.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
59.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
59.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
58.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
58.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
58.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
58.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
58.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
58.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
58.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
57.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
57.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
57.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
57.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
57.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
57.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
57.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
57.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
57.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
57.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
56.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
56.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
56.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
56.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
56.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
56.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
56.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
56.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
55.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
55.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
55.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
55.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
54.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
54.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
54.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
54.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
54.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
54.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
54.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
54.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
53.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
53.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
53.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
53.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
53.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
53.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
53.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
52.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
52.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
52.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
52.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
52.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
52.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
52.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
51.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
51.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
51.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
51.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
51.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
51.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
50.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
50.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
50.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
50.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
50.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
50.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
50.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
50.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
49.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
49.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
49.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
49.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
49.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
49.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
49.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
49.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
49.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
49.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
49.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
49.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
49.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
49.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
48.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
48.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
48.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
48.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
48.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
48.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
48.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
47.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
47.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
47.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
47.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
47.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
47.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
47.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
47.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
47.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
47.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
47.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
47.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
46.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
46.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
46.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
46.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
46.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
46.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
46.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
46.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
46.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
46.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
46.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
46.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
46.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
45.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
45.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
45.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
45.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
45.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
45.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
45.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
45.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
45.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
45.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
45.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
44.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
44.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
44.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
44.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
44.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
44.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
44.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
44.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
43.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
43.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
43.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
43.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
43.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
43.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
43.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
43.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
42.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
42.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
42.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
42.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
42.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
42.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
42.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
42.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
42.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
41.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
41.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
41.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
41.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
41.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
41.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
41.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
41.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
41.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
41.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
41.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
41.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
41.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
41.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
40.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
40.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
40.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
40.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
40.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
40.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
40.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
40.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
39.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
39.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
39.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
39.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
39.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
39.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
39.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
39.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
39.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
39.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
38.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
38.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
38.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
38.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
38.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
38.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
38.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
38.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
37.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
37.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
37.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
37.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
37.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
37.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
37.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
37.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
37.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
37.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
37.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
37.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
36.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
36.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
36.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
36.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
36.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
36.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
36.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
35.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
35.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
35.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
35.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
35.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
35.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
35.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
34.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
34.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
34.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
34.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
34.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
34.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
34.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
34.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
34.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
34.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
34.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
34.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
34.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
34.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
34.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
33.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
33.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
33.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
33.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
33.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
33.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
33.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
33.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
33.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
33.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
33.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
33.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
33.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
33.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
33.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
32.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
32.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
32.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
32.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
32.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
31.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
31.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
31.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
31.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
31.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
31.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
30.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
30.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
30.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
30.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
30.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
30.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
30.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
29.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
29.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
29.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
29.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
29.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
29.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
28.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
28.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
28.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
28.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
28.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
28.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
28.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
28.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
28.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
28.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
28.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
28.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
27.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
27.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
27.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
27.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
27.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
27.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
27.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
27.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
27.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
27.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
26.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
26.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
26.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
26.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
26.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
26.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
26.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
26.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
25.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
25.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
25.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
25.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
25.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
25.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
25.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
25.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
25.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
25.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
25.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
25.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
25.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
24.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
24.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
24.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
24.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
23.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
23.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
23.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
23.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
22.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
22.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
22.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
21.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
21.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
21.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
21.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
21.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
21.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
20.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
20.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
20.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
20.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
19.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
19.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
19.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
19.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
19.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
19.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
19.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
18.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
18.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
18.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
18.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
17.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
17.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
17.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
17.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
17.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
16.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
15.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
15.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
15.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
14.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
13.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
12.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
12.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
11.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
10.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RABGGTB is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
63.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
114.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
113.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
113.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
106.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
104.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
100.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
99.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
98.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
95.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
91.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
89.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
89.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
87.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
87.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
85.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
83.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
82.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
82.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
82.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
82.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
82.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
80.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
80.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
79.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
79.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
78.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
78.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
73.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
71.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
71.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
71.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
70.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
70.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
68.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
68.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
68.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
68.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
67.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
67.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
67.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
66.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
64.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
64.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
64.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
64.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
63.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
63.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
63.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
62.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
61.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
60.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
60.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
60.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
60.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
59.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
58.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
58.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
58.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
56.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
55.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
54.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
54.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
54.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
54.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
54.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
53.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
52.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
51.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
51.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
50.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
49.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
49.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
48.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
48.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
48.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
47.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
47.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
47.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
46.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
46.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
45.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
44.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
44.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
43.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
43.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
43.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
42.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
41.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
41.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
41.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
40.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
39.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
39.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
39.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
38.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
37.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
34.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
33.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RABGGTB is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
87.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
83.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
82.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
67.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
66.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
63.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
62.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
61.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
58.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
57.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
56.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
55.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
55.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
55.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
55.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
54.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
52.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
50.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
50.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
50.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
49.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
49.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
49.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
48.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
48.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
47.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
47.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
46.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
46.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
46.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
45.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
45.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
44.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
43.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
43.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
43.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
42.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
42.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
42.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
42.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
42.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
41.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
41.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
41.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
38.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
37.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
36.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
36.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
36.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
35.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
35.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
35.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
34.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
34.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
34.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
34.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
34.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
33.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
33.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
33.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
33.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
33.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
33.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
33.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
33.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
33.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
33.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
32.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
32.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
32.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
32.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
32.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
32.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
32.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
31.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
31.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
31.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
31.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
31.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
31.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
31.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
30.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
30.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
30.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
30.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
30.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
30.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
30.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
30.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
30.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
30.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
29.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
29.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
29.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
29.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
29.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
29.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
29.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
29.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
29.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
29.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
28.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
28.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
28.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
28.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
28.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
28.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
28.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
28.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
28.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
28.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
28.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
28.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
28.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
27.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
27.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
27.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
27.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
27.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
27.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
27.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
27.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
27.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
27.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
27.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
26.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
26.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
26.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
26.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
26.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
26.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
26.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
26.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
26.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
26.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
26.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
26.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
26.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
26.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
25.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
25.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
25.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
25.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
24.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
24.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
24.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
24.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
24.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
24.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
24.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
24.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
24.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
23.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
23.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
23.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
23.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
23.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
23.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
23.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
23.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
23.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
23.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
23.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
23.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
23.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
23.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
23.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
22.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
22.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
22.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
22.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
22.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
22.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
22.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
22.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
22.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
22.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
22.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
21.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
21.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
21.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
21.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
21.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
21.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
20.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
20.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
20.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
20.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
20.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
20.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
20.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
19.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
19.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
19.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
19.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
19.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
19.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
19.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
19.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
18.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
18.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
18.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
18.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
18.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
18.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
18.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
17.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
17.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
17.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
17.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
17.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
17.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
17.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
17.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
16.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
16.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
16.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
16.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
16.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
16.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
16.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
16.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
16.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
16.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
16.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
16.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
16.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
15.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
15.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
14.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
13.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
13.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
12.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
12.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
11.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
11.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
10.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
10.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
10.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
10.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
9.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
7.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
7.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
7.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
6.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001540009
Tumor
0.6
CPT0021240003
Tumor
0.5
CPT0079410003
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0012280003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0000870016
Tumor
0.4
CPT0069160003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0026420001
Normal
0.3
CPT0079430001
Normal
0.3
CPT0081880003
Tumor
0.3
CPT0089020003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0007320003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0088920001
Normal
0.2
CPT0024670003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0064370003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0088550004
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0011240003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0078660003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0065930003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0078510003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0012570003
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0092740003
Normal
0.1
CPT0007870001
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0025610001
Normal
0.1
CPT0010160003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0088640003
Normal
0.0
CPT0001340003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0084560003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0002370001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0092790003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0065750003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0066470004
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0065690003
Tumor
-0.2
CPT0088570001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0012180003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0078530001
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0025170003
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0017410003
Tumor
-0.3
CPT0017850003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.