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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
635.5
nTPM
FANTOM5:
910.0
Scaled Tags Per Million
Pig:
460.3
nTPM
Allen mouse:
15.4
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
635.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 389.1
2301
Female, age 85, both hemispheres
462.4
2090
Male, age 80, both hemispheres
439.1
1984
Male, age 76, both hemispheres
351.5
2188
Female, age 91, both hemispheres
303.3
Dorsal cochlear nucleus nTPM: 566.2
2370
Male, age 61, both hemispheres
743.3
2802
Male, age 74, right hemisphere
651.9
2378
Male, age 80, both hemispheres
499.9
2058
Male, age 76, both hemispheres
481.7
2187
Female, age 91, both hemispheres
454.4
Dorsal tegmental nucleus nTPM: 635.5
2358
Male, age 61, both hemispheres
716.3
2326
Male, age 74, both hemispheres
620.8
1936
Male, age 76, left hemisphere
607.4
2083
Male, age 80, both hemispheres
597.5
Dorsolateral tegmental area nTPM: 588.0
2360
Male, age 74, both hemispheres
677.9
2141
Male, age 76, both hemispheres
625.9
2654
Male, age 80, both hemispheres
577.1
2751
Female, age 85, both hemispheres
541.4
2337
Male, age 61, both hemispheres
517.6
Kolliker-Fuse nucleus nTPM: 492.6
2315
Male, age 76, right hemisphere
574.2
2163
Male, age 80, both hemispheres
557.3
2793
Female, age 91, left hemisphere
346.5
Lateral lemniscal nuclei nTPM: 429.5
2746
Female, age 85, left hemisphere
584.0
2453
Male, age 74, right hemisphere
486.4
2169
Male, age 76, both hemispheres
433.4
2036
Male, age 80, both hemispheres
350.6
2320
Female, age 91, left hemisphere
292.9
Lateral parabrachial nucleus nTPM: 585.9
2139
Female, age 85, right hemisphere
786.3
2013
Male, age 80, both hemispheres
575.4
2792
Male, age 76, both hemispheres
518.2
2790
Male, age 61, both hemispheres
463.7
Lateral vestibular nucleus nTPM: 582.5
2311
Male, age 80, both hemispheres
588.1
2184
Male, age 76, both hemispheres
576.8
Locus coeruleus nTPM: 620.9
2317
Female, age 72, unknown
777.0
1980
Male, age 76, both hemispheres
697.2
2014
Male, age 55, unknown
678.8
2123
Female, age 91, both hemispheres
601.0
2788
Male, age 74, unknown
576.6
2162
Male, age 80, both hemispheres
566.1
2720
Male, age 74, both hemispheres
449.6
Medial parabrachial nucleus nTPM: 532.7
2156
Male, age 61, both hemispheres
603.4
2786
Male, age 76, both hemispheres
567.3
2854
Male, age 80, both hemispheres
513.8
2170
Female, age 91, both hemispheres
503.6
2463
Female, age 85, right hemisphere
475.5
Medial periolivary nuclei nTPM: 457.2
2791
Male, age 74, right hemisphere
667.4
2171
Female, age 85, both hemispheres
485.4
2063
Male, age 76, both hemispheres
422.1
2458
Female, age 91, both hemispheres
356.4
2081
Male, age 80, both hemispheres
354.5
Motor facial nucleus nTPM: 473.7
2795
Female, age 91, both hemispheres
726.4
2365
Male, age 74, right hemisphere
562.2
2062
Male, age 76, both hemispheres
498.7
2126
Male, age 61, both hemispheres
480.5
2697
Female, age 85, both hemispheres
309.1
2327
Male, age 80, both hemispheres
265.3
Motor trigeminal nucleus nTPM: 438.2
2335
Male, age 61, both hemispheres
639.1
2309
Male, age 76, both hemispheres
473.3
2560
Male, age 74, both hemispheres
398.2
2079
Male, age 80, both hemispheres
350.3
2321
Female, age 91, both hemispheres
330.2
Nuclei of the trapezoid body nTPM: 435.9
2368
Female, age 91, both hemispheres
537.5
1983
Male, age 76, both hemispheres
494.5
2735
Female, age 85, both hemispheres
482.5
2166
Male, age 80, both hemispheres
350.9
2159
Male, age 61, both hemispheres
314.3
Nucleus raphe magnus nTPM: 433.2
2051
Male, age 76, both hemispheres
652.8
2455
Male, age 74, both hemispheres
641.2
2328
Male, age 80, both hemispheres
378.7
2459
Female, age 91, both hemispheres
313.6
2160
Male, age 61, both hemispheres
312.3
2172
Female, age 85, both hemispheres
300.5
Paramedian reticular nucleus nTPM: 472.9
2313
Male, age 61, both hemispheres
582.1
2057
Male, age 80, both hemispheres
533.5
2050
Female, age 85, both hemispheres
433.3
2052
Male, age 76, both hemispheres
342.8
Pedunculopontine tegmental nucleus nTPM: 624.1
1921
Female, age 85, both hemispheres
696.6
2338
Male, age 61, both hemispheres
588.1
2334
Male, age 80, both hemispheres
587.6
Pontine nuclei nTPM: 373.6
1863
Male, age 55, unknown
527.5
1968
Male, age 76, left hemisphere
501.7
2115
Male, age 80, left hemisphere
419.3
2787
Female, age 85, both hemispheres
412.4
2109
Female, age 72, unknown
373.9
2319
Female, age 91, both hemispheres
319.4
2727
Male, age 61, right hemisphere
225.8
2454
Male, age 74, left hemisphere
209.0
Pontine raphe nucleus nTPM: 586.5
2853
Male, age 76, midline
687.2
2122
Female, age 85, midline
485.8
Posteroventral cochlear nucleus nTPM: 477.3
2371
Male, age 61, both hemispheres
771.2
2752
Female, age 85, both hemispheres
527.3
2070
Male, age 76, both hemispheres
510.2
2341
Male, age 80, both hemispheres
320.8
2135
Female, age 91, both hemispheres
256.8
Principal sensory trigeminal nucleus nTPM: 403.0
2324
Male, age 76, both hemispheres
654.0
2158
Male, age 61, both hemispheres
333.7
2008
Male, age 80, left hemisphere
333.2
2367
Female, age 91, left hemisphere
291.1
Reticular pontine nucleus, caudal nTPM: 373.9
2092
Male, age 76, both hemispheres
498.1
2457
Female, age 91, both hemispheres
346.1
2332
Male, age 80, right hemisphere
329.8
2559
Male, age 74, both hemispheres
321.6
Reticular pontine nucleus, oral nTPM: 444.9
1939
Male, age 80, both hemispheres
617.0
2167
Male, age 76, both hemispheres
580.8
2012
Female, age 85, both hemispheres
473.9
2366
Female, age 91, both hemispheres
318.0
2361
Male, age 74, both hemispheres
234.9
Reticulotegmental nucleus nTPM: 524.9
2333
Male, age 80, both hemispheres
604.7
2322
Female, age 91, both hemispheres
551.6
2452
Male, age 74, both hemispheres
494.2
2325
Male, age 76, both hemispheres
448.9
Spinal trigeminal nucleus, oral nTPM: 518.6
1978
Male, age 76, both hemispheres
657.3
2737
Female, age 85, both hemispheres
500.6
2164
Male, age 80, both hemispheres
397.8
Subcoeruleus area nTPM: 520.4
2451
Male, age 74, both hemispheres
589.1
2323
Female, age 91, left hemisphere
572.7
2369
Female, age 85, left hemisphere
519.7
1958
Male, age 80, both hemispheres
509.8
2089
Male, age 76, left hemisphere
410.5
Superior olive nTPM: 420.8
2364
Male, age 74, right hemisphere
621.4
2020
Male, age 76, both hemispheres
404.1
2561
Female, age 91, both hemispheres
398.5
1875
Female, age 85, both hemispheres
350.1
2329
Male, age 80, right hemisphere
329.7
Ventral periolivary nuclei nTPM: 442.7
2130
Female, age 85, both hemispheres
614.0
2165
Male, age 80, both hemispheres
467.5
2023
Male, age 76, both hemispheres
379.9
2794
Female, age 91, left hemisphere
309.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 535.7
2359
Male, age 61, both hemispheres
827.6
2840
Female, age 85, both hemispheres
579.3
2449
Male, age 74, both hemispheres
504.4
2456
Female, age 91, both hemispheres
448.7
1959
Male, age 76, both hemispheres
432.9
2161
Male, age 80, both hemispheres
421.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
460.3
Pig sample
Sample description
nTPM
Pons nTPM: 460.3
Samples: 4
Max nTPM: 816.4
Min nTPM: 295.4
Sample A
Female
816.4
Sample B
Female
295.4
Sample C
Male
347.7
Sample D
Male
381.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
