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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TUBB2A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
71.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
68.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
57.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
54.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
54.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
49.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
48.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
44.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
42.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
38.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
37.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
37.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
35.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
34.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
33.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
32.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
30.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
28.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
26.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
26.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
25.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
25.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
24.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
22.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
21.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
18.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
18.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
18.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
17.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
17.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
16.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
16.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
15.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
14.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
14.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
13.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
13.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
13.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
12.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
10.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
10.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
8.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
7.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
7.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
7.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
7.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
6.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
6.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
3.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
3.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
3.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
2.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TUBB2A is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
178.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
175.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
142.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
122.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
112.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
103.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
87.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
80.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
73.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
68.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
65.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
60.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
59.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
53.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
45.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
45.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
43.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
42.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
41.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
37.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
36.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
36.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
36.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
35.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
35.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
34.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
34.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
33.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
33.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
32.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
32.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
31.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
31.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
30.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
30.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
30.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
29.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
29.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
29.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
28.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
28.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
28.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
28.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
28.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
27.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
27.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
27.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
27.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
25.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
25.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
25.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
24.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
24.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
24.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
24.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
23.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
23.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
23.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
23.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
23.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
23.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
23.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
22.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
22.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
22.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
22.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
21.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
21.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
21.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
21.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
21.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
20.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
20.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
20.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
20.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
20.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
20.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
20.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
20.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
19.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
19.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
19.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
19.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
19.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
19.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
19.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
19.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
19.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
19.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
18.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
18.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
18.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
18.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
18.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
18.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
18.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
18.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
18.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
18.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
18.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
17.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
17.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
17.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
17.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
17.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
17.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
17.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
17.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
17.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
17.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
16.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
16.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
16.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
16.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
16.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
16.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
16.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
16.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
16.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
15.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
15.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
15.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
15.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
15.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
15.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
15.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
15.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
15.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
15.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
15.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
14.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
14.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
14.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
14.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
14.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
14.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
14.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
14.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
14.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
14.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
14.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
14.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
14.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
14.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
14.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
13.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
13.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
13.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
13.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
13.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
13.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
13.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
13.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
13.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
13.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
13.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
13.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
13.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
13.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
13.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
13.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
13.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
13.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
13.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
13.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
12.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
12.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
12.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
12.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
12.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
12.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
12.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
12.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
12.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
12.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
12.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
12.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
12.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
12.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
12.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
12.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
12.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
12.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
12.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
11.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
11.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
11.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
11.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
11.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
11.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
11.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
11.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
11.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
11.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
11.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
11.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
11.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
11.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
11.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
11.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
10.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
10.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
10.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
10.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
10.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
10.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
10.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
10.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
10.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
10.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
10.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
10.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
10.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
10.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
10.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
10.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
10.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
10.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
9.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
9.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
9.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
9.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
9.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
9.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
9.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
9.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
9.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
9.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
9.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
9.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
9.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
9.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
9.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
9.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
9.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
9.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
9.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
9.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
9.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
9.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
9.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
9.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
9.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
8.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
8.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
8.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
8.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
8.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
8.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
8.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
8.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
8.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
8.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
8.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
8.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
8.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
8.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
8.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
8.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
8.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
8.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
7.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
7.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
7.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
7.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
7.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
7.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
7.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
7.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
7.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
7.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
7.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
7.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
7.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
7.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
7.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
7.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
7.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
7.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
6.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
6.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
6.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
6.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
6.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
6.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
6.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
6.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
6.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
6.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
6.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
6.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
6.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
6.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
6.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
6.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
6.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
6.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
6.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
6.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
6.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
6.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
6.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
6.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
6.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
6.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
5.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
5.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
5.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
5.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
5.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
5.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
5.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
5.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
5.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
5.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
5.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
5.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
5.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
4.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
4.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
4.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
4.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
4.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
4.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
4.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
4.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
4.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
3.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
3.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
3.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TUBB2A is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
90.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
81.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
59.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
51.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
49.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
43.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
39.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
33.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
31.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
30.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
23.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
21.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
21.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
21.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
18.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
18.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
16.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
16.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
16.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
15.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
15.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
14.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
14.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
14.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
14.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
14.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
14.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
14.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
13.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
13.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
12.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
12.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
12.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
12.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
11.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
11.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
10.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
10.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
9.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
9.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
9.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
9.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
9.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
9.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
9.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
8.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
8.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
8.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
8.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
8.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
8.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
8.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
8.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
7.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
7.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
7.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
7.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
7.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
7.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
7.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
7.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
7.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
7.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
6.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
6.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
6.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
6.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
6.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
6.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
6.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
6.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
6.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
5.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
4.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
4.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
4.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
4.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
3.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
3.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TUBB2A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
143.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
108.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
107.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
102.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
93.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
89.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
85.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
79.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
75.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
74.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
72.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
68.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
67.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
64.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
63.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
60.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
58.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
58.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
54.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
54.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
53.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
52.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
52.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
52.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
52.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
51.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
51.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
50.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
50.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
49.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
49.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
49.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
48.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
48.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
48.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
47.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
46.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
46.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
45.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
45.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
45.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
44.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
43.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
43.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
42.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
42.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
41.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
41.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
41.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
41.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
41.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
40.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
40.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
40.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
40.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
40.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
39.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
39.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
39.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
38.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
38.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
38.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
38.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
38.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
38.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
38.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
37.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
37.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
37.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
37.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
37.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
37.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
36.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
36.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
36.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
36.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
35.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
35.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
35.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
35.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
35.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
35.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
34.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
34.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
34.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
34.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
34.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
34.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
34.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
34.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
33.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
33.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
33.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
33.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
33.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
33.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
33.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
33.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
33.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
32.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
32.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
32.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
32.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
32.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
32.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
31.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
31.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
31.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
31.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
30.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
30.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
30.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
30.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
30.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
30.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
29.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
29.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
29.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
29.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
29.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
28.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
28.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
28.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
28.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
27.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
26.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
26.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
26.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
26.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
26.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
26.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
26.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
26.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
25.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
25.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
25.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
25.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
25.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
25.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
25.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
25.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
24.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
24.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
24.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
24.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
24.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
23.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
23.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
23.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
23.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
23.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
23.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
23.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
23.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
23.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
22.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
22.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
22.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
21.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
21.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
21.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
21.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
20.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
20.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
20.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
20.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
19.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
19.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
19.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
19.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
19.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
18.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
18.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
18.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
18.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
18.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
17.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
17.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
17.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
16.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
16.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
16.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
16.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
16.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
15.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
15.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
15.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
15.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
15.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
15.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
15.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
15.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
14.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
14.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
14.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
13.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
13.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
13.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
13.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
12.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
12.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
12.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
12.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
12.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
12.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
11.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
11.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
11.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
11.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
11.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
11.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
10.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
10.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
10.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
9.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
9.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
8.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
8.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
8.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
7.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
7.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
5.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
5.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
4.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
4.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
3.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
3.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
2.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
2.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078800003
Tumor
0.5
CPT0011410003
Tumor
0.4
CPT0084560003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0076350001
Normal
0.3
CPT0002270011
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0065450001
Normal
0.2
CPT0017410003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0025060001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0077310003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0077500001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0076330003
Tumor
0.2
CPT0000890001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0082010001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0012920003
Normal
0.2
CPT0092800003
Normal
0.2
CPT0011240003
Tumor
0.2
CPT0025610001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0077140001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0081880003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0066520001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0092310003
Normal
0.1
CPT0075570001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0010170001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0012550003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0087050003
Normal
0.1
CPT0014470001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0079430001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0078840001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0079000001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0084590001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0019990003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0012180003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0086950003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0078990003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0081600003
Tumor
-0.2
CPT0079410003
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0065870003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0001340003
Tumor
-0.2
CPT0001180009
Tumor
-0.2
CPT0071150004
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0088550004
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
