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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NIPSNAP3A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
48.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
35.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
33.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
30.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
30.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
27.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
24.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
24.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
21.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
21.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
21.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
19.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
19.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
17.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
17.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
15.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
15.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
15.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
15.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
14.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
14.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
13.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
13.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
13.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
12.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
12.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
11.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
11.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
11.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
11.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
10.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
10.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
10.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
9.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
9.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
9.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
9.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
9.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
8.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
7.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NIPSNAP3A is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
87.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
69.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
49.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
47.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
46.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
44.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
43.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
43.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
42.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
42.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
42.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
42.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
41.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
39.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
39.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
39.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
38.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
36.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
36.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
36.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
35.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
35.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
35.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
35.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
35.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
34.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
34.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
34.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
33.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
33.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
32.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
32.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
32.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
32.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
32.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
32.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
31.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
31.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
31.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
31.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
30.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
30.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
30.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
30.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
30.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
30.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
30.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
30.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
30.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
29.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
29.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
29.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
29.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
29.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
29.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
29.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
29.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
29.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
29.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
29.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
29.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
28.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
28.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
28.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
28.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
28.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
28.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
28.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
28.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
28.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
28.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
28.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
28.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
28.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
28.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
28.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
28.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
27.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
27.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
27.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
27.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
27.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
27.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
27.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
27.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
27.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
27.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
26.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
26.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
26.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
26.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
26.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
26.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
26.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
26.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
26.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
26.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
26.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
26.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
26.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
25.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
25.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
25.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
25.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
25.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
25.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
25.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
25.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
25.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
25.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
25.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
25.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
25.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
25.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
25.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
25.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
25.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
25.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
24.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
24.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
24.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
24.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
24.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
24.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
24.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
24.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
24.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
24.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
24.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
24.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
24.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
24.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
24.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
24.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
24.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
24.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
24.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
24.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
24.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
23.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
23.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
23.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
23.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
23.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
23.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
23.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
23.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
23.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
23.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
23.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
23.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
23.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
23.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
23.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
22.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
22.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
22.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
22.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
22.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
22.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
22.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
22.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
22.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
22.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
22.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
22.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
22.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
22.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
22.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
22.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
22.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
22.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
22.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
22.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
21.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
21.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
21.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
21.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
21.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
21.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
21.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
21.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
21.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
21.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
21.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
21.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
21.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
21.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
21.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
21.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
21.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
21.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
20.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
20.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
20.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
20.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
20.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
20.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
20.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
20.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
20.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
20.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
20.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
20.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
20.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
20.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
20.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
20.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
20.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
20.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
20.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
19.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
19.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
19.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
19.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
19.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
19.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
19.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
19.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
19.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
19.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
19.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
19.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
19.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
19.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
19.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
19.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
19.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
19.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
19.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
19.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
19.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
18.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
18.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
18.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
18.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
18.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
18.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
18.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
18.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
18.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
18.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
18.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
18.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
18.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
18.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
18.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
18.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
18.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
18.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
18.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
18.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
18.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
18.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
18.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
18.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
18.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
18.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
18.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
18.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
18.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
18.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
17.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
17.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
17.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
17.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
17.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
17.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
17.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
17.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
17.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
17.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
17.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
17.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
17.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
17.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
17.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
17.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
16.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
16.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
16.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
16.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
16.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
16.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
16.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
16.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
16.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
16.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
16.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
16.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
16.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
16.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
16.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
16.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
16.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
16.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
16.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
16.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
16.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
16.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
16.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
16.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
16.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
15.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
15.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
15.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
15.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
15.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
15.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
15.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
15.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
15.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
15.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
15.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
15.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
15.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
15.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
14.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
14.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
14.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
14.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
14.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
14.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
14.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
14.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
14.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
14.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
14.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
14.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
14.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
14.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
13.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
13.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
13.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
13.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
13.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
13.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
13.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
12.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
12.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
12.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
12.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
12.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
11.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
11.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
11.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
11.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
11.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
10.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
10.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
10.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
10.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
9.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
9.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
6.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
5.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
4.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NIPSNAP3A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
38.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
36.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
35.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
34.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
33.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
30.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
30.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
30.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
30.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
30.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
29.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
29.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
29.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
28.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
27.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
27.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
27.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
27.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
26.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
26.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
26.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
25.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
25.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
24.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
24.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
24.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
24.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
24.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
24.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
24.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
23.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
22.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
22.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
22.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
21.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
21.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
21.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
21.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
20.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
20.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
20.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
20.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
20.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
20.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
19.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
19.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
19.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
19.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
19.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
19.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
19.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
18.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
17.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
17.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
17.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
16.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
16.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
16.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
14.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
14.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
14.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
14.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
14.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
13.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
13.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
12.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
12.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
12.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
11.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
10.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
8.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
8.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
8.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
8.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
5.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
3.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NIPSNAP3A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
55.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
52.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
44.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
40.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
38.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
36.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
36.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
36.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
35.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
35.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
35.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
34.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
34.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
33.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
32.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
32.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
32.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
31.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
31.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
31.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
31.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
31.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
30.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
30.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
30.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
30.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
30.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
29.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
29.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
29.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
29.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
29.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
29.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
29.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
29.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
29.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
29.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
29.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
28.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
28.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
28.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
28.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
28.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
27.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
27.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
27.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
27.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
27.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
27.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
26.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
26.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
26.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
25.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
25.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
25.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
25.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
25.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
25.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
25.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
25.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
24.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
24.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
24.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
24.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
24.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
24.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
24.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
24.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
24.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
23.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
23.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
23.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
23.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
23.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
23.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
23.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
23.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
22.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
22.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
22.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
22.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
22.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
22.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
22.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
22.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
22.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
22.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
21.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
21.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
21.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
21.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
21.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
21.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
20.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
20.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
20.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
19.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
19.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
19.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
19.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
19.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
19.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
19.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
18.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
18.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
18.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
18.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
18.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
18.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
18.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
18.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
18.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
18.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
18.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
18.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
18.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
17.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
17.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
17.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
17.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
17.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
17.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
16.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
16.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
16.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
16.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
16.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
16.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
16.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
16.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
16.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
16.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
16.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
16.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
15.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
15.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
15.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
15.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
15.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
15.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
15.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
15.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
15.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
15.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
15.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
15.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
15.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
14.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
14.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
14.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
14.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
14.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
14.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
14.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
13.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
13.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
13.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
13.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
13.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
13.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
13.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
13.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
12.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
12.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
12.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
12.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
11.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
11.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
11.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
11.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
11.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
11.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
11.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
11.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
10.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
10.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
10.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
10.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
10.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
10.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
10.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
10.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
8.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
8.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
7.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
7.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
6.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
6.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
6.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
6.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
5.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
5.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
5.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
5.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
5.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
4.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
3.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
2.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012670003
Tumor
1.5
CPT0009080003
Normal
1.4
CPT0077110003
Tumor
1.0
CPT0009060003
Tumor
1.0
CPT0009020003
Normal
0.9
CPT0088970003
Tumor
0.9
CPT0087040003
Tumor
0.8
CPT0018250001
Normal
0.7
CPT0025610001
Normal
0.6
CPT0015730003
Tumor
0.6
CPT0075170001
Normal
0.6
CPT0065750003
Tumor
0.6
CPT0017450001
Normal
0.5
CPT0020130001
Normal
0.5
CPT0069010001
Normal
0.5
CPT0001550001
Normal
0.5
CPT0092290003
Tumor
0.4
CPT0088500001
Normal
0.4
CPT0086890003
Normal
0.4
CPT0012290003
Normal
0.4
CPT0012770003
Normal
0.4
CPT0020020001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0012640003
Normal
0.4
CPT0002270011
Tumor
0.4
CPT0077140001
Normal
0.4
CPT0012280003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0092790003
Tumor
0.3
CPT0081620001
Normal
0.3
CPT0078800003
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0024680001
Normal
0.3
CPT0078670001
Normal
0.3
CPT0088710001
Normal
0.3
CPT0012920003
Normal
0.3
CPT0001510001
Normal
0.3
CPT0077500001
Normal
0.3
CPT0078660003
Tumor
0.2
CPT0012570003
Normal
0.2
CPT0087050003
Normal
0.2
CPT0013790003
Normal
0.2
CPT0065810003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0079180003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0088640003
Normal
0.1
CPT0065450001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0007470001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0017410003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0086370003
Normal
0.0
CPT0025060001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0001190001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0069160003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0014130001
Normal
-0.2
CPT0078830003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0088550004
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0023350003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0071150004
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0086360003
Tumor
-0.3
CPT0012550003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0077310003
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0006900003
Tumor
-0.4
CPT0076330003
Tumor
-0.4
CPT0066520001
Normal
-0.4
CPT0065430003
Tumor
-0.4
CPT0021240003
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0026410003
Tumor
-0.4
CPT0065870003
Tumor
-0.4
CPT0078990003
Tumor
-0.4
CPT0010120001
Normal
-0.5
CPT0019990003
Tumor
-0.5
CPT0079270003
Tumor
-0.5
CPT0088900003
Tumor
-0.5
CPT0000870016
Tumor
-0.5
CPT0023690003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0092190003
Normal
-0.5
CPT0012180003
Tumor
-0.5
CPT0025110003
Tumor
-0.5
CPT0012080003
Tumor
-0.5
CPT0010110003
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0078930003
Tumor
-0.5
CPT0001220008
Tumor
-0.5
CPT0077320001
Normal
-0.6
CPT0084560003
Tumor
-0.6
CPT0017850003
Tumor
-0.6
CPT0069000003
Tumor
-0.6
CPT0025050003
Tumor
-0.6
CPT0019130003
Tumor
-0.6
CPT0084590001
Normal
-0.6
CPT0086820003
Tumor
-0.6
CPT0088480003
Tumor
-0.6
CPT0007320003
Tumor
-0.6
CPT0015810003
Tumor
-0.7
CPT0025350003
Tumor
-0.7
CPT0085670003
Tumor
-0.7
CPT0079230003
Tumor
-0.7
CPT0081990003
Tumor
-0.7
CPT0000640003
Tumor
-0.7
CPT0077490003
Tumor
-0.7
CPT0014370004
Tumor
-0.7
CPT0025880003
Tumor
-0.7
CPT0014450004
Tumor
-0.7
CPT0001180009
Tumor
-0.8
CPT0025230003
Tumor
-0.8
CPT0011410003
Tumor
-0.8
CPT0081600003
Tumor
-0.8
CPT0079380003
Tumor
-0.8
CPT0063630003
Tumor
-0.9
CPT0075720003
Tumor
-1.0
CPT0086950003
Tumor
-1.0
CPT0002350011
Tumor
-1.0
CPT0001340003
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
