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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LIMD2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
53.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
23.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
17.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
15.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
14.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
13.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
13.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
13.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
12.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
9.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
9.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
8.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
8.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
6.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
6.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
5.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
5.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
5.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
4.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
4.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
4.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
4.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
3.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
2.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
2.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
1.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
1.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
1.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
1.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LIMD2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
91.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
88.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
81.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
80.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
76.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
75.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
70.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
69.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
67.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
65.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
64.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
63.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
61.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
61.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
60.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
58.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
57.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
56.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
55.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
54.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
53.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
53.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
51.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
50.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
50.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
49.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
48.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
48.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
48.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
48.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
47.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
47.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
47.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
46.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
46.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
45.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
45.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
44.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
44.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
44.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
44.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
43.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
43.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
43.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
43.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
42.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
41.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
40.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
40.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
40.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
39.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
39.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
39.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
38.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
38.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
38.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
38.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
37.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
37.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
37.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
37.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
36.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
36.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
36.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
35.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
35.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
35.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
34.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
34.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
34.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
34.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
34.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
34.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
33.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
33.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
33.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
33.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
33.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
33.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
32.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
32.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
31.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
31.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
31.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
31.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
31.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
31.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
31.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
30.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
30.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
30.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
30.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
30.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
30.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
29.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
29.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
29.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
29.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
29.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
29.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
29.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
29.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
28.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
28.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
28.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
28.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
27.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
27.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
27.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
27.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
27.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
27.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
27.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
27.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
27.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
27.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
26.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
26.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
26.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
26.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
26.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
25.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
25.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
25.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
25.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
25.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
25.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
25.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
25.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
25.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
25.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
25.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
25.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
25.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
24.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
24.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
24.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
24.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
24.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
24.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
24.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
24.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
23.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
23.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
23.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
23.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
23.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
23.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
23.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
23.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
23.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
23.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
23.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
23.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
23.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
22.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
22.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
22.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
22.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
22.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
22.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
22.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
22.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
22.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
22.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
22.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
22.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
22.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
22.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
22.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
21.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
21.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
21.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
21.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
21.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
21.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
21.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
21.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
21.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
21.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
21.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
21.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
21.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
21.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
21.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
21.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
21.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
21.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
21.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
21.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
20.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
20.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
20.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
20.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
20.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
20.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
19.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
19.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
19.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
19.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
19.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
19.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
19.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
19.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
19.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
19.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
19.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
19.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
19.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
19.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
19.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
19.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
19.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
19.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
18.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
18.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
18.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
18.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
18.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
18.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
18.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
18.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
18.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
18.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
18.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
18.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
17.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
17.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
17.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
17.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
17.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
17.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
17.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
17.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
17.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
17.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
17.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
17.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
17.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
17.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
17.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
16.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
16.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
16.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
16.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
16.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
16.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
16.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
16.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
16.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
16.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
16.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
16.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
16.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
16.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
16.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
16.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
16.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
16.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
15.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
15.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
15.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
15.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
15.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
15.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
15.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
15.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
15.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
15.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
15.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
15.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
15.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
15.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
15.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
15.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
15.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
15.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
14.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
14.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
14.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
14.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
14.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
14.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
14.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
14.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
14.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
14.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
14.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
14.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
14.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
13.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
13.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
13.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
13.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
13.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
13.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
13.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
13.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
13.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
13.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
13.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
13.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
13.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
13.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
13.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
12.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
12.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
12.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
12.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
12.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
12.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
12.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
12.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
12.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
12.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
12.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
12.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
11.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
11.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
11.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
11.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
11.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
11.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
11.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
10.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
10.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
10.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
10.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
10.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
10.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
10.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
10.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
10.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
10.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
10.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
9.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
9.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
9.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
9.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
9.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
9.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
9.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
9.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
9.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
8.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
8.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
8.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
8.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
8.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
8.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
8.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
8.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
8.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
8.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
8.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
8.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
8.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
8.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
8.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
8.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
8.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
7.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
7.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
7.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
7.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
7.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
7.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
7.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
7.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
6.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
6.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
6.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
6.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
6.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
6.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
5.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
5.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
5.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
5.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
5.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
4.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
4.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
4.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
3.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
3.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
2.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
2.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
1.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LIMD2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
76.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
65.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
65.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
54.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
52.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
50.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
46.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
42.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
41.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
41.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
40.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
39.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
37.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
37.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
35.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
35.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
34.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
34.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
34.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
34.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
32.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
31.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
31.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
31.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
29.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
29.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
29.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
28.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
27.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
26.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
25.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
25.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
24.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
24.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
24.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
22.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
22.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
21.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
20.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
19.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
19.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
18.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
17.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
17.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
17.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
16.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
16.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
14.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
14.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
14.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
13.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
13.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
12.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
11.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
11.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
11.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
10.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
10.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
10.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
10.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
9.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
9.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
8.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
8.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
8.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
7.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
6.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
6.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
6.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
6.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
6.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
6.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
6.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
5.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
5.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
4.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
4.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
3.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
3.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
2.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LIMD2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
130.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
106.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
95.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
80.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
79.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
68.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
65.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
63.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
63.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
59.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
58.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
51.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
49.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
47.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
37.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
37.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
36.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
35.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
35.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
35.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
34.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
34.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
34.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
34.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
33.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
33.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
32.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
30.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
29.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
28.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
28.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
28.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
28.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
27.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
27.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
26.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
26.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
26.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
25.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
25.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
25.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
25.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
25.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
24.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
24.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
24.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
24.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
23.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
23.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
23.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
23.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
23.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
23.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
22.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
22.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
22.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
22.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
21.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
20.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
20.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
20.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
20.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
20.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
19.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
19.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
19.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
19.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
19.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
19.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
19.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
19.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
18.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
17.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
17.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
17.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
17.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
17.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
17.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
16.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
16.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
16.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
16.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
16.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
16.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
16.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
15.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
15.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
15.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
15.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
15.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
14.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
14.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
14.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
14.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
14.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
14.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
13.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
13.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
13.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
13.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
13.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
13.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
12.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
12.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
12.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
12.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
11.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
11.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
11.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
11.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
11.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
11.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
11.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
11.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
11.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
10.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
10.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
10.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
10.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
10.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
10.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
10.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
10.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
10.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
10.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
10.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
10.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
10.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
9.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
9.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
9.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
9.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
9.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
9.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
9.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
8.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
8.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
8.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
8.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
8.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
8.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
8.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
8.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
7.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
7.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
7.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
7.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
7.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
7.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
7.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
7.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
7.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
7.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
6.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
6.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
6.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
6.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
6.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
6.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
6.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
6.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
6.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
6.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
6.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
6.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
6.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
6.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
6.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
6.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
6.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
5.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
5.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
5.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
5.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
5.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
5.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
4.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
4.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
4.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
4.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
4.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
4.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
4.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
4.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
4.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
3.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
3.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
3.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
3.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
3.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
3.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
3.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
3.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
2.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
2.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
2.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
2.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
2.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
2.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
2.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
2.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
2.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
1.5
CPT0078990003
Tumor
1.0
CPT0079180003
Tumor
1.0
CPT0079380003
Tumor
0.9
CPT0012180003
Tumor
0.9
CPT0088550004
Tumor
0.8
CPT0001540009
Tumor
0.7
CPT0079510001
Normal
0.6
CPT0017410003
Tumor
0.6
CPT0077320001
Normal
0.5
CPT0009060003
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0001270001
Normal
0.5
CPT0011240003
Tumor
0.5
CPT0026410003
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0017850003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0000640003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0014470001
Normal
0.4
CPT0075170001
Normal
0.4
CPT0092190003
Normal
0.4
CPT0015910003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0014370004
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0088570001
Normal
0.2
CPT0006900003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0025170003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0012290003
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0001220008
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0079230003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0086030003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0014160003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0012920003
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0092790003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0021240003
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0012900004
Tumor
-0.2
CPT0025060001
Normal
-0.2
CPT0015810003
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0001230001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0009000003
Tumor
-0.3
CPT0011410003
Tumor
-0.3
CPT0092740003
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0002270011
Tumor
-0.3
CPT0078670001
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0014450004
Tumor
-0.4
CPT0020020001
Normal
-0.4
CPT0065750003
Tumor
-0.4
CPT0020130001
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0012570003
Normal
-0.4
CPT0065930003
Tumor
-0.5
CPT0009080003
Normal
-0.5
CPT0001340003
Tumor
-0.5
CPT0088970003
Tumor
-0.5
CPT0076350001
Normal
-0.5
CPT0079430001
Normal
-0.5
CPT0075130003
Tumor
-0.5
CPT0007870001
Normal
-0.5
CPT0012770003
Normal
-0.5
CPT0066430001
Normal
-0.5
CPT0078800003
Tumor
-0.5
CPT0087050003
Normal
-0.5
CPT0026420001
Normal
-0.6
CPT0077140001
Normal
-0.6
CPT0086950003
Tumor
-1.0
CPT0078510003
Tumor
-2.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
