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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAC1 is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 1.96
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
0.51
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
50%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
69%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
245.0
Number of samples
283
Samples
Sample
Description
TPM
TCGA-JW-A5VL-01A
0 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
704.9
TCGA-EA-A44S-01A
0 years, female, white, stage:Stage IIIB, alive, 369 days
614.7
TCGA-EK-A2RB-01A
0 years, female, white, stage:Stage IVB, alive, 9 days
587.6
TCGA-FU-A3HY-01A
0 years, female, white, stage:Stage IB, alive, 954 days
532.1
TCGA-EK-A2RE-01A
0 years, female, white, stage:Stage IIA, alive, 57 days
525.4
TCGA-EA-A3HR-01A
0 years, female, white, stage:Stage II, alive, 940 days
525.2
TCGA-VS-A8EK-01A
0 years, female, white, stage:Stage IVA, dead, 829 days
522.1
TCGA-HM-A3JJ-01A
0 years, female, black or african american, stage:Stage IB, dead, 659 days
518.4
TCGA-DS-A1O9-01A
0 years, female, white, stage:Stage IVA, dead, 266 days
516.0
TCGA-LP-A5U3-01A
0 years, female, asian, stage:Stage IB, alive, 25 days
509.0
TCGA-EK-A2RC-01A
0 years, female, stage:Stage IB, alive, 129 days
500.4
TCGA-VS-A9U7-01A
0 years, female, white, stage:Stage IB, alive, 1472 days
490.8
TCGA-EA-A3QE-01A
0 years, female, white, stage:Stage IB, alive, 761 days
482.6
TCGA-MU-A51Y-01A
0 years, female, white, stage:Stage IIA, alive, 854 days
474.8
TCGA-DS-A1OB-01A
0 years, female, white, stage:Stage IB, dead, 861 days
463.3
TCGA-DG-A2KL-01A
0 years, female, stage:Stage IIA, alive, 1367 days
446.2
TCGA-MY-A5BF-01A
0 years, female, white, stage:Stage IIA, alive, 634 days
444.7
TCGA-C5-A7CH-01A
0 years, female, white, stage:Stage IIB, alive, 4694 days
440.6
TCGA-EA-A5ZD-01A
0 years, female, asian, stage:Stage IB, alive, 830 days
435.9
TCGA-C5-A1BL-01A
0 years, female, white, stage:Stage IB, alive, 5271 days
429.4
TCGA-FU-A5XV-01A
0 years, female, white, stage:Stage IIIB, alive, 321 days
424.8
TCGA-Q1-A73Q-01A
0 years, female, white, stage:Stage I, alive, 284 days
423.7
TCGA-FU-A3TQ-01A
0 years, female, white, stage:Stage IIIB, alive, 795 days
422.0
TCGA-JW-A5VJ-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
419.7
TCGA-EK-A2PG-01A
0 years, female, black or african american, stage:'--, alive, 46 days
417.7
TCGA-EK-A2RO-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
417.3
TCGA-EK-A2RN-01A
0 years, female, white, stage:Stage IB, alive, 71 days
413.5
TCGA-EA-A50E-01A
0 years, female, asian, stage:Stage IVA, dead, 227 days
405.6
TCGA-C5-A905-01A
0 years, female, black or african american, stage:Stage IB, alive, 4879 days
397.2
TCGA-JX-A3Q0-01A
0 years, female, black or african american, stage:Stage III, alive, 6375 days
396.8
TCGA-DS-A1OA-01A
0 years, female, asian, stage:Stage IB, dead, 879 days
394.8
TCGA-C5-A3HL-01A
0 years, female, white, stage:Stage IB, alive, 621 days
390.9
TCGA-XS-A8TJ-01A
0 years, female, black or african american, stage:Stage IB, alive, 890 days
388.7
TCGA-C5-A1BM-01A
0 years, female, black or african american, stage:Stage IB, dead, 2520 days
377.7
TCGA-DS-A0VN-01A
0 years, female, white, stage:Stage IB, alive, 3609 days
372.4
TCGA-JW-AAVH-01A
0 years, female, white, stage:Stage IB, alive, 552 days
371.5
TCGA-ZJ-AAX4-01A
0 years, female, white, stage:Stage II, alive, 21 days
362.5
TCGA-VS-A94Z-01A
0 years, female, white, stage:Stage IIB, alive, 1015 days
361.8
TCGA-Q1-A6DW-01A
0 years, female, white, stage:Stage I, alive, 534 days
360.8
TCGA-JX-A5QV-01A
0 years, female, white, stage:Stage IB, alive, 636 days
357.6
TCGA-EA-A78R-01A
0 years, female, asian, stage:Stage IB, alive, 410 days
357.6
TCGA-VS-A8EG-01A
0 years, female, stage:Stage IB, alive, 1386 days
353.1
TCGA-EA-A5FO-01A
0 years, female, white, stage:Stage IB, alive, 815 days
352.4
TCGA-4J-AA1J-01A
0 years, female, white, stage:Stage IB, alive, 542 days
350.9
TCGA-MA-AA3Z-01A
0 years, female, white, stage:Stage IB, alive, 595 days
350.0
TCGA-VS-A9UM-01A
0 years, female, black or african american, stage:Stage IVB, dead, 829 days
350.0
TCGA-FU-A3YQ-01A
0 years, female, white, stage:Stage IB, alive, 861 days
346.9
TCGA-DS-A5RQ-01A
0 years, female, white, stage:Stage IB, alive, 512 days
343.5
TCGA-IR-A3LK-01A
0 years, female, white, stage:Stage IB, dead, 908 days
341.1
TCGA-EK-A2RM-01A
0 years, female, white, stage:Stage IB, alive, 50 days
340.3
TCGA-VS-A9UB-01A
0 years, female, stage:Stage IIB, alive, 911 days
340.2
TCGA-EA-A97N-01A
0 years, female, white, stage:Stage IB, alive, 11 days
340.2
TCGA-FU-A3TX-01A
0 years, female, stage:Stage IB, alive, 45 days
340.1
TCGA-MU-A5YI-01A
0 years, female, black or african american, stage:Stage IA, alive, 1053 days
339.7
TCGA-DS-A0VL-01A
0 years, female, white, stage:Stage IB, dead, 1692 days
338.1
TCGA-C5-A0TN-01A
0 years, female, black or african american, stage:Stage IB, dead, 348 days
335.8
TCGA-VS-A9UY-01A
0 years, female, stage:Stage IVB, dead, 555 days
335.3
TCGA-EA-A3HT-01A
0 years, female, white, stage:Stage IB, alive, 954 days
335.1
TCGA-FU-A3WB-01A
0 years, female, white, stage:Stage IIA, alive, 491 days
335.0
TCGA-C5-A1M9-01A
0 years, female, white, stage:Stage IB, dead, 1065 days
334.6
TCGA-EA-A6QX-01A
0 years, female, asian, stage:Stage IIIB, alive, 730 days
331.8
TCGA-VS-A8EL-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1992 days
328.4
TCGA-IR-A3L7-01A
0 years, female, white, stage:Stage IB, alive, 4483 days
327.5
TCGA-MA-AA42-01A
0 years, female, white, stage:Stage IIB, alive, 259 days
326.9
TCGA-R2-A69V-01A
0 years, female, white, stage:Stage IB, alive, 596 days
321.2
TCGA-VS-A94Y-01A
0 years, female, white, stage:Stage IIB, dead, 144 days
320.3
TCGA-C5-A1MN-01A
0 years, female, white, stage:Stage IIIB, dead, 1245 days
319.9
TCGA-C5-A7UE-01A
0 years, female, white, stage:Stage IB, alive, 4738 days
319.4
TCGA-EK-A2RL-01A
0 years, female, black or african american, stage:Stage IB, dead, 1453 days
317.6
TCGA-VS-A9V4-01A
0 years, female, white, stage:Stage IVA, dead, 132 days
313.9
TCGA-JW-A69B-01A
0 years, female, white, stage:Stage IB, alive, 863 days
311.0
TCGA-Q1-A73O-01A
0 years, female, stage:Stage IB, alive, 428 days
304.9
TCGA-C5-A1MK-01A
0 years, female, white, stage:Stage IIIB, dead, 74 days
304.5
TCGA-C5-A8YQ-01A
0 years, female, white, stage:Stage IB, dead, 715 days
302.9
TCGA-C5-A7CO-01A
0 years, female, white, stage:Stage IB, alive, 4482 days
300.3
TCGA-C5-A2LZ-01A
0 years, female, white, stage:Stage IIIB, dead, 3046 days
299.5
TCGA-C5-A7UH-01A
0 years, female, white, stage:Stage IIIB, alive, 3988 days
297.5
TCGA-EA-A1QT-01A
0 years, female, white, stage:Stage IB, alive, 1243 days
295.2
TCGA-VS-A8QH-01A
0 years, female, white, stage:Stage IB, dead, 1210 days
292.1
TCGA-MU-A8JM-01A
0 years, female, white, stage:Stage IB, alive, 607 days
290.3
TCGA-EK-A2R8-01A
0 years, female, white, stage:Stage IB, alive, 44 days
289.7
TCGA-DS-A1OC-01A
0 years, female, white, stage:Stage IB, alive, 376 days
289.3
TCGA-DS-A0VM-01A
0 years, female, white, stage:Stage IB, alive, 3589 days
289.2
TCGA-EK-A3GJ-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
288.6
TCGA-EA-A3HU-01A
0 years, female, white, stage:Stage II, alive, 1013 days
288.2
TCGA-VS-A9V2-01A
0 years, female, white, stage:Stage IB, alive, 555 days
287.2
TCGA-C5-A7UC-01A
0 years, female, white, stage:Stage IB, dead, 523 days
287.0
TCGA-VS-A9UR-01A
0 years, female, white, stage:Stage IIA, alive, 793 days
286.5
TCGA-FU-A23L-01A
0 years, female, white, stage:Stage IIA, alive, 725 days
285.3
TCGA-C5-A1M7-01A
0 years, female, white, stage:Stage IB, alive, 1409 days
285.1
TCGA-VS-A9UJ-01A
0 years, female, stage:Stage IIB, dead, 52 days
285.0
TCGA-FU-A2QG-01A
0 years, female, white, stage:Stage IB, alive, 579 days
284.8
TCGA-MA-AA3X-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 617 days
282.4
TCGA-EK-A3GK-01A
0 years, female, white, stage:Stage IB, alive, 15 days
279.1
TCGA-EX-A3L1-01A
0 years, female, white, stage:Stage IIA, alive, 463 days
278.3
TCGA-LP-A4AW-01A
0 years, female, asian, stage:Stage IA, alive, 27 days
275.8
TCGA-VS-A8QF-01A
0 years, female, white, stage:Stage IIB, alive, 1800 days
274.2
TCGA-FU-A57G-01A
0 years, female, white, stage:Stage IB, alive, 1078 days
273.7
TCGA-EA-A5O9-01A
0 years, female, white, stage:Stage IB, alive, 788 days
272.1
TCGA-BI-A0VR-01A
0 years, female, white, stage:Stage IIIB, alive, 1505 days
268.7
TCGA-VS-A9UI-01A
0 years, female, white, stage:Stage IIB, dead, 1372 days
268.3
TCGA-VS-A9UQ-01A
0 years, female, stage:Stage IB, alive, 1263 days
268.1
TCGA-C5-A7XC-01A
0 years, female, white, stage:Stage IB, alive, 1551 days
267.7
TCGA-BI-A20A-01A
0 years, female, white, stage:Stage IB, alive, 720 days
265.8
TCGA-DG-A2KM-01A
0 years, female, stage:Stage IB, alive, 1946 days
263.7
TCGA-WL-A834-01A
0 years, female, white, stage:'--, alive, 791 days
262.4
TCGA-C5-A2LS-01A
0 years, female, white, stage:Stage IB, alive, 1345 days
260.6
TCGA-C5-A1M5-01A
0 years, female, white, stage:Stage IB, dead, 2052 days
260.5
TCGA-MY-A5BD-01A
0 years, female, white, stage:Stage IIB, alive, 1667 days
259.7
TCGA-C5-A2M1-01A
0 years, female, white, stage:Stage IB, alive, 1169 days
259.0
TCGA-FU-A3NI-01A
0 years, female, white, stage:Stage IB, dead, 638 days
258.5
TCGA-FU-A40J-01A
0 years, female, white, stage:Stage IIIB, alive, 426 days
257.7
TCGA-C5-A8XI-01A
0 years, female, black or african american, stage:Stage IB, alive, 254 days
256.7
TCGA-HG-A2PA-01A
0 years, female, white, stage:Stage IB, dead, 773 days
256.6
TCGA-IR-A3LF-01A
0 years, female, white, stage:Stage IB, alive, 2949 days
256.5
TCGA-VS-A9U6-01A
0 years, female, white, stage:Stage IVB, alive, 1320 days
255.5
TCGA-ZX-AA5X-01A
0 years, female, white, stage:Stage IIIB, alive, 119 days
254.2
TCGA-HM-A4S6-01A
0 years, female, white, stage:Stage IIIB, alive, 454 days
253.1
TCGA-ZJ-A8QR-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
251.9
TCGA-EA-A3HQ-01A
0 years, female, white, stage:Stage II, alive, 1136 days
249.6
TCGA-EX-A8YF-01A
0 years, female, white, stage:Stage IB, alive, 473 days
249.3
TCGA-Q1-A6DV-01A
0 years, female, asian, stage:Stage IB, alive, 491 days
248.0
TCGA-UC-A7PG-01A
0 years, female, white, stage:Stage IIIB, dead, 370 days
247.8
TCGA-IR-A3LB-01A
0 years, female, white, stage:Stage IB, dead, 2032 days
246.2
TCGA-Q1-A73S-01A
0 years, female, white, stage:Stage IB, alive, 688 days
245.8
TCGA-ZJ-AAXA-01A
0 years, female, white, stage:Stage IB, alive, 43 days
244.7
TCGA-VS-A8QM-01A
0 years, female, stage:Stage IVB, dead, 951 days
244.6
TCGA-JW-A5VG-01A
0 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
244.6
TCGA-EK-A2H0-01A
0 years, female, white, stage:Stage IIB, alive, 1847 days
244.4
TCGA-EK-A2RK-01A
0 years, female, white, stage:Stage IA, alive, 13 days
244.4
TCGA-IR-A3LL-01A
0 years, female, white, stage:Stage IB, alive, 1106 days
242.5
TCGA-C5-A2M2-01A
0 years, female, white, stage:Stage IB, dead, 1011 days
240.0
TCGA-VS-AA62-01A
0 years, female, white, stage:Stage IIB, dead, 469 days
239.9
TCGA-IR-A3LC-01A
0 years, female, white, stage:Stage IB, alive, 3935 days
239.8
TCGA-EK-A2RA-01A
0 years, female, stage:Stage IIA, alive, 1246 days
239.5
TCGA-DS-A0VK-01A
0 years, female, white, stage:Stage IB, dead, 1118 days
237.0
TCGA-C5-A8ZZ-01A
0 years, female, white, stage:Stage IIB, alive, 636 days
236.1
TCGA-VS-A950-01A
0 years, female, stage:Stage IIIA, alive, 1221 days
234.5
TCGA-DR-A0ZM-01A
0 years, female, white, stage:Stage IIIB, alive, 1791 days
234.2
TCGA-DG-A2KK-01A
0 years, female, stage:Stage IIIB, alive, 2496 days
233.5
TCGA-EA-A411-01A
0 years, female, white, stage:Stage IB, alive, 747 days
229.7
TCGA-EA-A439-01A
0 years, female, asian, stage:Stage IIA, alive, 965 days
228.7
TCGA-VS-A9V3-01A
0 years, female, white, stage:Stage IVB, alive, 540 days
227.2
TCGA-DG-A2KH-01A
0 years, female, stage:Stage IB, alive, 34 days
226.6
TCGA-EK-A2PL-01A
0 years, female, white, stage:Stage IIIB, alive, 13 days
226.0
TCGA-C5-A1M6-01A
0 years, female, white, stage:Stage IIB, dead, 955 days
220.1
TCGA-EA-A3QD-01A
0 years, female, white, stage:Stage IIIB, alive, 397 days
217.3
TCGA-VS-A9UD-01A
0 years, female, white, stage:Stage IIIA, alive, 739 days
217.2
TCGA-DS-A7WF-01A
0 years, female, stage:Stage IB, dead, 492 days
217.0
TCGA-VS-A953-01A
0 years, female, stage:Stage IVA, dead, 477 days
216.7
TCGA-Q1-A5R2-01A
0 years, female, white, stage:'--, alive, 499 days
216.5
TCGA-C5-A1MP-01A
0 years, female, black or african american, stage:Stage IB, alive, 109 days
214.7
TCGA-C5-A2LT-01A
0 years, female, white, stage:Stage IB, alive, 2226 days
211.3
TCGA-EX-A69M-01A
0 years, female, white, stage:Stage IB, dead, 253 days
211.1
TCGA-C5-A7CJ-01A
0 years, female, white, stage:Stage IIA, dead, 3097 days
209.9
TCGA-EK-A2IR-01A
0 years, female, white, stage:Stage IB, alive, 3442 days
208.6
TCGA-C5-A1MI-01A
0 years, female, white, stage:Stage IB, dead, 1083 days
208.5
TCGA-EK-A3GN-01A
0 years, female, white, stage:Stage IIIB, alive, 27 days
207.9
TCGA-VS-A9UO-01A
0 years, female, white, stage:Stage IIB, alive, 1456 days
207.5
TCGA-EA-A4BA-01A
0 years, female, white, stage:Stage IB, alive, 755 days
206.1
TCGA-MY-A913-01A
0 years, female, black or african american, stage:Stage IIA, alive, 524 days
205.9
TCGA-C5-A2LY-01A
0 years, female, white, stage:Stage IB, alive, 2383 days
204.4
TCGA-EK-A2PM-01A
0 years, female, white, stage:Stage IIB, alive, 18 days
201.5
TCGA-VS-A957-01A
0 years, female, white, stage:Stage IB, alive, 1688 days
201.0
TCGA-C5-A8XH-01A
0 years, female, white, stage:Stage IB, dead, 1394 days
199.5
TCGA-VS-A9V0-01A
0 years, female, stage:Stage IB, alive, 573 days
198.6
TCGA-EA-A3HS-01A
0 years, female, white, stage:Stage IB, alive, 959 days
198.4
TCGA-Q1-A6DT-01A
0 years, female, white, stage:Stage I, dead, 275 days
196.8
TCGA-C5-A1MH-01A
0 years, female, white, stage:Stage IIIB, dead, 1186 days
194.7
TCGA-VS-A952-01A
0 years, female, white, stage:Stage IB, alive, 1778 days
194.4
TCGA-EA-A5ZE-01A
0 years, female, asian, stage:Stage IB, alive, 829 days
193.8
TCGA-C5-A8XJ-01A
0 years, female, white, stage:Stage IB, alive, 4467 days
193.7
TCGA-FU-A770-01A
0 years, female, white, stage:Stage IIIB, alive, 34 days
193.0
TCGA-C5-A7CL-01A
0 years, female, white, stage:Stage IIIB, dead, 471 days
191.2
TCGA-RA-A741-01A
0 years, female, white, stage:Stage IIB, alive, 444 days
191.1
TCGA-EK-A2GZ-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 383 days
190.8
TCGA-EK-A2RJ-01A
0 years, female, white, stage:Stage IB, alive, 53 days
190.8
TCGA-Q1-A73P-01A
0 years, female, white, stage:Stage IB, alive, 483 days
190.6
TCGA-Q1-A73R-01A
0 years, female, white, stage:Stage I, alive, 567 days
189.5
TCGA-VS-A958-01A
0 years, female, white, stage:Stage IIB, alive, 1525 days
187.6
TCGA-C5-A8YT-01A
0 years, female, white, stage:Stage IB, dead, 633 days
187.2
TCGA-VS-A8Q9-01A
0 years, female, white, stage:Stage IB, alive, 1630 days
185.2
TCGA-VS-A9UH-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1427 days
184.5
TCGA-C5-A7X5-01A
0 years, female, black or african american, stage:Stage IVB, dead, 414 days
184.1
TCGA-C5-A907-01A
0 years, female, white, stage:Stage IB, alive, 448 days
183.3
TCGA-EK-A2H1-01A
0 years, female, white, stage:Stage IB, alive, 799 days
183.2
TCGA-DS-A3LQ-01A
0 years, female, stage:Stage IIIB, alive, 699 days
182.9
TCGA-JW-A5VI-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
181.7
TCGA-MA-AA41-01A
0 years, female, white, stage:Stage IIB, alive, 279 days
180.4
TCGA-C5-A1BJ-01A
0 years, female, white, stage:Stage IIB, alive, 4385 days
180.3
TCGA-LP-A4AU-01A
0 years, female, asian, stage:Stage IIIB, alive, 343 days
179.9
TCGA-C5-A7CK-01A
0 years, female, white, stage:Stage IVA, dead, 4086 days
178.7
TCGA-EA-A410-01A
0 years, female, white, stage:Stage IIA, alive, 803 days
177.0
TCGA-C5-A1ML-01A
0 years, female, white, stage:Stage IB, dead, 636 days
176.6
TCGA-JW-A5VK-01A
0 years, female, black or african american, stage:Stage IB, alive, 623 days
176.5
TCGA-MA-AA43-01A
0 years, female, white, stage:Stage IIIB, alive, 346 days
175.8
TCGA-VS-A8QA-01A
0 years, female, stage:Stage IB, alive, 1099 days
174.9
TCGA-LP-A4AX-01A
0 years, female, asian, stage:Stage IB, alive, 380 days
174.2
TCGA-C5-A1ME-01A
0 years, female, white, stage:Stage IB, alive, 1756 days
172.7
TCGA-EX-A1H5-01A
0 years, female, black or african american, stage:Stage IIB, alive, 619 days
171.5
TCGA-2W-A8YY-01A
0 years, female, white, stage:Stage IB, alive, 533 days
171.3
TCGA-BI-A0VS-01A
0 years, female, white, stage:Stage IB, alive, 1735 days
169.4
TCGA-VS-A8Q8-01A
0 years, female, white, stage:Stage IB, dead, 978 days
168.4
TCGA-EK-A2R9-01A
0 years, female, white, stage:Stage IB, alive, 4 days
167.8
TCGA-C5-A3HF-01A
0 years, female, white, stage:Stage IB, dead, 543 days
167.6
TCGA-VS-A8QC-01A
0 years, female, white, stage:Stage IVA, dead, 350 days
166.6
TCGA-C5-A8XK-01A
0 years, female, black or african american, stage:'--, alive, 3039 days
164.6
TCGA-MY-A5BE-01A
0 years, female, black or african american, stage:Stage IB, alive, 1066 days
163.5
TCGA-EK-A2IP-01A
0 years, female, white, stage:Stage IB, alive, 202 days
163.5
TCGA-VS-A9UV-01A
0 years, female, stage:Stage IVA, dead, 104 days
162.5
TCGA-LP-A5U2-01A
0 years, female, asian, stage:Stage IIIB, alive, 9 days
162.1
TCGA-VS-A8EC-01A
0 years, female, white, stage:Stage IIIB, alive, 1415 days
161.8
TCGA-VS-A954-01A
0 years, female, stage:Stage IIIB, alive, 1714 days
161.6
TCGA-DR-A0ZL-01A
0 years, female, asian, stage:Stage IB, alive, 2669 days
160.8
TCGA-C5-A1MJ-01A
0 years, female, white, stage:Stage IB, dead, 14 days
160.7
TCGA-C5-A1M8-01A
0 years, female, white, stage:Stage IB, alive, 919 days
158.8
TCGA-ZJ-A8QQ-01A
0 years, female, white, stage:Stage IIB, alive, 2056 days
158.3
TCGA-EK-A2PK-01A
0 years, female, white, stage:Stage IB, alive, 12 days
158.0
TCGA-VS-A9UZ-01A
0 years, female, white, stage:Stage IB, alive, 2044 days
156.0
TCGA-JX-A3Q8-01A
0 years, female, asian, stage:Stage IB, alive, 1357 days
155.8
TCGA-VS-A94X-01A
0 years, female, black or african american, stage:Stage IIB, dead, 506 days
155.7
TCGA-GH-A9DA-01A
0 years, female, white, stage:Stage IB, alive, 540 days
155.4
TCGA-C5-A2LV-01A
0 years, female, black or african american, stage:Stage IB, alive, 2234 days
154.6
TCGA-IR-A3LI-01A
0 years, female, white, stage:Stage IVB, alive, 2493 days
152.7
TCGA-MA-AA3W-01A
0 years, female, white, stage:Stage IB, alive, 685 days
151.7
TCGA-JW-A852-01A
0 years, female, white, stage:Stage IIB, dead, 252 days
149.6
TCGA-C5-A7X8-01A
0 years, female, white, stage:Stage IB, alive, 83 days
148.6
TCGA-VS-A9UC-01A
0 years, female, stage:Stage IIB, alive, 825 days
148.0
TCGA-EA-A556-01A
0 years, female, white, stage:Stage IB, alive, 453 days
147.4
TCGA-DS-A1OD-01A
0 years, female, white, stage:Stage IB, alive, 3874 days
145.9
TCGA-HM-A6W2-01A
0 years, female, black or african american, stage:Stage IVB, alive, 287 days
145.7
TCGA-Q1-A5R3-01A
0 years, female, white, stage:'--, alive, 485 days
145.1
TCGA-VS-A9UU-01A
0 years, female, stage:Stage IIB, alive, 442 days
143.7
TCGA-EA-A1QS-01A
0 years, female, white, stage:Stage IB, alive, 1203 days
143.3
TCGA-FU-A3HZ-01A
0 years, female, white, stage:Stage IIA, alive, 1103 days
141.1
TCGA-EX-A449-01A
0 years, female, white, stage:Stage IVB, alive, 447 days
139.6
TCGA-C5-A7CG-01A
0 years, female, white, stage:Stage IB, alive, 6408 days
139.1
TCGA-HM-A3JK-01A
0 years, female, white, stage:Stage IIA, alive, 632 days
138.0
TCGA-JW-A5VH-01A
0 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
137.7
TCGA-JX-A3PZ-01A
0 years, female, white, stage:Stage IB, dead, 642 days
137.1
TCGA-EK-A2PI-01A
0 years, female, white, stage:Stage IIIB, alive, 586 days
134.8
TCGA-MA-AA3Y-01A
0 years, female, white, stage:Stage IB, alive, 542 days
134.7
TCGA-FU-A3EO-01A
0 years, female, white, stage:Stage IIB, alive, 490 days
134.7
TCGA-FU-A23K-01A
0 years, female, white, stage:Stage IIIB, alive, 372 days
133.0
TCGA-C5-A3HE-01A
0 years, female, white, stage:Stage IB, alive, 548 days
132.5
TCGA-EA-A3Y4-01A
0 years, female, white, stage:Stage IB, alive, 1122 days
130.4
TCGA-VS-A9V1-01A
0 years, female, white, stage:Stage IVB, dead, 157 days
129.5
TCGA-UC-A7PF-01A
0 years, female, stage:Stage IB, dead, 2859 days
126.7
TCGA-DS-A7WI-01A
0 years, female, white, stage:Stage IIA, dead, 252 days
124.2
TCGA-VS-A8EJ-01A
0 years, female, white, stage:Stage IIB, dead, 607 days
124.2
TCGA-C5-A2LX-01A
0 years, female, white, stage:Stage IB, alive, 2526 days
120.6
TCGA-Q1-A5R1-01A
0 years, female, white, stage:Stage IB, alive, 474 days
120.2
TCGA-EX-A69L-01A
0 years, female, asian, stage:Stage IB, alive, 602 days
118.7
TCGA-C5-A1MQ-01A
0 years, female, white, stage:Stage IIA, alive, 1031 days
117.6
TCGA-VS-A94W-01A
0 years, female, white, stage:Stage IIB, alive, 1243 days
114.9
TCGA-VS-A9U5-01A
0 years, female, white, stage:Stage IIB, alive, 1535 days
112.9
TCGA-C5-A901-01A
0 years, female, white, stage:'--, alive, 518 days
112.8
TCGA-IR-A3LA-01A
0 years, female, white, stage:Stage IB, alive, 4172 days
112.3
TCGA-IR-A3LH-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2394 days
112.2
TCGA-VS-A8EI-01A
0 years, female, white, stage:Stage IIB, alive, 729 days
109.6
TCGA-EA-A5ZF-01A
0 years, female, asian, stage:Stage IB, alive, 828 days
108.3
TCGA-UC-A7PI-01A
0 years, female, white, stage:Stage IB, alive, 2114 days
108.2
TCGA-PN-A8MA-01A
0 years, female, black or african american, stage:Stage IIB, alive, 90 days
106.9
TCGA-VS-A9V5-01A
0 years, female, white, stage:Stage IIB, dead, 494 days
106.4
TCGA-C5-A7CM-01A
0 years, female, white, stage:Stage IB, alive, 619 days
104.6
TCGA-C5-A8YR-01A
0 years, female, white, stage:Stage IB, dead, 837 days
104.3
TCGA-EA-A43B-01A
0 years, female, white, stage:Stage IB, alive, 791 days
104.0
TCGA-C5-A7UI-01A
0 years, female, black or african american, stage:Stage IB, dead, 2888 days
102.9
TCGA-VS-A959-01A
0 years, female, stage:Stage IIB, alive, 1561 days
102.3
TCGA-EK-A2R7-01A
0 years, female, white, stage:Stage IB, alive, 27 days
101.4
TCGA-VS-A8EH-01A
0 years, female, stage:Stage IIIB, alive, 986 days
100.7
TCGA-UC-A7PD-01A
0 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
99.4
TCGA-VS-A9UL-01A
0 years, female, white, stage:Stage IIIB, dead, 442 days
98.6
TCGA-C5-A902-01A
0 years, female, black or african american, stage:Stage IB, alive, 149 days
96.8
TCGA-VS-A8EB-01A
0 years, female, white, stage:Stage IIIB, dead, 305 days
95.3
TCGA-LP-A7HU-01A
0 years, female, asian, stage:Stage II, alive, 406 days
94.4
TCGA-ZJ-AAXU-01A
0 years, female, white, stage:Stage IIB, alive, 5 days
88.8
TCGA-C5-A1MF-01A
0 years, female, white, stage:Stage IB, alive, 1617 days
84.4
TCGA-DS-A7WH-01A
0 years, female, white, stage:Stage IB, alive, 533 days
77.8
TCGA-C5-A7X3-01A
0 years, female, white, stage:Stage IIIB, dead, 284 days
75.4
TCGA-DG-A2KJ-01A
0 years, female, stage:Stage IIIB, alive, 2893 days
50.7
TCGA-VS-A9UP-01A
0 years, female, stage:Stage IIA, alive, 1444 days
45.9
TCGA-VS-A9UT-01A
0 years, female, asian, stage:Stage IB, alive, 482 days
28.1
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.