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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RDX is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
52.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
52.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
51.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
45.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
39.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
35.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
33.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
31.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
31.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
28.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
27.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
25.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
24.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
24.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
24.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
23.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
23.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
21.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
21.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
21.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
21.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
20.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
19.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
19.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
18.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
17.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
15.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
15.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
15.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
14.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
14.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
14.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
13.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
13.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
11.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
10.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
10.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
10.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
9.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
6.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
6.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
4.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
2.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RDX is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
127.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
114.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
79.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
77.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
77.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
75.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
75.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
71.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
71.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
71.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
69.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
67.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
66.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
64.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
64.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
64.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
64.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
64.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
63.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
63.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
63.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
61.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
61.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
61.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
61.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
61.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
60.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
60.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
59.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
59.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
59.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
58.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
57.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
57.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
57.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
57.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
57.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
56.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
56.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
56.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
56.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
56.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
56.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
56.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
56.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
55.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
54.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
54.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
54.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
54.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
54.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
54.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
53.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
53.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
53.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
53.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
53.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
53.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
53.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
52.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
52.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
52.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
52.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
52.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
51.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
51.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
51.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
51.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
51.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
51.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
50.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
50.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
50.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
50.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
49.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
49.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
49.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
49.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
48.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
48.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
48.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
48.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
48.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
48.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
48.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
48.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
48.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
48.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
47.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
47.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
47.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
47.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
47.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
47.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
47.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
47.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
46.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
46.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
46.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
46.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
46.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
46.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
45.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
45.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
45.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
45.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
45.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
45.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
45.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
45.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
44.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
44.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
44.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
44.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
44.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
44.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
44.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
44.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
44.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
44.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
44.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
44.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
44.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
43.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
43.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
43.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
43.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
43.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
43.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
43.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
43.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
43.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
43.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
42.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
42.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
42.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
42.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
42.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
42.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
42.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
42.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
42.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
42.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
42.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
42.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
41.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
41.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
41.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
41.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
41.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
41.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
41.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
41.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
41.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
40.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
40.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
40.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
39.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
39.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
39.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
39.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
39.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
39.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
38.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
38.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
38.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
38.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
38.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
38.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
38.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
38.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
38.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
38.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
37.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
37.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
37.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
37.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
37.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
37.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
37.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
37.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
37.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
37.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
37.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
36.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
36.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
36.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
36.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
35.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
35.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
35.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
35.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
35.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
35.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
35.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
35.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
35.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
35.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
35.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
35.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
35.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
34.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
34.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
34.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
34.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
34.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
34.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
34.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
34.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
34.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
34.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
34.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
34.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
34.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
34.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
34.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
33.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
33.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
33.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
33.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
33.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
33.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
33.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
33.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
33.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
33.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
32.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
32.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
32.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
32.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
32.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
32.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
32.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
32.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
32.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
32.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
31.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
31.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
31.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
31.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
31.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
31.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
31.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
31.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
31.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
30.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
30.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
30.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
30.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
30.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
30.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
30.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
30.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
30.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
29.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
29.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
29.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
29.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
29.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
29.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
29.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
29.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
29.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
29.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
29.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
28.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
28.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
28.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
28.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
28.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
28.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
28.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
28.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
28.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
28.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
27.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
27.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
27.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
27.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
27.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
27.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
27.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
27.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
27.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
27.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
27.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
27.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
26.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
26.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
26.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
26.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
26.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
26.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
25.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
25.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
25.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
25.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
25.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
25.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
25.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
25.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
24.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
24.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
24.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
24.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
24.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
24.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
24.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
24.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
24.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
24.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
24.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
24.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
23.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
23.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
23.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
23.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
23.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
23.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
22.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
22.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
22.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
22.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
22.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
22.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
22.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
22.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
22.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
22.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
22.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
22.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
21.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
21.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
20.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
20.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
20.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
20.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
20.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
20.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
20.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
20.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
20.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
20.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
19.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
19.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
19.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
19.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
19.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
18.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
18.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
18.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
18.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
18.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
18.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
18.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
18.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
18.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
18.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
17.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
17.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
17.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
17.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
17.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
16.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
16.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
16.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
16.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
16.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
15.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
15.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
14.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
14.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
14.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
13.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
13.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
13.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
12.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
12.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
12.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
12.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
10.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
10.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
10.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
10.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
9.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
6.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
6.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
6.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
6.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
6.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
5.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
5.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
5.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
5.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
4.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
4.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
3.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
3.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
3.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
3.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
3.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
3.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
3.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
3.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
2.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
2.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
2.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
2.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
2.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RDX is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
133.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
90.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
89.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
88.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
87.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
87.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
76.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
74.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
74.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
72.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
69.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
68.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
65.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
64.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
64.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
64.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
62.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
62.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
62.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
62.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
61.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
61.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
60.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
59.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
59.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
58.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
58.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
58.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
58.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
57.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
56.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
56.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
53.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
53.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
52.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
52.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
51.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
50.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
50.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
49.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
49.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
48.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
48.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
47.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
47.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
47.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
46.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
46.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
45.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
42.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
42.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
41.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
41.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
41.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
41.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
41.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
40.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
39.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
39.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
39.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
39.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
38.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
38.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
37.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
36.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
35.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
35.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
35.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
34.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
34.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
34.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
33.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
32.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
32.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
32.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
31.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
31.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
31.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
28.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
28.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
28.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
26.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
22.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
22.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
22.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
20.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
17.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
14.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
12.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
12.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
11.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
6.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RDX is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
69.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
54.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
53.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
49.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
48.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
47.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
46.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
45.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
44.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
44.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
43.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
42.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
41.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
39.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
39.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
39.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
38.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
38.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
36.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
36.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
36.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
32.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
32.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
32.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
31.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
31.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
31.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
30.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
30.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
29.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
29.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
29.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
29.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
28.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
28.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
28.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
27.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
27.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
27.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
27.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
27.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
26.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
26.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
25.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
25.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
25.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
24.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
24.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
24.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
24.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
23.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
23.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
23.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
22.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
22.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
22.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
22.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
21.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
21.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
21.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
21.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
21.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
21.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
20.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
20.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
20.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
20.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
20.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
20.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
20.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
19.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
18.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
18.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
18.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
18.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
18.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
18.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
18.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
17.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
17.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
17.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
17.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
16.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
16.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
16.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
15.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
15.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
15.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
15.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
14.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
14.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
14.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
14.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
14.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
13.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
13.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
13.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
13.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
13.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
12.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
12.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
12.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
11.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
10.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
10.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
10.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
10.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
10.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
9.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
9.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
9.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
9.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
9.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
9.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
9.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
9.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
8.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
8.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
8.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
8.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
8.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
7.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
7.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
7.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
7.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
7.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
7.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
7.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
7.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
6.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
5.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
5.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
5.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
5.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
5.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
5.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
5.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
4.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
4.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
4.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
4.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
4.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
3.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
3.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
3.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
3.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
3.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
3.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
3.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
3.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
3.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
2.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
2.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
2.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
2.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
2.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
2.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
1.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
1.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
1.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
1.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
1.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
1.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
0.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
0.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0000790001
Normal
0.5
CPT0014350001
Normal
0.5
CPT0065450001
Normal
0.5
CPT0089480003
Normal
0.5
CPT0077500001
Normal
0.5
CPT0092800003
Normal
0.4
CPT0088920001
Normal
0.4
CPT0001350001
Normal
0.4
CPT0006950001
Normal
0.4
CPT0009080003
Normal
0.4
CPT0023710001
Normal
0.4
CPT0077140001
Normal
0.4
CPT0020130001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0088780001
Normal
0.4
CPT0025060001
Normal
0.4
CPT0079430001
Normal
0.4
CPT0066430001
Normal
0.4
CPT0007470001
Normal
0.4
CPT0081620001
Normal
0.4
CPT0025610001
Normal
0.4
CPT0069010001
Normal
0.4
CPT0018250001
Normal
0.4
CPT0078840001
Normal
0.4
CPT0026420001
Normal
0.3
CPT0076350001
Normal
0.3
CPT0013790003
Normal
0.3
CPT0010170001
Normal
0.3
CPT0082010001
Normal
0.3
CPT0023360001
Normal
0.3
CPT0012770003
Normal
0.3
CPT0006730001
Normal
0.3
CPT0092740003
Normal
0.3
CPT0092310003
Normal
0.3
CPT0075570001
Normal
0.3
CPT0089040001
Normal
0.3
CPT0017450001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0087050003
Normal
0.3
CPT0079000001
Normal
0.3
CPT0069160003
Tumor
0.2
CPT0078940001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0020020001
Normal
0.2
CPT0077490003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0086370003
Normal
0.2
CPT0078530001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0086970003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0001180009
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0007870001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0000660001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0015730003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0075170001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0012900004
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0077110003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0019130003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0087040003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0023690003
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0077320001
Normal
-0.3
CPT0092730003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0023350003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0066480003
Tumor
-0.3
CPT0012550003
Tumor
-0.3
CPT0002270011
Tumor
-0.3
CPT0075560003
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0012280003
Tumor
-0.3
CPT0088550004
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0086820003
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0088630003
Tumor
-0.4
CPT0065430003
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0001500009
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0020120003
Tumor
-0.4
CPT0021240003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0084560003
Tumor
-0.4
CPT0075130003
Tumor
-0.4
CPT0081880003
Tumor
-0.4
CPT0012670003
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0011410003
Tumor
-0.5
CPT0088480003
Tumor
-0.5
CPT0086360003
Tumor
-0.6
CPT0063630003
Tumor
-0.6
CPT0017850003
Tumor
-0.6
CPT0078800003
Tumor
-0.6
CPT0012180003
Tumor
-0.6
CPT0001340003
Tumor
-0.7
CPT0079180003
Tumor
-0.7
CPT0078660003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
