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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RTP4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
34.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
34.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
30.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
23.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
23.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
22.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
20.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
19.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
18.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
18.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
17.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
17.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
17.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
16.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
15.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
15.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
15.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
15.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
11.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
11.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
9.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
6.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
6.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
5.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
5.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
4.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
3.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
3.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
3.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
3.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
2.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
2.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
2.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
1.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
1.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
1.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RTP4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
75.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
64.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
57.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
57.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
54.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
52.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
50.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
50.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
49.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
49.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
49.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
43.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
42.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
42.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
40.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
40.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
39.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
38.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
38.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
37.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
36.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
36.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
35.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
35.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
35.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
35.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
35.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
34.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
34.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
34.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
33.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
32.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
32.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
31.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
31.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
31.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
31.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
30.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
30.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
29.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
29.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
28.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
28.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
28.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
28.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
28.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
27.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
27.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
27.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
27.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
27.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
27.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
27.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
27.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
27.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
26.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
26.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
26.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
26.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
26.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
26.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
26.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
25.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
25.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
25.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
25.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
25.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
25.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
25.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
25.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
24.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
24.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
24.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
24.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
24.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
24.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
24.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
24.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
24.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
23.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
23.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
23.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
23.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
23.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
23.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
23.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
23.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
23.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
23.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
23.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
23.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
23.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
23.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
23.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
22.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
22.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
22.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
22.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
22.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
22.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
22.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
21.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
21.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
21.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
21.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
21.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
21.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
21.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
21.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
20.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
20.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
20.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
20.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
20.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
20.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
19.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
19.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
19.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
19.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
19.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
19.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
19.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
19.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
18.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
18.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
18.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
18.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
18.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
18.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
17.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
17.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
17.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
17.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
17.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
17.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
17.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
17.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
17.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
17.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
17.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
17.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
16.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
16.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
16.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
16.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
15.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
15.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
15.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
15.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
15.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
15.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
15.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
15.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
15.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
15.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
15.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
15.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
15.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
14.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
14.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
14.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
14.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
14.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
14.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
14.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
14.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
13.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
13.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
13.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
13.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
13.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
13.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
13.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
13.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
13.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
13.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
13.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
12.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
12.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
12.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
12.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
12.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
12.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
12.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
12.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
12.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
12.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
12.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
12.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
12.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
11.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
11.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
11.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
11.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
11.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
11.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
11.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
11.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
11.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
11.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
11.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
11.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
11.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
11.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
11.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
11.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
11.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
10.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
10.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
10.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
10.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
10.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
10.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
10.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
10.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
10.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
10.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
10.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
9.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
9.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
9.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
9.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
9.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
9.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
9.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
9.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
9.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
9.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
9.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
9.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
8.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
8.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
8.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
8.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
8.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
8.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
8.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
8.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
8.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
8.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
8.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
8.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
8.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
8.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
8.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
8.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
8.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
8.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
7.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
7.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
7.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
7.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
7.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
7.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
7.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
7.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
7.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
7.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
7.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
7.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
7.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
7.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
7.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
7.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
7.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
7.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
6.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
6.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
6.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
6.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
6.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
6.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
6.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
6.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
6.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
6.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
6.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
6.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
6.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
6.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
6.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
6.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
6.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
5.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
5.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
5.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
5.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
5.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
5.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
5.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
5.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
5.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
5.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
5.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
5.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
5.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
5.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
5.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
5.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
5.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
5.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
5.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
5.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
4.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
4.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
4.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
4.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
4.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
4.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
4.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
4.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
4.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
4.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
4.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
4.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
4.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
4.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
3.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
3.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
3.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
3.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
3.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
3.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
3.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
3.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
3.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
3.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
3.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
3.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
3.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
3.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
3.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
3.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
3.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
3.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
3.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
2.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
2.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
2.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
2.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
2.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
2.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
2.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
2.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
2.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
2.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
2.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
2.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
2.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
2.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
2.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
2.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
2.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
1.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
1.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
1.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
1.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
1.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RTP4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
81.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
62.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
60.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
49.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
47.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
45.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
39.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
38.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
37.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
36.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
35.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
34.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
33.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
31.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
30.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
30.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
29.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
29.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
28.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
28.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
27.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
26.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
25.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
23.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
23.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
23.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
23.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
23.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
22.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
22.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
20.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
20.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
18.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
18.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
18.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
18.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
17.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
16.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
16.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
16.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
15.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
15.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
13.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
13.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
13.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
12.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
12.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
12.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
11.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
11.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
11.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
10.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
10.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
9.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
9.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
9.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
8.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
8.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
8.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
7.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
7.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
7.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
7.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
7.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
6.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
6.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
6.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
6.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
6.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
5.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
5.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
5.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
5.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
5.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
4.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
4.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
4.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
4.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
4.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
4.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
3.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
3.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
3.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
2.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
1.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RTP4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
47.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
44.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
41.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
35.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
33.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
33.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
32.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
31.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
30.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
30.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
29.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
29.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
28.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
27.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
26.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
25.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
24.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
24.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
24.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
23.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
23.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
23.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
23.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
22.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
22.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
22.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
22.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
21.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
21.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
20.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
20.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
19.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
19.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
19.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
19.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
19.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
18.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
18.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
17.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
17.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
17.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
16.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
16.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
16.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
16.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
15.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
15.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
15.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
14.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
14.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
14.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
13.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
13.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
13.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
13.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
13.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
13.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
13.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
12.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
12.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
12.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
12.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
11.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
11.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
10.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
10.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
10.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
10.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
10.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
10.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
10.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
10.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
10.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
9.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
9.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
9.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
9.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
9.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
9.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
9.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
9.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
9.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
9.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
9.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
8.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
8.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
8.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
8.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
8.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
8.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
8.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
8.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
8.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
8.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
8.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
8.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
7.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
7.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
7.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
7.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
7.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
7.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
7.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
7.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
7.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
7.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
7.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
6.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
6.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
6.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
6.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
6.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
6.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
6.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
5.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
5.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
5.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
5.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
5.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
5.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
5.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
5.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
5.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
5.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
5.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
5.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
5.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
5.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
4.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
4.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
4.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
4.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
4.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
4.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
4.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
4.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
4.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
4.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
4.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
4.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
3.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
3.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
3.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
3.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
3.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
3.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
3.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
3.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
3.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
3.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
3.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
3.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
2.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
2.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
2.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
2.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
2.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
2.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
2.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
2.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
2.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
2.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
2.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
2.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
2.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
2.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
2.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
2.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
1.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
1.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
1.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
1.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
1.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
1.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
1.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
1.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
1.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
0.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
0.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
0.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
0.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0089020003
Tumor
1.3
CPT0012550003
Tumor
0.7
CPT0001180009
Tumor
0.6
CPT0079510001
Normal
0.6
CPT0089040001
Normal
0.4
CPT0015910003
Tumor
0.4
CPT0081990003
Tumor
0.4
CPT0063320003
Tumor
0.3
CPT0078530001
Normal
0.3
CPT0079270003
Tumor
0.3
CPT0014350001
Normal
0.2
CPT0086870003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0079180003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0088500001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0079000001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0078990003
Tumor
-0.2
CPT0082010001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0000870016
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0063330001
Normal
-0.5
CPT0014450004
Tumor
-0.5
CPT0014370004
Tumor
-0.6
CPT0078510003
Tumor
-0.6
CPT0088550004
Tumor
-0.7
CPT0011240003
Tumor
-0.9
CPT0019130003
Tumor
-0.9
CPT0079300001
Normal
-1.0
CPT0024680001
Normal
-1.1
CPT0012370003
Tumor
-1.1
CPT0014470001
Normal
-1.2
CPT0088920001
Normal
-1.3
CPT0088570001
Normal
-1.3
CPT0013790003
Normal
-1.6
CPT0012770003
Normal
-1.6
CPT0012570003
Normal
-1.7
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0081620001
Normal
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
