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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AGT is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
15.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
7.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
4.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
3.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
3.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
2.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
2.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
2.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
2.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
1.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
1.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
1.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
1.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
1.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
1.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
1.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
1.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
1.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
1.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AGT is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
66.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
489.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
466.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
369.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
348.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
344.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
340.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
324.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
314.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
310.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
295.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
284.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
265.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
259.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
254.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
253.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
248.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
244.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
233.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
227.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
217.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
215.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
212.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
212.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
211.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
209.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
207.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
200.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
199.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
194.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
189.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
184.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
181.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
179.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
177.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
177.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
171.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
168.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
167.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
166.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
164.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
163.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
161.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
158.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
155.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
154.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
152.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
151.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
149.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
148.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
146.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
142.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
141.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
141.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
139.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
139.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
137.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
132.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
132.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
129.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
128.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
127.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
127.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
124.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
123.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
121.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
121.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
120.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
119.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
119.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
119.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
119.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
118.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
118.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
118.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
117.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
116.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
115.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
114.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
113.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
113.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
113.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
113.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
111.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
111.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
111.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
109.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
108.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
108.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
108.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
108.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
107.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
107.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
107.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
105.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
105.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
104.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
104.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
103.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
103.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
103.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
101.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
101.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
100.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
100.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
100.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
99.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
99.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
99.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
99.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
99.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
98.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
97.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
97.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
97.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
96.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
96.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
96.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
96.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
95.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
95.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
94.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
93.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
93.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
92.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
92.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
92.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
91.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
91.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
90.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
89.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
89.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
89.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
88.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
88.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
87.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
87.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
87.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
86.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
85.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
85.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
85.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
85.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
85.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
85.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
84.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
84.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
83.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
82.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
82.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
81.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
81.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
81.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
81.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
80.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
80.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
80.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
80.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
79.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
77.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
77.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
77.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
76.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
76.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
75.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
75.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
75.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
74.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
74.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
73.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
73.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
73.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
72.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
72.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
72.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
72.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
71.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
71.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
71.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
71.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
70.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
70.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
70.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
69.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
69.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
68.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
68.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
68.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
68.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
68.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
67.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
67.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
66.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
66.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
66.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
66.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
66.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
66.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
65.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
65.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
65.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
65.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
64.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
63.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
63.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
63.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
62.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
61.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
60.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
60.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
60.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
60.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
60.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
60.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
59.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
59.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
59.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
58.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
57.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
57.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
57.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
56.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
55.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
55.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
55.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
55.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
55.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
55.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
55.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
54.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
54.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
53.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
53.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
53.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
53.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
53.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
53.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
52.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
52.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
51.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
51.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
50.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
50.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
50.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
49.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
49.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
49.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
49.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
48.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
48.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
48.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
48.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
48.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
48.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
48.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
47.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
47.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
47.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
47.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
46.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
46.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
46.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
46.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
45.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
45.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
45.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
45.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
45.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
45.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
44.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
44.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
43.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
43.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
43.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
43.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
43.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
42.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
42.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
42.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
42.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
41.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
41.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
41.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
41.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
41.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
41.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
41.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
40.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
40.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
39.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
39.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
39.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
39.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
38.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
38.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
38.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
38.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
38.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
38.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
38.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
38.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
37.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
37.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
37.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
37.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
37.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
37.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
37.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
37.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
36.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
36.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
36.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
36.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
35.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
35.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
35.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
35.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
35.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
35.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
34.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
34.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
34.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
34.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
34.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
34.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
34.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
33.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
33.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
33.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
33.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
33.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
33.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
32.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
32.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
32.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
32.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
32.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
32.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
32.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
31.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
31.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
31.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
31.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
31.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
31.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
31.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
31.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
31.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
31.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
31.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
31.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
30.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
30.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
30.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
30.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
29.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
29.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
29.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
29.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
29.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
29.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
29.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
29.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
28.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
28.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
28.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
28.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
28.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
27.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
27.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
27.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
27.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
27.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
27.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
27.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
26.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
26.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
26.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
25.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
25.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
25.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
24.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
24.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
24.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
24.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
24.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
24.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
24.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
23.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
23.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
23.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
23.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
23.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
22.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
22.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
22.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
22.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
21.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
21.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
21.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
20.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
19.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
19.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
19.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
18.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
18.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
18.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
18.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
18.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
17.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
17.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
17.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
17.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
17.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
17.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
16.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
16.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
16.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
16.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
16.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
15.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
15.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
15.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
15.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
15.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
14.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
13.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
13.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
13.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
12.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
12.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
11.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
11.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
11.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
11.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
10.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
9.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
9.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
9.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
9.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
9.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
8.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
8.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
7.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
6.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
6.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
6.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
5.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
5.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
5.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
5.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
4.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
3.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
3.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
3.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
3.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
2.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
1.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AGT is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
74.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
418.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
342.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
264.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
257.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
257.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
236.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
211.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
207.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
189.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
183.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
179.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
175.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
173.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
167.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
165.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
130.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
127.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
127.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
116.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
116.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
115.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
112.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
98.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
95.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
90.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
87.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
83.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
82.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
81.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
81.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
80.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
78.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
78.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
76.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
74.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
72.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
71.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
69.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
69.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
69.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
65.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
62.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
61.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
60.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
58.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
58.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
57.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
56.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
54.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
52.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
48.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
47.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
46.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
46.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
46.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
45.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
42.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
42.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
42.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
40.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
36.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
36.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
35.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
32.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
27.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
27.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
25.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
24.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
24.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
23.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
22.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
22.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
20.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
19.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
18.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
17.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
16.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
15.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
13.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
13.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
12.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
11.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
11.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
10.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
10.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
9.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
6.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
6.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
4.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
4.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AGT is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
72.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
529.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
440.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
419.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
382.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
353.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
351.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
341.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
281.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
255.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
250.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
245.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
235.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
231.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
219.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
217.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
215.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
208.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
206.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
202.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
201.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
183.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
178.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
166.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
162.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
161.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
160.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
160.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
153.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
149.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
149.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
147.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
146.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
146.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
143.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
143.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
142.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
141.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
141.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
138.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
138.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
130.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
126.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
126.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
125.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
125.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
121.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
121.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
118.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
118.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
118.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
118.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
118.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
117.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
117.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
115.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
115.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
114.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
111.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
108.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
107.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
107.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
105.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
104.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
103.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
102.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
101.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
100.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
99.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
98.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
97.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
97.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
96.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
96.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
95.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
93.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
93.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
91.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
90.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
88.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
88.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
88.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
87.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
86.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
85.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
83.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
82.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
82.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
79.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
78.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
77.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
77.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
75.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
75.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
74.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
73.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
72.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
72.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
72.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
69.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
68.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
68.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
68.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
67.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
67.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
66.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
66.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
66.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
66.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
65.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
64.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
64.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
63.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
63.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
62.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
62.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
62.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
59.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
59.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
58.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
58.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
57.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
57.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
57.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
56.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
56.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
56.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
55.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
54.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
53.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
52.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
51.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
51.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
51.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
50.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
50.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
50.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
50.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
49.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
49.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
49.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
48.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
48.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
48.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
47.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
47.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
47.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
46.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
46.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
46.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
46.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
45.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
45.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
45.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
45.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
45.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
44.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
43.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
42.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
42.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
42.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
42.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
40.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
40.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
39.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
38.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
38.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
38.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
37.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
37.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
36.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
36.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
35.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
35.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
34.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
33.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
33.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
33.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
33.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
33.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
32.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
32.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
32.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
31.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
31.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
31.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
31.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
30.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
30.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
29.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
29.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
29.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
28.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
28.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
28.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
27.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
27.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
27.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
26.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
26.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
26.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
26.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
26.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
26.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
25.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
25.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
25.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
24.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
24.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
24.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
24.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
24.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
24.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
24.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
23.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
23.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
22.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
22.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
20.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
20.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
20.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
19.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
19.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
19.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
17.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
16.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
16.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
16.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
16.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
16.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
15.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
15.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
12.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
12.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
11.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
11.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
10.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
9.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
9.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
9.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
9.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
8.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
7.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
7.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
7.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
7.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
6.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
5.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
5.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
4.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
3.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
3.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
3.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
2.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
2.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
1.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
1.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0063320003
Tumor
1.5
CPT0066480003
Tumor
1.4
CPT0015910003
Tumor
1.3
CPT0076330003
Tumor
1.2
CPT0078510003
Tumor
1.2
CPT0064370003
Tumor
1.1
CPT0025110003
Tumor
1.0
CPT0000640003
Tumor
1.0
CPT0065930003
Tumor
1.0
CPT0007860003
Tumor
0.9
CPT0077310003
Tumor
0.9
CPT0019990003
Tumor
0.9
CPT0081990003
Tumor
0.9
CPT0065750003
Tumor
0.9
CPT0019130003
Tumor
0.9
CPT0012550003
Tumor
0.8
CPT0063630003
Tumor
0.8
CPT0066520001
Normal
0.7
CPT0011240003
Tumor
0.7
CPT0023690003
Tumor
0.7
CPT0075560003
Tumor
0.7
CPT0086030003
Tumor
0.7
CPT0006900003
Tumor
0.6
CPT0026420001
Normal
0.6
CPT0065690003
Tumor
0.6
CPT0079300001
Normal
0.5
CPT0001220008
Tumor
0.5
CPT0012920003
Normal
0.5
CPT0007470001
Normal
0.5
CPT0069190001
Normal
0.5
CPT0012570003
Normal
0.5
CPT0014160003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0001350001
Normal
0.4
CPT0009020003
Normal
0.4
CPT0079510001
Normal
0.4
CPT0075170001
Normal
0.4
CPT0066470004
Tumor
0.4
CPT0088760003
Tumor
0.3
CPT0018250001
Normal
0.3
CPT0079230003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0088780001
Normal
0.3
CPT0076350001
Normal
0.3
CPT0025170003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0020020001
Normal
0.3
CPT0092290003
Tumor
0.3
CPT0012090003
Normal
0.3
CPT0019160001
Normal
0.3
CPT0024680001
Normal
0.3
CPT0092730003
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0084560003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0069010001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0063330001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0088640003
Normal
0.2
CPT0011410003
Tumor
0.2
CPT0092790003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0089480003
Normal
0.1
CPT0088920001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0081880003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0006730001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0092190003
Normal
0.0
CPT0066430001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0082010001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0077140001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0000870016
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0085670003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0075130003
Tumor
-0.1
CPT0064400001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0015730003
Tumor
-0.2
CPT0088570001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0071150004
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0088710001
Normal
-0.2
CPT0089460004
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0086360003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0078530001
Normal
-0.3
CPT0001260009
Tumor
-0.3
CPT0014130001
Normal
-0.3
CPT0088480003
Tumor
-0.3
CPT0025060001
Normal
-0.3
CPT0023360001
Normal
-0.3
CPT0065820001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0012280003
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0092800003
Normal
-0.3
CPT0078830003
Tumor
-0.3
CPT0092160003
Tumor
-0.3
CPT0009000003
Tumor
-0.4
CPT0063640001
Normal
-0.4
CPT0025580004
Tumor
-0.4
CPT0001500009
Tumor
-0.4
CPT0001230001
Normal
-0.4
CPT0010160003
Tumor
-0.5
CPT0014370004
Tumor
-0.5
CPT0025880003
Tumor
-0.5
CPT0025050003
Tumor
-0.5
CPT0001270001
Normal
-0.5
CPT0065430003
Tumor
-0.5
CPT0001340003
Tumor
-0.5
CPT0086870003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0024670003
Tumor
-0.5
CPT0010110003
Tumor
-0.6
CPT0006530001
Normal
-0.6
CPT0079430001
Normal
-0.6
CPT0086820003
Tumor
-0.6
CPT0079180003
Tumor
-0.6
CPT0012670003
Tumor
-0.6
CPT0078800003
Tumor
-0.6
CPT0025610001
Normal
-0.6
CPT0078990003
Tumor
-0.6
CPT0012370003
Tumor
-0.7
CPT0023350003
Tumor
-0.7
CPT0078660003
Tumor
-0.7
CPT0009060003
Tumor
-0.7
CPT0079410003
Tumor
-0.7
CPT0017850003
Tumor
-0.7
CPT0088970003
Tumor
-0.8
CPT0077110003
Tumor
-0.8
CPT0006440003
Tumor
-0.9
CPT0001180009
Tumor
-0.9
CPT0014450004
Tumor
-1.0
CPT0001540009
Tumor
-1.0
CPT0086950003
Tumor
-1.0
CPT0012180003
Tumor
-1.3
CPT0088550004
Tumor
-1.4
CPT0026410003
Tumor
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.