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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
114.7
nTPM
GTEx:
114.7
nTPM
FANTOM5:
413.4
Scaled Tags Per Million
Pig:
260.7
nTPM
Mouse:
302.6
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
114.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 114.7
Samples: 105
Max nTPM: 201.2
Min nTPM: 36.1
Std nTPM: 39.4
Median nTPM:
163_1
78 years, male
201.2
350_1
84 years, female
191.3
319_1
81 years, male
185.2
322_1
76 years, male
179.2
320_1
89 years, female
177.8
506_1
65 years, male
177.3
377_1
82 years, female
175.2
352_1
62 years, male
174.2
353_1
82 years, female
172.1
452_1
88 years, female
171.8
351_1
91 years, male
168.6
177_1
74 years, male
166.5
386_1
76 years, male
165.8
243_1
75 years, male
164.6
321_1
62 years, female
163.6
295_1
61 years, female
163.2
349_1
83 years, male
161.8
218_1
71 years, female
161.3
379_1
60 years, male
159.7
356_1
87 years, female
155.5
376_1
75 years, female
154.5
335_1
73 years, female
151.7
172_1
72 years, female
149.6
292_1
71 years, male
148.8
264_1
73 years, female
147.6
318_1
68 years, male
147.6
316_1
62 years, male
145.3
425_1
59 years, female
143.8
354_1
81 years, female
143.5
406_1
79 years, male
143.4
4_1
88 years, female
143.2
6_1
73 years, female
137.0
173_1
67 years, male
135.1
375_1
74 years, female
134.6
293_1
68 years, female
133.1
503_1
68 years, male
131.3
404_1
82 years, female
128.7
17_1
71 years, male
128.2
251_1
78 years, male
127.6
355_1
70 years, female
127.4
394_1
75 years, female
127.0
405_1
91 years, male
125.4
286_1
68 years, female
123.9
317_1
60 years, male
123.7
517_1
88 years, male
122.8
237_1
82 years, male
121.8
447_1
81 years, male
119.2
291_1
76 years, male
116.3
189_1
76 years, male
115.2
480_1
63 years, male
115.2
526_1
61 years, male
115.0
9_1
66 years, female
113.3
254_1
77 years, female
113.3
137_1
83 years, male
112.7
389_1
86 years, female
112.1
266_1
85 years, male
110.3
229_1
69 years, female
108.7
2_1
77 years, female
107.0
246_1
77 years, male
107.0
18_1
88 years, male
106.4
518_1
75 years, female
105.2
115_1
83 years, male
105.0
265_1
87 years, male
104.5
153_1
70 years, female
104.3
99_1
64 years, male
103.8
348_1
84 years, male
102.5
145_1
84 years, male
100.9
120_1
70 years, female
100.1
35_1
74 years, female
100.0
468_1
89 years, male
99.4
384_1
83 years, male
98.4
347_1
72 years, male
94.3
396_1
62 years, male
91.6
109_1
81 years, female
90.6
288_1
66 years, female
89.9
314_1
67 years, male
89.7
324_1
76 years, male
87.8
315_1
62 years, female
85.1
126_1
63 years, male
85.0
217_1
76 years, male
84.8
81_1
67 years, male
80.9
42_1
85 years, male
80.5
311_1
78 years, male
78.6
139_1
64 years, female
77.5
43_1
64 years, female
76.4
142_1
61 years, female
76.4
501_1
88 years, male
76.0
499_1
55 years, female
72.8
41_1
94 years, female
71.0
313_1
79 years, female
69.6
117_1
61 years, male
66.3
32_1
67 years, male
65.5
413_1
59 years, female
63.7
307_1
66 years, female
62.0
415_1
77 years, female
61.1
414_1
84 years, female
61.0
119_1
70 years, female
60.8
162_1
79 years, female
57.6
466_1
57 years, female
57.4
89_1
63 years, male
49.4
149_1
88 years, male
47.5
491_1
89 years, female
40.0
495_1
57 years, female
37.8
490_1
67 years, female
37.1
308_1
70 years, female
36.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
