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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CIDEB is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
29.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
17.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
15.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
9.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
5.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
4.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
4.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
3.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
3.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
3.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
2.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
2.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
2.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
1.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
1.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
1.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
1.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CIDEB is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
68.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
61.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
60.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
56.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
56.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
56.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
55.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
55.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
50.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
50.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
50.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
47.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
46.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
46.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
46.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
45.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
45.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
45.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
44.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
43.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
43.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
42.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
42.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
42.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
42.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
41.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
40.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
40.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
40.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
39.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
39.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
39.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
38.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
38.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
38.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
38.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
37.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
37.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
37.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
36.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
36.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
36.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
36.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
36.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
36.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
35.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
35.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
35.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
35.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
34.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
34.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
34.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
34.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
34.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
34.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
33.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
33.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
33.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
33.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
33.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
33.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
33.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
33.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
33.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
32.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
32.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
32.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
32.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
32.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
32.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
32.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
32.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
32.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
32.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
31.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
31.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
31.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
31.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
30.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
30.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
30.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
30.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
30.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
30.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
29.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
29.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
29.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
29.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
29.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
29.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
29.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
29.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
28.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
28.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
28.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
28.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
28.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
27.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
27.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
27.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
27.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
27.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
27.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
27.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
27.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
27.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
26.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
26.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
26.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
26.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
26.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
26.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
26.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
25.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
25.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
25.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
25.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
25.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
25.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
25.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
25.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
25.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
25.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
24.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
24.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
24.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
24.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
24.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
24.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
24.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
24.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
24.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
24.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
23.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
23.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
23.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
23.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
23.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
23.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
23.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
23.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
23.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
23.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
23.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
22.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
22.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
22.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
22.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
22.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
22.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
22.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
22.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
22.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
22.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
22.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
21.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
21.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
21.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
21.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
21.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
21.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
21.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
21.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
21.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
21.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
21.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
21.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
21.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
21.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
21.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
20.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
20.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
20.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
20.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
20.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
20.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
20.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
20.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
20.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
20.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
20.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
20.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
20.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
20.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
20.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
20.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
19.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
19.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
19.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
19.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
19.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
19.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
19.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
19.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
19.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
19.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
19.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
19.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
19.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
19.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
18.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
18.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
18.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
18.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
18.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
18.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
18.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
18.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
18.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
18.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
18.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
18.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
18.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
17.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
17.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
17.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
17.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
17.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
17.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
17.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
17.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
17.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
17.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
17.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
16.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
16.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
16.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
16.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
16.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
16.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
16.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
16.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
16.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
16.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
16.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
16.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
15.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
15.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
15.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
15.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
15.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
15.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
15.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
15.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
15.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
15.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
15.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
15.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
15.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
15.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
15.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
15.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
15.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
15.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
15.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
15.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
15.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
15.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
15.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
14.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
14.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
14.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
14.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
14.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
14.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
14.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
14.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
14.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
14.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
14.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
14.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
13.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
13.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
13.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
13.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
13.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
13.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
13.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
12.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
12.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
12.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
12.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
12.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
12.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
12.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
12.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
12.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
12.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
12.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
12.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
12.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
12.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
11.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
11.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
11.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
11.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
11.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
11.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
11.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
11.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
11.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
10.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
10.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
10.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
10.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
10.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
10.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
10.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
10.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
10.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
10.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
10.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
10.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
9.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
9.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
9.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
9.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
9.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
9.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
9.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
9.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
9.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
8.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
8.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
8.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
8.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
8.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
8.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
8.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
8.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
8.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
8.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
7.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
7.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
6.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
6.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
6.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
6.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
6.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
6.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
6.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
6.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
6.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
5.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
5.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
5.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
5.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
5.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
4.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
4.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
4.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
4.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
4.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
4.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
4.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
3.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
3.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
3.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
3.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
3.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
3.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
3.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
3.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
3.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
2.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
2.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
2.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
2.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
2.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
2.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
2.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
2.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
2.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
1.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
1.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
1.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
1.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
1.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
0.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CIDEB is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
51.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
44.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
43.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
36.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
36.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
36.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
35.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
29.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
29.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
29.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
28.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
27.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
27.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
27.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
26.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
26.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
26.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
25.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
25.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
24.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
24.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
24.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
23.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
23.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
23.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
22.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
22.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
22.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
20.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
20.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
20.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
20.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
19.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
19.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
18.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
18.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
18.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
17.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
17.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
17.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
16.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
16.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
16.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
16.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
16.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
16.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
15.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
15.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
15.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
14.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
14.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
14.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
12.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
12.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
11.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
11.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
11.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
11.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
11.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
11.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
11.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
11.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
10.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
10.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
10.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
10.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
10.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
9.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
9.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
8.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
8.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
7.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
7.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
7.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
7.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
6.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
6.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
5.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
5.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
4.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
4.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
3.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CIDEB is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
68.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
49.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
40.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
37.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
37.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
37.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
35.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
35.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
31.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
28.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
26.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
26.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
25.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
25.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
25.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
25.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
24.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
24.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
24.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
24.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
23.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
23.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
23.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
23.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
23.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
23.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
23.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
22.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
21.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
20.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
20.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
20.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
20.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
20.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
19.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
19.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
18.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
18.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
18.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
18.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
18.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
17.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
17.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
16.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
16.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
16.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
16.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
16.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
16.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
16.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
16.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
15.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
15.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
15.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
15.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
15.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
15.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
15.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
15.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
15.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
15.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
14.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
14.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
14.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
14.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
14.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
13.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
13.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
13.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
13.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
13.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
12.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
12.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
12.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
11.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
11.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
11.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
11.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
11.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
11.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
11.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
11.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
11.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
11.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
10.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
10.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
10.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
10.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
10.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
10.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
10.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
9.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
9.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
9.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
9.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
9.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
9.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
9.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
9.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
9.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
9.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
9.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
9.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
9.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
8.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
8.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
8.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
8.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
8.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
8.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
8.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
8.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
8.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
8.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
8.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
8.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
7.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
7.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
7.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
7.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
7.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
7.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
7.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
7.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
7.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
6.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
6.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
6.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
6.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
6.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
6.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
6.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
6.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
6.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
6.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
6.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
6.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
6.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
6.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
6.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
6.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
5.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
5.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
5.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
5.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
5.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
5.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
5.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
5.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
5.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
5.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
4.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
4.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
4.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
4.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
4.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
4.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
4.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
4.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
4.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
4.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
4.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
4.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
4.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
3.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
3.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
3.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
3.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
3.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
3.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
2.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
2.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
2.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
2.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
2.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
2.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
2.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
2.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
2.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
2.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
2.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
2.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
2.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
2.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
2.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
2.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
2.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
1.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
1.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
1.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
1.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
1.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
1.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
1.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
1.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
1.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
0.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
0.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
0.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
0.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0006630003
Tumor
1.4
CPT0078830003
Tumor
1.4
CPT0086820003
Tumor
1.4
CPT0019130003
Tumor
1.3
CPT0001540009
Tumor
1.1
CPT0078930003
Tumor
1.1
CPT0065810003
Tumor
1.0
CPT0015730003
Tumor
1.0
CPT0078990003
Tumor
0.9
CPT0071150004
Tumor
0.8
CPT0025880003
Tumor
0.8
CPT0001500009
Tumor
0.7
CPT0000870016
Tumor
0.7
CPT0001220008
Tumor
0.7
CPT0065870003
Tumor
0.6
CPT0007320003
Tumor
0.6
CPT0026420001
Normal
0.6
CPT0089460004
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0015810003
Tumor
0.4
CPT0092800003
Normal
0.4
CPT0077490003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0092310003
Normal
0.3
CPT0026410003
Tumor
0.3
CPT0014350001
Normal
0.3
CPT0086370003
Normal
0.3
CPT0025060001
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0086360003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0066470004
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0019990003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0023710001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0000640003
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0001550001
Normal
-0.3
CPT0069000003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0001510001
Normal
-0.3
CPT0088630003
Tumor
-0.3
CPT0086830003
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0025050003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0000660001
Normal
-0.4
CPT0078800003
Tumor
-0.4
CPT0092290003
Tumor
-0.5
CPT0069190001
Normal
-0.5
CPT0092790003
Tumor
-0.5
CPT0084590001
Normal
-0.6
CPT0085670003
Tumor
-0.6
CPT0079230003
Tumor
-0.6
CPT0075560003
Tumor
-0.7
CPT0084560003
Tumor
-0.7
CPT0088970003
Tumor
-1.4
CPT0002370001
Normal
N/A
CPT0088570001
Normal
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0021240003
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0077140001
Normal
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0020120003
Tumor
N/A
CPT0088500001
Normal
N/A
CPT0063630003
Tumor
N/A
CPT0086950003
Tumor
N/A
CPT0014470001
Normal
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0001270001
Normal
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0078510003
Tumor
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0077110003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0076350001
Normal
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0079510001
Normal
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0079430001
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0075130003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
