HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:36.7 nTPM
HPA Brain:26.0 nTPM
GTEx:36.7 nTPM
FANTOM5:133.1 Scaled Tags Per Million
Pig:26.8 nTPM
Mouse:8.7 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017065
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 26.0
Sample id Sample description nTPM
Hippocampus
nTPM: 26.0
1898 Male, age 80, left hemisphere 36.3
1855 Male, age 76, left hemisphere 31.3
2148 Female, age 91, left hemisphere 26.3
2529 Female, age 94, left hemisphere 25.1
2621 Female, age 67, right hemisphere 19.0
1911 Female, age 85, right hemisphere 18.0
Dentate gyrus
nTPM: 18.5
2528 Male, age 74, both hemispheres 32.4
2010 Male, age 76, both hemispheres 20.8
2530 Female, age 94, left hemisphere 18.4
2246 Female, age 85, both hemispheres 17.2
1927 Female, age 91, both hemispheres 16.5
2531 Female, age 67, both hemispheres 5.9
Entorhinal gyrus
nTPM: 14.6
2117 Female, age 91, right hemisphere 30.6
1938 Female, age 85, left hemisphere 20.7
1787 Male, age 76, left hemisphere 15.4
2764 Male, age 80, right hemisphere 9.6
2686 Male, age 75, right hemisphere 6.9
2613 Female, age 94, left hemisphere 4.7
Hippocampus, CA1
nTPM: 20.4
2527 Male, age 74, both hemispheres 31.2
1873 Female, age 85, both hemispheres 21.2
2749 Male, age 80, left hemisphere 17.4
2082 Female, age 91, right hemisphere 16.5
2045 Male, age 76, both hemispheres 15.8
Hippocampus, CA2
nTPM: 19.3
2249 Male, age 74, both hemispheres 26.2
1963 Male, age 80, left hemisphere 22.4
2113 Female, age 91, right hemisphere 19.7
1940 Female, age 85, left hemisphere 17.3
1892 Male, age 76, both hemispheres 15.8
2437 Female, age 94, left hemisphere 14.3
Hippocampus, CA3
nTPM: 19.5
2436 Male, age 74, both hemispheres 30.5
1891 Female, age 85, both hemispheres 19.7
1867 Male, age 76, both hemispheres 19.6
2620 Female, age 94, left hemisphere 19.2
2861 Female, age 67, both hemispheres 15.4
2137 Male, age 80, left hemisphere 12.7
Parahippocampal cortex
nTPM: 13.8
2692 Male, age 74, both hemispheres 20.2
1850 Male, age 80, both hemispheres 18.7
2018 Male, age 76, both hemispheres 16.5
2250 Female, age 67, right hemisphere 15.4
1990 Female, age 91, right hemisphere 15.3
2245 Female, age 91, both hemispheres 14.5
1933 Female, age 85, both hemispheres 13.6
2693 Female, age 94, both hemispheres 9.3
2622 Female, age 67, right hemisphere 8.8
2532 Female, age 72, left hemisphere 6.3
Perirhinal gyrus
nTPM: 13.8
1847 Female, age 91, left hemisphere 17.5
1794 Male, age 80, right hemisphere 17.0
1841 Female, age 85, right hemisphere 14.0
2521 Female, age 94, right hemisphere 12.7
2848 Male, age 76, right hemisphere 7.6
Subiculum
nTPM: 19.7
2729 Female, age 91, right hemisphere 34.1
2438 Female, age 94, left hemisphere 23.1
2619 Male, age 74, both hemispheres 17.4
2042 Male, age 76, both hemispheres 15.9
1901 Male, age 80, both hemispheres 13.9
1977 Female, age 85, both hemispheres 13.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 36.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.7
Samples: 197

Max nTPM: 67.0
Min nTPM: 17.1
Std nTPM: 9.8
Median nTPM: 34.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 67.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 66.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 66.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 65.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 60.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 60.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 60.6
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 60.3
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 59.8
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 55.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 55.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 133.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 133.1
FF:10153-102I9 76 years, female 144.8
FF:10169-103B7 60 years, female 121.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 26.8
Pig sample Sample description nTPM
Subiculum
nTPM: 22.9
Samples: 4

Max nTPM: 29.6
Min nTPM: 19.0
Sample A Female 29.6
Sample B Female 19.0
Sample C Male 21.0
Sample D Male 21.9
Dorsal hippocampus
nTPM: 26.8
Samples: 4

Max nTPM: 36.3
Min nTPM: 21.0
Sample A Female 36.3
Sample B Female 21.0
Sample C Male 27.3
Sample D Male 22.7
Entorhinal cortex
nTPM: 21.5
Samples: 4

Max nTPM: 25.9
Min nTPM: 18.7
Sample A Female 25.9
Sample B Female 18.7
Sample C Male 22.6
Sample D Male 18.8
Ventral hippocampus
nTPM: 23.5
Samples: 4

Max nTPM: 30.8
Min nTPM: 17.3
Sample A Female 23.8
Sample B Female 17.3
Sample C Male 22.2
Sample D Male 30.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 8.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.7
Samples: 4

Max nTPM: 10.7
Min nTPM: 6.9
Sample A Male 10.7
Sample B Male 8.8
Sample C Female 6.9
Sample D Female 8.4
Hippocampal formation
nTPM: 5.7
Samples: 4

Max nTPM: 6.3
Min nTPM: 5.0
Sample A Male 6.3
Sample B Male 6.3
Sample C Female 5.3
Sample D Female 5.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69014518 Antisense, RP_050310_01_C05, Mouse strain C57BL/6J (56 days, male) 0.2
74819671 Antisense, RP_060315_02_G10, Mouse strain C57BL/6J (56 days, male) 0.2

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