HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:33.6 nTPM
HPA Brain:55.5 nTPM
GTEx:33.6 nTPM
FANTOM5:26.4 Scaled Tags Per Million
Pig:19.6 nTPM
Mouse:53.5 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016560
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 55.5
Sample id Sample description nTPM
Hippocampus
nTPM: 55.5
2621 Female, age 67, right hemisphere 63.8
2148 Female, age 91, left hemisphere 58.1
1855 Male, age 76, left hemisphere 57.6
1898 Male, age 80, left hemisphere 52.9
1911 Female, age 85, right hemisphere 51.9
2529 Female, age 94, left hemisphere 48.5
Dentate gyrus
nTPM: 50.5
2530 Female, age 94, left hemisphere 58.0
2531 Female, age 67, both hemispheres 55.1
2010 Male, age 76, both hemispheres 52.8
2246 Female, age 85, both hemispheres 49.4
1927 Female, age 91, both hemispheres 46.2
2528 Male, age 74, both hemispheres 41.5
Entorhinal gyrus
nTPM: 54.2
2613 Female, age 94, left hemisphere 64.6
2117 Female, age 91, right hemisphere 57.6
1787 Male, age 76, left hemisphere 55.1
2764 Male, age 80, right hemisphere 53.3
2686 Male, age 75, right hemisphere 47.5
1938 Female, age 85, left hemisphere 47.4
Hippocampus, CA1
nTPM: 48.6
2045 Male, age 76, both hemispheres 52.3
2082 Female, age 91, right hemisphere 51.9
1873 Female, age 85, both hemispheres 47.1
2749 Male, age 80, left hemisphere 46.9
2527 Male, age 74, both hemispheres 45.1
Hippocampus, CA2
nTPM: 50.6
1940 Female, age 85, left hemisphere 61.1
2437 Female, age 94, left hemisphere 53.1
1892 Male, age 76, both hemispheres 50.4
2113 Female, age 91, right hemisphere 50.2
1963 Male, age 80, left hemisphere 48.7
2249 Male, age 74, both hemispheres 40.1
Hippocampus, CA3
nTPM: 48.2
2861 Female, age 67, both hemispheres 57.4
1867 Male, age 76, both hemispheres 50.1
2620 Female, age 94, left hemisphere 47.7
2436 Male, age 74, both hemispheres 45.3
1891 Female, age 85, both hemispheres 45.0
2137 Male, age 80, left hemisphere 43.5
Parahippocampal cortex
nTPM: 48.7
2245 Female, age 91, both hemispheres 54.5
2018 Male, age 76, both hemispheres 54.2
2532 Female, age 72, left hemisphere 51.8
2250 Female, age 67, right hemisphere 49.8
2622 Female, age 67, right hemisphere 49.5
2693 Female, age 94, both hemispheres 47.2
1850 Male, age 80, both hemispheres 46.6
1990 Female, age 91, right hemisphere 45.9
1933 Female, age 85, both hemispheres 45.7
2692 Male, age 74, both hemispheres 42.1
Perirhinal gyrus
nTPM: 47.0
1847 Female, age 91, left hemisphere 49.8
2521 Female, age 94, right hemisphere 49.0
2848 Male, age 76, right hemisphere 48.4
1794 Male, age 80, right hemisphere 45.6
1841 Female, age 85, right hemisphere 42.3
Subiculum
nTPM: 50.2
2042 Male, age 76, both hemispheres 56.4
2729 Female, age 91, right hemisphere 52.0
2438 Female, age 94, left hemisphere 49.8
2619 Male, age 74, both hemispheres 49.7
1901 Male, age 80, both hemispheres 47.1
1977 Female, age 85, both hemispheres 46.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 33.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.6
Samples: 197

Max nTPM: 62.4
Min nTPM: 18.1
Std nTPM: 7.3
Median nTPM: 32.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 62.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 56.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 55.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 53.7
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 53.4
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 49.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 49.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 49.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 48.7
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 48.3
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 47.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.4
FF:10153-102I9 76 years, female 32.0
FF:10169-103B7 60 years, female 20.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 19.6
Pig sample Sample description nTPM
Subiculum
nTPM: 17.5
Samples: 4

Max nTPM: 20.7
Min nTPM: 14.5
Sample A Female 20.7
Sample B Female 17.3
Sample C Male 17.4
Sample D Male 14.5
Dorsal hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 22.4
Min nTPM: 15.2
Sample A Female 22.4
Sample B Female 19.9
Sample C Male 19.9
Sample D Male 15.2
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 17.4
Min nTPM: 13.2
Sample A Female 17.4
Sample B Female 15.1
Sample C Male 17.4
Sample D Male 13.2
Ventral hippocampus
nTPM: 19.6
Samples: 4

Max nTPM: 25.2
Min nTPM: 15.3
Sample A Female 19.0
Sample B Female 15.3
Sample C Male 25.2
Sample D Male 19.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 53.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.3
Samples: 4

Max nTPM: 59.0
Min nTPM: 49.9
Sample A Male 53.1
Sample B Male 49.9
Sample C Female 51.0
Sample D Female 59.0
Hippocampal formation
nTPM: 53.5
Samples: 4

Max nTPM: 58.6
Min nTPM: 45.6
Sample A Male 45.6
Sample B Male 52.5
Sample C Female 58.6
Sample D Female 57.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
70429483 Antisense, RP_050614_01_G07, Mouse strain C57BL/6J (56 days, male) 9.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org