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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNPY3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
96.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
75.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
58.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
55.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
49.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
45.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
43.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
40.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
40.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
35.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
33.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
33.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
33.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
32.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
32.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
30.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
30.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
29.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
29.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
28.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
27.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
27.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
26.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
26.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
25.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
24.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
21.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
20.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
19.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
19.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
19.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
19.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
19.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
19.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
18.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
17.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
17.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
16.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
16.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
16.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
15.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
15.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
15.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
14.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
13.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
12.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
12.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
11.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
11.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
11.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
11.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
11.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
10.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
10.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
10.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
10.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
9.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNPY3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
63.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
256.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
157.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
140.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
134.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
131.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
118.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
116.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
116.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
114.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
112.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
111.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
111.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
110.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
108.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
108.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
105.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
105.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
103.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
101.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
100.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
100.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
100.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
99.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
99.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
96.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
95.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
95.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
94.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
94.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
93.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
93.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
92.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
91.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
91.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
91.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
91.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
90.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
90.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
90.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
89.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
89.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
88.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
88.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
88.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
88.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
87.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
87.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
87.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
86.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
86.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
86.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
86.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
86.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
85.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
84.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
84.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
84.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
84.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
84.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
84.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
84.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
84.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
83.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
83.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
83.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
83.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
83.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
83.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
82.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
82.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
82.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
82.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
82.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
81.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
81.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
81.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
81.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
81.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
80.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
80.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
80.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
80.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
80.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
80.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
80.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
79.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
79.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
79.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
79.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
79.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
79.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
79.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
78.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
78.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
78.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
78.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
78.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
78.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
78.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
77.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
77.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
77.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
77.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
77.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
77.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
77.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
77.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
77.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
77.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
77.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
77.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
77.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
76.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
76.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
76.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
76.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
76.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
76.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
76.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
76.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
76.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
76.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
75.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
75.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
75.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
75.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
75.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
75.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
75.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
75.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
75.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
75.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
75.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
74.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
74.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
74.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
74.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
74.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
74.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
74.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
73.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
73.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
73.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
73.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
73.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
73.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
73.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
72.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
72.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
72.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
72.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
72.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
72.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
72.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
72.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
71.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
71.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
71.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
71.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
71.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
71.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
71.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
71.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
70.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
70.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
70.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
70.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
70.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
70.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
69.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
69.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
69.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
69.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
69.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
69.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
69.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
69.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
69.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
69.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
68.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
68.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
68.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
68.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
68.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
68.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
68.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
68.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
67.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
67.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
67.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
67.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
67.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
67.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
67.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
67.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
67.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
67.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
67.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
67.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
66.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
66.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
66.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
66.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
66.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
66.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
66.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
65.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
65.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
65.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
65.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
65.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
65.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
65.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
65.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
65.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
65.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
65.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
65.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
65.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
65.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
65.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
64.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
64.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
64.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
64.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
64.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
64.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
64.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
64.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
64.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
64.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
64.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
64.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
64.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
64.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
64.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
64.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
63.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
63.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
63.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
63.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
63.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
63.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
63.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
63.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
63.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
63.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
63.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
63.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
63.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
62.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
62.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
62.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
62.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
62.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
62.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
62.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
62.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
62.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
62.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
62.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
62.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
62.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
62.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
62.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
62.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
61.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
61.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
61.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
61.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
61.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
61.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
61.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
61.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
61.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
61.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
61.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
61.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
61.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
61.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
61.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
61.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
61.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
61.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
60.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
60.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
60.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
60.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
60.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
60.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
60.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
60.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
60.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
60.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
60.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
60.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
60.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
60.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
59.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
59.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
59.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
59.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
59.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
59.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
59.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
59.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
59.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
59.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
59.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
59.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
58.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
58.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
58.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
58.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
58.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
58.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
58.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
58.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
58.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
58.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
58.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
58.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
57.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
57.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
57.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
57.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
57.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
57.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
57.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
57.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
57.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
57.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
57.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
57.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
57.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
57.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
57.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
56.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
56.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
56.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
56.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
56.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
56.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
56.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
56.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
56.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
56.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
55.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
55.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
55.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
55.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
55.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
55.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
55.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
55.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
55.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
55.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
55.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
55.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
55.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
55.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
55.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
55.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
55.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
55.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
54.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
54.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
54.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
54.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
54.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
54.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
54.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
54.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
54.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
54.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
54.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
54.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
53.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
53.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
53.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
53.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
53.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
53.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
53.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
52.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
52.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
52.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
52.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
52.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
52.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
52.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
52.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
51.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
51.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
51.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
51.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
51.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
51.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
51.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
51.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
51.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
51.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
51.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
51.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
51.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
51.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
51.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
51.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
50.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
50.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
50.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
49.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
49.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
49.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
49.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
49.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
49.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
49.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
49.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
49.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
48.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
48.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
48.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
48.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
48.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
48.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
48.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
48.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
48.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
48.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
47.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
47.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
47.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
47.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
47.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
47.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
47.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
47.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
47.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
47.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
47.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
46.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
46.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
46.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
46.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
46.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
46.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
45.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
45.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
45.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
45.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
45.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
45.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
45.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
44.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
44.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
44.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
44.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
44.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
44.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
43.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
43.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
43.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
43.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
42.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
42.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
42.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
42.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
42.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
42.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
42.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
42.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
41.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
41.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
41.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
41.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
41.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
40.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
40.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
40.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
40.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
39.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
39.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
39.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
39.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
39.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
37.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
37.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
36.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
36.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
35.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
35.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
35.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
35.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
34.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
34.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
34.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
34.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
33.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
33.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
33.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
32.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
31.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
31.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
31.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
31.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
27.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
27.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
23.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
22.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
20.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
20.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
17.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
14.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
14.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
12.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
8.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNPY3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
64.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
174.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
133.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
108.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
97.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
96.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
95.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
93.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
93.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
92.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
91.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
87.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
87.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
86.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
84.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
84.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
82.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
82.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
81.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
80.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
80.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
78.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
77.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
77.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
75.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
75.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
73.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
73.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
71.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
71.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
71.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
70.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
70.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
70.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
67.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
67.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
66.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
66.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
66.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
65.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
65.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
64.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
64.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
63.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
63.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
63.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
63.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
63.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
61.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
60.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
60.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
59.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
59.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
59.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
58.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
58.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
58.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
58.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
58.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
58.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
57.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
56.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
56.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
56.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
55.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
55.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
54.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
54.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
53.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
52.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
52.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
52.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
51.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
51.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
51.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
50.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
50.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
49.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
49.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
49.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
49.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
48.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
48.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
47.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
47.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
46.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
46.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
46.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
46.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
45.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
44.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
43.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
43.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
42.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
42.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
41.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
39.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
37.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
33.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNPY3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
89.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
483.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
309.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
260.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
236.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
224.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
194.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
184.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
183.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
177.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
159.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
158.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
158.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
157.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
152.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
147.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
146.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
145.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
144.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
144.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
143.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
142.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
139.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
139.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
139.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
137.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
137.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
135.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
135.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
135.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
132.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
129.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
127.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
127.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
126.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
125.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
125.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
125.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
124.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
124.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
123.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
122.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
122.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
121.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
120.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
119.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
119.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
117.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
117.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
115.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
115.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
114.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
114.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
114.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
114.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
113.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
113.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
113.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
112.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
112.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
111.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
111.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
110.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
110.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
109.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
108.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
108.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
108.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
108.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
107.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
105.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
105.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
104.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
103.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
103.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
103.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
103.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
102.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
102.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
101.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
100.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
99.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
99.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
99.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
99.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
98.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
98.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
97.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
97.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
97.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
96.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
95.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
95.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
94.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
94.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
93.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
93.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
93.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
93.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
92.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
92.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
91.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
91.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
91.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
89.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
88.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
88.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
87.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
87.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
87.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
87.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
87.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
87.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
87.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
87.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
86.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
86.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
86.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
86.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
85.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
85.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
85.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
85.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
85.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
85.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
85.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
85.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
84.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
83.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
83.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
83.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
83.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
83.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
83.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
83.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
83.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
83.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
83.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
82.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
82.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
82.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
82.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
82.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
82.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
82.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
81.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
81.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
81.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
81.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
81.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
80.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
80.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
80.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
80.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
79.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
79.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
79.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
79.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
78.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
78.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
78.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
77.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
77.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
76.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
76.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
76.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
75.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
75.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
75.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
75.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
75.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
75.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
75.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
74.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
74.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
74.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
74.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
74.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
73.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
73.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
72.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
71.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
71.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
71.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
71.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
71.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
70.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
70.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
70.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
69.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
69.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
69.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
68.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
67.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
67.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
67.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
67.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
66.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
66.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
66.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
66.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
65.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
65.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
65.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
64.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
64.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
64.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
64.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
64.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
63.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
63.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
63.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
63.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
63.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
63.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
63.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
62.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
62.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
62.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
62.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
62.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
62.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
62.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
62.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
61.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
61.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
61.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
61.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
60.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
60.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
60.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
60.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
60.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
59.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
59.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
58.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
58.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
57.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
57.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
57.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
57.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
56.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
55.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
55.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
55.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
55.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
54.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
54.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
54.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
53.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
53.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
51.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
49.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
49.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
49.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
49.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
48.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
48.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
47.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
46.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
46.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
46.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
46.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
46.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
45.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
43.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
40.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
40.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
38.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
37.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
37.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
36.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
35.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
35.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
35.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
34.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
33.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
32.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
30.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
29.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
29.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
28.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
12.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
1.6
CPT0025110003
Tumor
1.2
CPT0076330003
Tumor
1.2
CPT0017410003
Tumor
1.1
CPT0079270003
Tumor
1.0
CPT0075130003
Tumor
0.9
CPT0075170001
Normal
0.7
CPT0078800003
Tumor
0.7
CPT0001340003
Tumor
0.7
CPT0001260009
Tumor
0.7
CPT0063630003
Tumor
0.7
CPT0010110003
Tumor
0.7
CPT0079380003
Tumor
0.6
CPT0012180003
Tumor
0.6
CPT0069160003
Tumor
0.6
CPT0086950003
Tumor
0.6
CPT0088690003
Tumor
0.6
CPT0001540009
Tumor
0.6
CPT0009060003
Tumor
0.6
CPT0000640003
Tumor
0.5
CPT0084560003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0079410003
Tumor
0.5
CPT0077110003
Tumor
0.5
CPT0086360003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0012370003
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0085670003
Tumor
0.5
CPT0065430003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0088900003
Tumor
0.4
CPT0025350003
Tumor
0.4
CPT0009000003
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0092190003
Normal
0.4
CPT0002270011
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0065870003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0084590001
Normal
0.4
CPT0071150004
Tumor
0.4
CPT0086870003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0017450001
Normal
0.3
CPT0011410003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0081600003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0010160003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0010120001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0025230003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0078530001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0012290003
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0069000003
Tumor
-0.2
CPT0025060001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0025290003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0092790003
Tumor
-0.2
CPT0088570001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0089040001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0014450004
Tumor
-0.3
CPT0069010001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0006630003
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0001550001
Normal
-0.3
CPT0065750003
Tumor
-0.3
CPT0023360001
Normal
-0.3
CPT0000890001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0009080003
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0086970003
Normal
-0.4
CPT0086030003
Tumor
-0.4
CPT0025920001
Normal
-0.4
CPT0025610001
Normal
-0.4
CPT0081620001
Normal
-0.4
CPT0088640003
Normal
-0.4
CPT0020130001
Normal
-0.4
CPT0078510003
Tumor
-0.4
CPT0079300001
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0077500001
Normal
-0.4
CPT0002370001
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0014350001
Normal
-0.4
CPT0089480003
Normal
-0.4
CPT0010170001
Normal
-0.4
CPT0092310003
Normal
-0.4
CPT0006730001
Normal
-0.4
CPT0001510001
Normal
-0.4
CPT0065450001
Normal
-0.4
CPT0086890003
Normal
-0.5
CPT0019160001
Normal
-0.5
CPT0077140001
Normal
-0.5
CPT0079000001
Normal
-0.5
CPT0092800003
Normal
-0.5
CPT0000790001
Normal
-0.5
CPT0066430001
Normal
-0.5
CPT0086370003
Normal
-0.5
CPT0012770003
Normal
-0.5
CPT0088920001
Normal
-0.6
CPT0064400001
Normal
-0.6
CPT0007870001
Normal
-0.6
CPT0092740003
Normal
-0.6
CPT0006950001
Normal
-0.6
CPT0026420001
Normal
-0.6
CPT0087050003
Normal
-0.6
CPT0088780001
Normal
-0.6
CPT0078660003
Tumor
-0.7
CPT0079180003
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
