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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
546.4
nTPM
HPA Brain:
399.3
nTPM
GTEx:
546.4
nTPM
FANTOM5:
1054.9
Scaled Tags Per Million
Pig:
594.5
nTPM
Mouse:
1217.1
nTPM
Allen mouse:
10.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
399.3
Sample id
Sample description
nTPM
Amygdala nTPM: 395.6
2814
Male, age 76, right hemisphere
490.7
2514
Male, age 75, right hemisphere
429.1
1987
Female, age 91, left hemisphere
390.3
2695
Female, age 67, right hemisphere
366.0
2517
Female, age 94, left hemisphere
302.0
Basal amygdala nTPM: 308.8
2609
Male, age 75, right hemisphere
417.5
2110
Male, age 80, left hemisphere
356.3
2243
Female, age 91, right hemisphere
349.1
1955
Male, age 76, both hemispheres
311.2
2685
Female, age 94, left hemisphere
235.3
2827
Female, age 67, right hemisphere
183.7
Central amygdala nTPM: 399.3
2515
Male, age 75, right hemisphere
575.5
2701
Female, age 91, right hemisphere
411.4
1905
Male, age 76, both hemispheres
393.2
2239
Male, age 80, left hemisphere
379.3
2826
Female, age 94, left hemisphere
237.0
Corticomedial amygdala nTPM: 338.2
2428
Male, age 75, right hemisphere
479.5
2829
Male, age 80, left hemisphere
375.2
2242
Female, age 91, right hemisphere
372.8
2429
Female, age 94, left hemisphere
340.8
2240
Male, age 76, both hemispheres
289.9
2535
Female, age 67, right hemisphere
171.1
Lateral amygdala nTPM: 319.9
2516
Male, age 75, right hemisphere
414.4
1883
Male, age 76, both hemispheres
366.1
2255
Female, age 91, right hemisphere
337.6
2256
Male, age 80, left hemisphere
332.9
2830
Female, age 67, right hemisphere
260.0
2534
Female, age 94, left hemisphere
208.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
546.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 546.4
Samples: 152
Max nTPM: 1927.8
Min nTPM: 157.6
Std nTPM: 253.6
Median nTPM: 509.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
1927.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
1348.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1292.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1194.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
1150.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
1089.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
1074.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
988.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
968.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
960.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
948.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
925.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
834.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
833.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
826.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
821.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
818.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
813.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
812.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
807.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
800.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
788.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
774.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
772.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
756.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
749.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
718.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
717.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
716.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
712.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
707.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
689.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
688.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
685.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
684.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
683.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
680.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
678.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
677.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
672.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
655.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
652.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
647.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
644.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
637.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
628.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
627.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
625.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
622.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
618.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
616.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
609.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
570.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
568.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
566.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
565.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
562.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
558.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
557.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
545.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
542.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
540.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
537.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
537.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
536.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
535.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
533.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
532.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
528.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
524.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
522.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
518.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
518.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
516.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
512.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
511.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
507.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
507.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
506.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
505.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
501.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
495.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
492.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
485.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
484.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
482.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
476.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
474.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
472.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
469.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
469.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
463.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
454.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
450.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
449.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
448.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
441.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
439.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
429.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
418.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
411.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
406.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
406.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
406.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
402.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
401.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
397.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
396.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
390.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
388.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
383.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
383.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
377.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
376.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
373.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
362.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
361.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
360.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
357.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
354.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
348.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
337.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
334.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
322.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
321.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
317.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
314.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
309.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
304.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
297.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
292.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
292.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
289.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
282.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
282.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
278.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
276.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
272.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
269.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
263.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
259.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
244.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
243.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
241.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
236.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
227.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
227.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
222.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
219.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
216.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
208.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
157.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1217.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 1217.1
Samples: 4
Max nTPM: 1577.2
Min nTPM: 923.4
Sample A
Male
923.4
Sample B
Male
1126.5
Sample C
Female
1577.2
Sample D
Female
1241.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.