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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TINAG is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
38.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
10.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
8.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
6.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
5.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
4.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
3.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
3.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
3.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
3.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
2.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
1.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
1.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TINAG is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
141.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
119.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
104.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
100.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
98.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
97.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
96.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
95.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
89.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
88.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
87.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
85.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
81.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
79.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
79.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
79.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
76.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
75.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
75.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
75.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
75.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
74.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
72.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
72.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
71.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
70.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
70.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
69.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
68.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
67.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
64.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
64.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
63.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
63.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
62.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
61.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
61.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
60.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
60.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
59.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
59.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
59.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
58.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
58.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
58.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
57.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
57.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
57.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
56.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
56.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
56.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
56.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
56.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
55.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
55.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
55.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
54.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
52.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
51.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
51.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
51.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
51.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
50.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
49.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
49.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
48.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
48.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
48.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
47.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
47.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
47.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
47.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
47.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
46.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
46.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
46.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
46.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
45.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
45.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
45.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
45.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
44.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
44.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
44.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
44.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
44.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
44.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
43.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
43.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
43.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
43.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
43.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
42.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
42.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
42.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
42.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
42.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
41.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
41.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
40.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
39.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
39.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
39.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
39.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
39.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
39.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
38.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
38.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
38.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
38.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
38.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
38.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
38.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
38.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
37.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
37.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
37.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
37.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
37.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
36.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
36.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
36.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
36.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
36.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
36.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
36.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
36.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
35.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
35.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
35.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
35.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
35.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
35.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
34.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
34.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
34.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
34.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
34.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
34.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
34.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
34.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
33.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
33.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
33.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
33.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
33.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
33.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
32.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
32.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
32.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
32.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
32.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
32.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
32.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
32.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
32.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
32.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
32.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
31.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
31.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
31.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
31.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
31.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
31.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
31.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
31.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
31.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
30.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
30.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
30.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
30.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
30.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
30.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
30.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
29.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
29.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
29.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
29.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
29.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
29.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
29.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
29.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
29.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
29.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
28.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
28.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
28.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
28.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
27.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
27.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
27.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
27.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
27.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
27.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
26.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
26.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
26.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
26.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
25.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
25.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
25.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
25.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
24.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
24.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
24.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
24.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
24.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
23.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
23.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
23.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
23.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
22.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
22.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
22.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
22.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
22.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
22.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
21.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
21.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
21.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
21.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
21.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
21.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
20.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
20.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
20.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
20.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
20.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
20.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
20.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
20.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
20.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
20.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
20.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
19.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
19.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
19.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
18.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
18.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
18.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
18.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
18.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
18.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
18.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
18.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
18.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
18.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
18.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
18.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
18.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
17.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
17.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
17.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
17.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
16.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
16.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
16.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
16.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
16.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
16.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
16.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
16.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
15.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
15.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
15.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
15.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
15.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
14.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
14.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
13.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
13.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
13.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
12.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
12.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
12.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
12.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
12.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
12.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
12.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
11.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
11.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
11.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
11.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
11.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
11.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
11.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
10.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
9.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
9.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
9.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
9.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
9.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
9.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
9.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
8.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
8.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
8.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
8.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
8.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
8.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
8.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
8.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
7.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
7.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
7.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
7.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
7.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
7.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
6.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
6.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
6.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
6.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
6.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
6.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
6.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
6.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
6.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
6.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
5.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
5.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
5.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
5.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
5.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
5.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
5.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
5.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
5.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
4.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
4.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
4.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
4.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
4.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
4.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
4.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
4.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
4.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
4.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
4.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
4.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
4.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
3.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
3.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
3.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
3.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
3.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
3.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
3.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
3.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
3.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
3.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
3.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
2.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
2.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
2.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
2.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
2.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
2.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
2.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
2.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
2.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
2.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
2.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
2.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
1.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
1.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
1.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
1.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
1.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
1.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
1.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
1.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
1.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
1.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
1.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
1.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
1.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
0.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
0.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
0.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
0.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
0.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
0.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
0.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
0.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
0.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
0.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
0.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
0.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
0.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
0.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
0.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
0.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
0.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
0.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
0.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
0.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
0.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
0.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
0.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TINAG is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
290.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
175.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
100.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
93.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
87.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
82.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
81.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
74.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
70.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
69.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
67.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
65.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
60.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
58.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
58.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
57.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
57.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
54.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
52.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
51.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
50.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
49.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
48.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
48.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
47.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
46.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
46.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
42.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
42.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
41.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
40.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
39.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
36.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
35.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
33.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
32.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
32.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
30.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
29.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
28.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
28.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
27.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
27.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
27.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
26.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
26.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
25.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
23.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
22.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
21.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
20.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
20.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
18.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
18.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
17.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
17.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
17.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
16.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
16.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
16.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
16.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
12.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
11.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
9.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
8.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
7.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
7.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
7.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
6.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
6.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
6.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
6.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
3.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
3.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
2.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
1.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
0.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
0.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
0.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
0.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TINAG is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
156.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
146.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
131.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
130.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
124.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
120.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
116.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
111.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
110.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
106.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
99.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
96.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
91.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
91.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
81.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
80.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
80.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
75.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
70.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
69.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
68.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
66.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
66.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
65.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
64.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
62.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
62.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
62.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
62.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
60.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
60.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
59.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
59.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
58.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
57.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
57.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
56.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
56.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
56.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
55.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
54.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
53.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
53.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
52.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
51.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
51.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
50.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
49.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
49.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
49.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
49.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
48.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
47.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
47.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
46.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
46.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
46.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
45.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
45.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
44.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
44.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
43.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
43.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
43.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
42.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
41.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
41.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
41.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
41.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
40.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
40.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
39.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
38.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
38.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
38.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
38.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
37.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
37.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
37.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
36.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
36.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
36.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
36.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
35.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
33.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
33.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
33.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
33.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
33.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
32.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
32.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
32.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
31.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
31.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
31.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
31.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
31.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
31.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
30.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
30.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
30.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
30.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
30.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
30.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
29.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
29.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
29.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
29.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
28.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
28.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
28.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
28.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
27.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
27.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
27.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
27.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
27.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
27.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
26.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
26.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
26.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
26.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
26.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
26.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
26.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
26.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
26.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
25.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
25.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
25.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
25.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
24.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
24.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
24.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
24.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
24.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
24.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
24.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
24.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
24.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
23.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
23.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
23.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
23.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
23.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
22.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
22.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
22.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
21.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
21.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
21.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
21.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
20.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
20.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
20.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
20.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
20.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
19.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
19.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
19.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
19.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
18.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
18.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
18.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
18.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
18.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
17.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
17.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
17.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
17.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
17.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
16.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
16.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
15.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
15.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
15.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
15.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
15.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
14.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
14.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
14.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
14.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
13.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
13.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
13.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
13.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
12.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
12.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
12.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
12.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
12.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
11.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
11.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
11.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
11.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
11.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
10.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
9.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
9.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
9.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
9.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
8.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
7.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
7.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
7.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
7.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
7.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
6.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
6.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
4.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
3.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
3.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
3.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
3.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
2.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
2.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
2.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
2.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
2.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
2.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
2.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
2.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
2.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
2.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
2.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
2.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
1.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
1.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
1.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
1.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
0.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
0.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
0.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0025060001
Normal
1.4
CPT0006950001
Normal
1.4
CPT0006730001
Normal
1.4
CPT0077140001
Normal
1.4
CPT0000890001
Normal
1.3
CPT0012770003
Normal
1.3
CPT0026420001
Normal
1.3
CPT0020020001
Normal
1.2
CPT0000790001
Normal
1.2
CPT0001350001
Normal
1.2
CPT0088920001
Normal
1.1
CPT0010170001
Normal
1.1
CPT0089480003
Normal
1.1
CPT0088780001
Normal
1.1
CPT0082010001
Normal
1.1
CPT0020130001
Normal
1.1
CPT0023710001
Normal
1.0
CPT0066430001
Normal
1.0
CPT0065820001
Normal
1.0
CPT0065450001
Normal
1.0
CPT0088710001
Normal
1.0
CPT0014350001
Normal
0.9
CPT0092800003
Normal
0.9
CPT0092310003
Normal
0.9
CPT0089040001
Normal
0.9
CPT0012090003
Normal
0.9
CPT0086970003
Normal
0.9
CPT0023360001
Normal
0.8
CPT0006530001
Normal
0.8
CPT0086370003
Normal
0.8
CPT0087050003
Normal
0.8
CPT0025610001
Normal
0.8
CPT0077500001
Normal
0.8
CPT0007870001
Normal
0.8
CPT0001190001
Normal
0.8
CPT0092740003
Normal
0.7
CPT0078530001
Normal
0.7
CPT0018250001
Normal
0.7
CPT0012290003
Normal
0.7
CPT0007470001
Normal
0.7
CPT0078840001
Normal
0.7
CPT0076350001
Normal
0.7
CPT0081620001
Normal
0.6
CPT0012570003
Normal
0.6
CPT0001510001
Normal
0.6
CPT0009080003
Normal
0.6
CPT0017450001
Normal
0.6
CPT0079430001
Normal
0.6
CPT0088570001
Normal
0.6
CPT0019160001
Normal
0.6
CPT0066520001
Normal
0.6
CPT0063640001
Normal
0.6
CPT0025920001
Normal
0.5
CPT0078940001
Normal
0.5
CPT0069010001
Normal
0.5
CPT0078670001
Normal
0.5
CPT0014130001
Normal
0.5
CPT0012920003
Normal
0.5
CPT0088500001
Normal
0.5
CPT0075570001
Normal
0.5
CPT0079000001
Normal
0.4
CPT0086890003
Normal
0.4
CPT0014470001
Normal
0.4
CPT0001270001
Normal
0.4
CPT0013790003
Normal
0.4
CPT0086830003
Normal
0.4
CPT0000660001
Normal
0.4
CPT0024680001
Normal
0.4
CPT0084590001
Normal
0.3
CPT0001230001
Normal
0.3
CPT0009020003
Normal
0.2
CPT0088640003
Normal
0.2
CPT0064400001
Normal
0.2
CPT0063330001
Normal
0.2
CPT0010120001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0075170001
Normal
0.1
CPT0077320001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0078800003
Tumor
-0.3
CPT0092190003
Normal
-0.4
CPT0069190001
Normal
-0.4
CPT0001500009
Tumor
-0.7
CPT0092290003
Tumor
-0.8
CPT0001540009
Tumor
-0.8
CPT0092790003
Tumor
-0.9
CPT0012640003
Normal
-0.9
CPT0078510003
Tumor
-0.9
CPT0012900004
Tumor
-0.9
CPT0079300001
Normal
-1.0
CPT0023690003
Tumor
-1.0
CPT0063320003
Tumor
-1.0
CPT0019990003
Tumor
-1.0
CPT0066470004
Tumor
-1.0
CPT0014160003
Tumor
-1.1
CPT0017850003
Tumor
-1.1
CPT0011240003
Tumor
-1.1
CPT0007860003
Tumor
-1.1
CPT0026410003
Tumor
-1.2
CPT0075560003
Tumor
-1.2
CPT0001220008
Tumor
-1.2
CPT0065810003
Tumor
-1.3
CPT0015910003
Tumor
-1.3
CPT0077310003
Tumor
-1.3
CPT0066480003
Tumor
-1.3
CPT0079510001
Normal
-1.3
CPT0025170003
Tumor
-1.3
CPT0086360003
Tumor
-1.3
CPT0076330003
Tumor
-1.4
CPT0006630003
Tumor
-1.4
CPT0079270003
Tumor
-1.4
CPT0002270011
Tumor
-1.4
CPT0087040003
Tumor
-1.4
CPT0009060003
Tumor
-1.5
CPT0089460004
Tumor
-1.5
CPT0088760003
Tumor
-1.5
CPT0064370003
Tumor
-1.5
CPT0000870016
Tumor
-1.5
CPT0006900003
Tumor
-1.5
CPT0000780007
Tumor
-1.5
CPT0006440003
Tumor
-1.6
CPT0065430003
Tumor
-1.6
CPT0010160003
Tumor
-1.6
CPT0092730003
Tumor
-1.6
CPT0012550003
Tumor
-1.6
CPT0079480003
Tumor
-1.6
CPT0020120003
Tumor
-1.6
CPT0078830003
Tumor
-1.6
CPT0065870003
Tumor
-1.6
CPT0000640003
Tumor
-1.6
CPT0009000003
Tumor
-1.6
CPT0092160003
Tumor
-1.7
CPT0012280003
Tumor
-1.7
CPT0012370003
Tumor
-1.7
CPT0010110003
Tumor
-1.7
CPT0081990003
Tumor
-1.7
CPT0077490003
Tumor
-1.7
CPT0069160003
Tumor
-1.7
CPT0088970003
Tumor
-1.8
CPT0025050003
Tumor
-1.8
CPT0088900003
Tumor
-1.8
CPT0075720003
Tumor
-1.8
CPT0088690003
Tumor
-1.8
CPT0002350011
Tumor
-1.8
CPT0019130003
Tumor
-1.8
CPT0007320003
Tumor
-1.8
CPT0014370004
Tumor
-1.8
CPT0071150004
Tumor
-1.8
CPT0078930003
Tumor
-1.8
CPT0025580004
Tumor
-1.9
CPT0063630003
Tumor
-1.9
CPT0088480003
Tumor
-1.9
CPT0017410003
Tumor
-1.9
CPT0021240003
Tumor
-1.9
CPT0079230003
Tumor
-1.9
CPT0069000003
Tumor
-1.9
CPT0001260009
Tumor
-1.9
CPT0079180003
Tumor
-1.9
CPT0023350003
Tumor
-1.9
CPT0077110003
Tumor
-2.0
CPT0078990003
Tumor
-2.0
CPT0089020003
Tumor
-2.0
CPT0001340003
Tumor
-2.0
CPT0025880003
Tumor
-2.0
CPT0086820003
Tumor
-2.0
CPT0024670003
Tumor
-2.1
CPT0088550004
Tumor
-2.1
CPT0079410003
Tumor
-2.1
CPT0086950003
Tumor
-2.1
CPT0014450004
Tumor
-2.1
CPT0012180003
Tumor
-2.1
CPT0084560003
Tumor
-2.1
CPT0075130003
Tumor
-2.2
CPT0081600003
Tumor
-2.3
CPT0012080003
Tumor
-2.3
CPT0012670003
Tumor
-2.3
CPT0088630003
Tumor
-2.3
CPT0078660003
Tumor
-2.4
CPT0001180009
Tumor
-2.4
CPT0086870003
Tumor
-2.4
CPT0015810003
Tumor
-2.6
CPT0086030003
Tumor
-2.7
CPT0025110003
Tumor
-2.9
CPT0065750003
Tumor
-2.9
CPT0015730003
Tumor
-3.2
CPT0079380003
Tumor
-3.3
CPT0065930003
Tumor
-3.3
CPT0025230003
Tumor
-3.4
CPT0085670003
Tumor
-3.5
CPT0025350003
Tumor
-3.7
CPT0065690003
Tumor
-3.8
CPT0081880003
Tumor
-4.3
CPT0025290003
Tumor
-4.4
CPT0011410003
Tumor
-4.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.