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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UGGT1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
40.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
38.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
33.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
29.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
21.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
20.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
17.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
14.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
14.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
13.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
13.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
11.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
11.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
10.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
10.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
10.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
9.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
9.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
9.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
8.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
8.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
8.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
8.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
8.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
8.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
7.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
7.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
7.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
6.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
6.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
6.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
5.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
5.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
5.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
5.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UGGT1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
34.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
32.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
31.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
29.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
28.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
27.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
27.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
27.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
26.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
26.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
26.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
26.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
25.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
25.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
24.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
24.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
23.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
23.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
23.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
22.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
22.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
22.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
22.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
22.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
22.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
21.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
21.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
21.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
21.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
21.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
21.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
21.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
21.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
21.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
21.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
21.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
21.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
20.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
20.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
20.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
20.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
20.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
20.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
20.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
20.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
20.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
19.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
19.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
19.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
19.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
19.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
19.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
19.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
19.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
19.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
19.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
19.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
19.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
18.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
18.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
18.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
18.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
18.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
18.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
18.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
18.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
18.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
18.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
18.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
18.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
18.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
18.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
18.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
18.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
18.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
18.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
17.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
17.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
17.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
17.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
17.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
17.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
17.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
17.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
17.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
17.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
17.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
17.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
17.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
17.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
17.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
17.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
17.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
17.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
17.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
17.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
17.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
16.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
16.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
16.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
16.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
16.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
16.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
16.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
16.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
16.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
16.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
16.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
16.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
16.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
16.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
16.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
16.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
16.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
16.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
15.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
15.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
15.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
15.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
15.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
15.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
15.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
15.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
15.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
15.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
15.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
15.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
15.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
15.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
15.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
15.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
15.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
15.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
15.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
15.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
15.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
15.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
15.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
15.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
15.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
15.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
15.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
14.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
14.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
14.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
14.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
14.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
14.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
14.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
14.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
14.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
14.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
14.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
14.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
14.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
14.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
14.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
14.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
14.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
14.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
14.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
14.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
14.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
14.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
14.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
14.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
14.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
14.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
14.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
13.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
13.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
13.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
13.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
13.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
13.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
13.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
13.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
13.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
13.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
13.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
13.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
13.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
13.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
13.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
13.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
13.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
13.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
13.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
13.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
13.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
13.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
13.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
13.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
13.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
12.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
12.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
12.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
12.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
12.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
12.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
12.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
12.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
12.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
12.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
12.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
12.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
12.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
12.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
12.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
12.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
11.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
11.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
11.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
11.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
11.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
11.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
11.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
11.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
11.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
11.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
11.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
11.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
11.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
11.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
11.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
11.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
11.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
11.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
11.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
11.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
10.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
10.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
10.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
10.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
10.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
10.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
10.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
10.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
10.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
10.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
10.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
10.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
10.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
9.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
9.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
9.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
9.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
9.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
9.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
9.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
9.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
9.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
9.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
9.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
9.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
9.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
9.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
9.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
9.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
9.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
8.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
8.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
8.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
8.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
8.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
8.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
8.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
8.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
8.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
8.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
8.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
8.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
8.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
8.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
8.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
8.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
7.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
7.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
7.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
6.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
6.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
6.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
6.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
6.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
5.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
5.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
5.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
5.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
5.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
5.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
4.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
4.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
4.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
4.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
4.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
2.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UGGT1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
44.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
27.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
27.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
25.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
24.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
24.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
24.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
23.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
23.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
22.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
21.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
21.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
20.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
20.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
20.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
19.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
19.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
19.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
18.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
18.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
18.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
17.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
16.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
16.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
15.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
15.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
15.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
15.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
15.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
14.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
14.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
14.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
14.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
14.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
13.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
13.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
13.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
13.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
13.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
13.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
13.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
12.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
12.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
12.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
12.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
12.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
12.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
12.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
12.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
11.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
11.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
11.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
11.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
11.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
11.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
10.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
10.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
9.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
9.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
9.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
8.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
8.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
7.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UGGT1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
39.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
36.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
36.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
33.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
29.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
29.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
29.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
28.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
28.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
28.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
26.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
24.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
24.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
24.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
24.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
23.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
23.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
23.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
23.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
23.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
22.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
22.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
22.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
21.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
21.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
20.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
20.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
20.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
20.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
20.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
20.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
19.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
19.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
19.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
18.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
18.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
18.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
18.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
18.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
18.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
18.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
18.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
18.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
17.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
17.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
17.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
17.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
17.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
17.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
17.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
16.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
16.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
16.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
16.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
16.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
16.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
15.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
15.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
15.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
15.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
15.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
15.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
15.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
14.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
14.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
14.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
14.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
14.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
14.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
14.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
14.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
14.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
14.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
14.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
13.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
13.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
13.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
13.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
13.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
13.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
13.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
13.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
13.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
12.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
12.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
12.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
12.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
12.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
12.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
12.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
12.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
12.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
12.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
12.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
12.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
12.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
11.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
11.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
11.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
11.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
11.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
11.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
11.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
11.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
11.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
11.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
11.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
11.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
11.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
10.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
10.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
10.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
10.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
10.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
10.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
10.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
10.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
10.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
10.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
10.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
10.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
10.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
9.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
9.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
9.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
9.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
9.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
9.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
9.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
9.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
8.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
8.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
8.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
8.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
8.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
8.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
8.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
8.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
8.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
8.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
8.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
8.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
8.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
8.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
8.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
8.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
8.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
8.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
8.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
8.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
8.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
7.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
7.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
7.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
7.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
7.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
7.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
7.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
7.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
7.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
7.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
7.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
6.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
6.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
6.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
6.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
6.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
5.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
5.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
5.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
5.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
5.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
5.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
4.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
4.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
4.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
4.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
3.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0025110003
Tumor
1.4
CPT0002350011
Tumor
1.2
CPT0079270003
Tumor
1.1
CPT0012180003
Tumor
1.0
CPT0001340003
Tumor
1.0
CPT0088550004
Tumor
1.0
CPT0076330003
Tumor
0.8
CPT0015730003
Tumor
0.7
CPT0081880003
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0023350003
Tumor
0.7
CPT0086950003
Tumor
0.6
CPT0078800003
Tumor
0.6
CPT0069160003
Tumor
0.5
CPT0078830003
Tumor
0.5
CPT0012550003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0079380003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0014450004
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0089460004
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0089020003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0000890001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0014130001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0001540009
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0017410003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0081620001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0000870016
Tumor
-0.2
CPT0020020001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0011240003
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0025920001
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0000780007
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0077490003
Tumor
-0.3
CPT0001550001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0019160001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0009080003
Normal
-0.4
CPT0012920003
Normal
-0.4
CPT0009020003
Normal
-0.5
CPT0078660003
Tumor
-0.7
CPT0079180003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
