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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DNAJB2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
142.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
119.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
113.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
92.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
90.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
89.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
85.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
80.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
80.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
77.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
76.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
68.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
67.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
65.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
65.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
65.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
64.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
63.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
63.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
61.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
61.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
61.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
60.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
60.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
59.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
59.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
55.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
55.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
54.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
54.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
54.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
53.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
51.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
51.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
50.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
50.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
50.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
49.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
48.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
48.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
48.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
47.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
45.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
45.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
43.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
43.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
41.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
40.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
39.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
34.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
32.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
30.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
30.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
29.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
28.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
26.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
26.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
25.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
23.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
19.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
13.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
8.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
8.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DNAJB2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
194.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
160.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
111.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
103.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
102.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
99.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
98.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
95.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
93.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
92.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
91.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
89.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
89.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
88.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
88.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
88.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
87.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
86.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
83.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
83.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
82.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
82.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
82.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
79.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
78.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
78.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
77.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
77.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
76.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
74.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
74.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
73.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
73.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
71.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
71.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
70.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
70.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
70.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
70.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
69.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
69.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
69.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
69.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
68.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
68.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
68.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
68.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
68.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
68.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
67.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
66.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
66.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
66.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
65.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
65.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
65.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
65.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
65.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
65.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
65.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
64.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
64.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
64.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
64.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
64.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
64.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
64.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
64.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
64.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
63.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
63.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
63.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
63.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
63.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
62.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
62.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
62.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
62.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
62.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
61.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
61.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
61.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
61.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
61.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
61.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
61.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
61.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
61.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
60.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
60.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
60.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
60.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
60.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
59.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
59.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
59.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
59.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
59.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
59.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
58.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
58.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
58.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
58.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
58.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
58.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
58.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
58.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
58.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
58.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
57.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
57.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
57.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
57.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
57.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
57.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
57.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
57.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
57.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
57.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
56.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
56.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
56.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
56.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
56.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
56.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
56.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
56.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
56.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
56.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
56.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
56.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
55.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
55.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
55.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
55.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
55.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
55.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
55.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
55.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
55.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
55.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
55.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
55.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
55.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
54.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
54.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
54.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
54.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
54.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
54.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
54.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
54.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
54.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
54.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
54.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
54.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
54.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
53.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
53.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
53.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
53.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
53.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
53.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
53.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
53.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
53.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
53.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
53.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
53.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
53.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
52.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
52.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
52.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
52.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
52.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
52.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
52.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
52.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
52.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
52.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
52.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
52.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
52.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
52.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
52.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
52.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
51.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
51.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
51.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
51.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
51.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
51.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
51.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
51.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
51.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
51.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
51.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
50.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
50.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
50.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
50.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
50.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
50.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
50.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
50.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
50.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
50.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
49.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
49.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
49.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
49.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
49.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
49.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
49.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
49.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
49.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
49.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
49.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
49.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
49.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
49.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
49.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
49.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
48.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
48.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
48.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
48.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
48.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
48.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
47.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
47.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
47.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
47.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
47.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
47.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
47.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
47.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
46.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
46.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
46.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
46.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
46.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
46.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
46.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
46.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
46.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
46.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
46.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
46.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
46.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
46.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
46.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
45.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
45.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
45.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
45.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
45.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
45.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
45.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
45.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
45.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
45.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
45.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
45.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
45.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
45.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
45.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
44.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
44.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
44.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
44.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
44.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
44.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
44.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
44.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
44.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
43.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
43.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
43.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
43.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
43.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
43.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
43.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
43.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
43.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
43.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
43.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
43.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
43.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
43.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
43.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
43.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
43.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
43.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
42.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
42.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
42.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
42.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
42.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
42.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
42.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
42.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
42.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
42.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
42.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
42.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
42.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
42.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
42.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
42.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
42.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
41.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
41.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
41.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
41.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
41.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
41.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
41.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
41.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
41.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
41.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
41.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
41.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
41.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
41.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
41.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
41.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
40.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
40.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
40.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
40.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
40.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
40.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
40.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
40.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
40.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
40.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
40.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
40.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
40.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
40.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
40.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
40.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
40.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
40.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
40.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
40.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
40.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
39.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
39.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
39.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
39.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
39.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
39.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
39.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
39.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
39.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
39.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
39.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
39.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
39.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
39.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
39.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
38.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
38.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
38.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
38.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
38.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
38.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
38.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
38.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
38.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
38.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
38.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
37.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
37.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
37.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
37.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
37.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
37.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
37.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
37.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
37.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
37.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
36.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
36.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
36.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
36.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
36.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
36.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
36.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
36.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
35.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
35.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
35.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
35.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
35.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
35.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
35.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
35.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
35.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
35.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
35.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
35.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
35.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
34.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
34.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
34.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
34.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
34.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
33.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
33.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
33.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
33.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
32.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
32.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
32.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
32.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
32.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
32.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
32.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
32.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
32.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
32.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
31.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
31.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
31.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
31.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
31.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
31.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
31.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
31.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
31.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
31.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
31.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
31.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
30.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
30.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
30.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
30.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
30.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
30.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
30.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
30.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
30.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
30.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
29.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
29.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
29.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
29.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
29.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
29.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
29.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
29.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
29.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
28.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
28.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
28.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
28.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
28.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
28.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
28.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
28.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
28.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
28.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
28.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
27.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
27.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
27.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
27.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
27.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
27.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
27.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
27.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
26.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
26.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
26.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
26.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
26.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
26.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
26.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
26.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
26.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
25.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
25.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
25.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
25.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
25.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
24.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
24.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
24.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
23.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
23.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
23.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
23.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
22.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
22.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
22.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
21.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
21.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
21.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
21.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
21.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
21.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
20.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
19.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
18.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
17.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
16.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
16.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
16.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
10.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DNAJB2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
129.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
83.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
83.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
81.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
81.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
81.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
79.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
74.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
73.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
72.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
72.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
71.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
70.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
69.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
68.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
67.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
66.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
66.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
64.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
64.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
64.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
64.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
63.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
62.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
62.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
62.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
62.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
61.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
60.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
59.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
58.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
57.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
56.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
56.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
56.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
56.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
56.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
55.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
55.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
55.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
55.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
55.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
55.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
54.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
54.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
53.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
53.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
53.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
52.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
52.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
52.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
51.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
51.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
51.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
50.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
50.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
50.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
49.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
48.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
48.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
48.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
48.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
48.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
47.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
47.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
46.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
45.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
45.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
45.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
44.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
43.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
43.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
42.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
42.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
42.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
42.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
41.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
40.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
40.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
40.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
40.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
38.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
38.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
38.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
38.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
38.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
37.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
37.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
36.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
34.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
33.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
31.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
30.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
30.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
28.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
27.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
21.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DNAJB2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
109.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
102.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
102.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
98.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
97.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
96.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
93.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
91.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
90.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
89.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
87.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
86.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
85.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
85.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
84.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
84.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
82.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
81.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
80.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
80.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
80.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
80.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
79.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
79.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
78.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
76.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
75.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
75.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
75.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
74.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
74.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
74.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
73.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
72.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
72.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
72.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
72.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
71.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
69.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
69.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
68.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
68.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
68.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
68.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
68.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
67.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
67.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
66.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
66.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
66.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
66.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
65.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
65.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
65.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
64.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
64.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
64.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
63.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
63.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
63.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
63.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
63.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
62.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
62.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
62.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
62.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
62.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
62.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
62.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
61.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
61.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
61.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
61.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
61.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
60.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
59.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
59.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
59.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
59.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
59.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
58.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
58.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
58.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
58.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
58.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
57.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
57.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
57.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
57.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
57.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
56.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
56.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
56.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
56.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
56.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
56.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
56.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
56.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
55.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
55.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
55.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
55.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
55.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
55.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
54.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
54.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
54.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
53.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
53.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
53.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
53.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
53.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
53.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
53.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
52.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
52.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
52.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
51.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
51.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
51.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
51.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
50.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
50.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
50.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
50.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
50.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
49.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
49.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
49.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
49.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
48.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
48.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
48.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
47.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
47.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
47.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
47.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
47.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
47.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
47.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
46.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
46.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
46.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
46.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
46.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
46.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
46.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
45.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
45.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
45.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
45.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
45.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
44.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
44.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
44.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
44.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
44.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
44.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
44.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
44.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
44.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
44.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
43.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
43.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
43.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
43.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
43.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
43.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
43.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
43.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
43.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
43.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
42.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
42.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
42.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
42.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
42.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
41.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
41.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
41.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
41.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
40.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
40.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
40.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
40.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
40.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
40.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
40.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
39.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
39.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
39.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
39.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
39.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
39.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
39.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
38.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
38.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
38.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
38.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
37.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
36.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
36.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
36.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
36.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
36.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
36.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
36.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
36.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
36.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
36.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
36.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
36.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
36.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
36.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
35.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
35.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
35.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
35.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
35.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
34.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
34.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
34.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
34.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
34.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
34.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
33.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
33.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
33.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
33.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
32.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
32.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
32.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
32.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
32.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
31.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
31.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
31.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
30.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
30.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
30.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
30.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
30.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
30.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
29.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
29.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
29.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
28.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
28.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
28.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
27.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
27.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
27.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
27.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
26.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
26.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
26.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
25.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
25.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
25.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
24.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
23.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
23.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
23.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
22.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
21.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
21.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
20.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
19.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
17.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
17.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
16.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
14.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
5.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
0.7
CPT0079180003
Tumor
0.7
CPT0002350011
Tumor
0.6
CPT0006440003
Tumor
0.6
CPT0092290003
Tumor
0.6
CPT0088690003
Tumor
0.5
CPT0025110003
Tumor
0.5
CPT0015810003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0079480003
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0009000003
Tumor
0.5
CPT0001500009
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0000870016
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0077310003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0000780007
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0088900003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0079510001
Normal
0.3
CPT0064370003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0012280003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0092160003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0023690003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0023710001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0007870001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0012640003
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0014350001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0000890001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0002270011
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0010170001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0092740003
Normal
0.0
CPT0023360001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0026410003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0012180003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0088550004
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0015910003
Tumor
-0.2
CPT0025920001
Normal
-0.2
CPT0069000003
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0078800003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0017850003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0006900003
Tumor
-0.3
CPT0086830003
Normal
-0.4
CPT0065430003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.