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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AGT is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1349.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
7005.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
5605.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
5167.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
4924.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
4614.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
4268.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
4065.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
3856.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
3715.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
3525.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
3507.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3440.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
3297.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
3296.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3268.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3241.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3238.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3208.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
3163.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
3111.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
2910.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
2896.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
2813.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
2778.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2769.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
2752.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
2692.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
2682.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
2641.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
2588.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
2534.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
2527.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
2479.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
2471.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
2434.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
2395.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
2392.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
2365.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2356.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
2332.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
2323.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2303.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
2272.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2270.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
2262.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2243.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
2242.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
2176.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
2129.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
2127.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
2116.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
2114.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
2105.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
2082.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
2063.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
2046.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
2032.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
2012.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
2011.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
1989.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1986.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1986.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1954.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1942.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1928.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1903.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1892.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1878.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1861.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
1816.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1814.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1810.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
1807.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
1794.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
1775.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1772.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1771.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
1763.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
1736.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1731.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1731.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
1724.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1723.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1722.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1700.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
1698.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1682.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1677.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1665.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1662.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
1649.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
1642.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1631.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
1620.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
1611.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
1597.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
1595.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1593.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1591.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1587.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
1586.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1576.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1572.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
1554.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
1544.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1530.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
1529.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1513.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
1512.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1507.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
1506.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1498.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1493.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1490.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
1487.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
1480.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1467.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
1457.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1453.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1444.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1441.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1435.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1435.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1432.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
1426.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
1417.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
1410.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1407.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1384.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1378.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
1375.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1366.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1364.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
1361.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1350.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1339.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
1336.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1330.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
1329.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1325.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
1316.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
1313.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1306.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1303.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1300.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1287.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1273.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1268.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1267.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1264.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1254.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
1249.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1245.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1242.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1241.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1240.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1234.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1233.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1227.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
1217.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1209.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1202.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1199.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1196.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1190.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1189.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1179.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1177.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1177.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1169.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1168.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
1166.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1166.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1166.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1163.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1163.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1157.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1151.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1148.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
1148.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
1143.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1141.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1140.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1140.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1133.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1132.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1130.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1128.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
1124.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1121.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
1119.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1113.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
1112.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
1109.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1108.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1103.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1103.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
1094.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
1089.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1085.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1077.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1075.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1065.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1060.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1057.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
1048.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1045.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1039.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
1023.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1009.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1009.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1008.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1006.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1003.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1003.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1002.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
999.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
997.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
994.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
994.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
987.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
985.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
985.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
983.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
978.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
974.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
971.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
968.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
960.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
957.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
957.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
951.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
948.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
948.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
946.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
945.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
943.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
935.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
932.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
919.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
913.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
911.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
906.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
905.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
894.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
888.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
888.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
880.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
877.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
871.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
867.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
852.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
850.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
845.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
844.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
842.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
837.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
830.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
823.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
822.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
820.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
814.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
813.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
812.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
808.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
807.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
807.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
806.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
797.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
795.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
792.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
788.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
767.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
761.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
759.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
742.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
735.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
734.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
733.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
733.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
730.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
726.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
725.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
723.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
722.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
720.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
719.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
715.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
712.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
706.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
706.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
692.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
692.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
690.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
686.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
686.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
684.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
683.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
682.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
682.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
672.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
661.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
654.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
644.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
633.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
629.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
623.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
622.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
621.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
618.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
617.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
615.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
608.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
604.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
598.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
593.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
593.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
591.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
591.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
586.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
573.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
550.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
532.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
516.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
509.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
503.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
501.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
496.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
495.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
490.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
483.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
470.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
462.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
458.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
456.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
453.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
444.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
442.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
418.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
416.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
414.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
398.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
398.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
394.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
375.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
366.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
344.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
343.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
335.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
326.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
326.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
312.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
307.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
300.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
293.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
284.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
280.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
278.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
241.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
202.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
30.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AGT is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
818.0
Number of samples
231
Samples
Sample
Description
TPM
DO23524
0 years, female, NA, stage:2, alive, 1050 days
4488.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
3100.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
2512.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
2239.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
2221.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
2200.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
2182.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
2140.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
2083.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
2039.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
2018.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
1925.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
1863.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
1860.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
1820.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
1808.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
1697.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
1671.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
1664.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
1611.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1564.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1539.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
1538.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
1496.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
1489.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
1470.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
1420.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
1418.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
1407.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
1332.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
1284.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
1265.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
1262.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
1242.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
1237.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
1229.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
1204.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
1199.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
1195.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
1191.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
1189.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
1185.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
1181.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
1180.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
1172.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
1168.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
1155.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
1155.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
1129.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1106.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
1102.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
1095.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1094.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
1083.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
1081.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
1077.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
1072.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
1067.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
1067.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
1066.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1057.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
1054.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
1040.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
1035.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
1011.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
1005.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
994.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
983.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
972.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
969.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
956.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
936.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
933.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
918.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
918.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
917.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
917.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
912.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
904.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
901.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
892.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
887.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
865.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
857.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
851.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
849.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
846.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
842.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
835.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
831.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
823.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
815.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
813.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
809.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
806.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
805.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
796.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
789.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
786.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
778.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
772.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
767.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
759.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
758.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
754.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
742.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
735.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
731.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
731.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
719.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
715.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
701.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
685.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
684.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
680.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
669.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
669.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
664.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
659.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
656.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
656.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
654.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
649.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
642.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
639.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
639.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
638.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
637.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
635.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
632.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
622.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
622.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
612.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
607.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
607.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
592.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
587.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
584.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
579.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
574.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
573.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
570.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
570.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
569.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
552.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
552.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
551.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
541.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
540.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
540.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
539.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
539.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
537.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
536.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
536.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
535.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
532.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
517.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
517.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
500.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
497.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
495.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
493.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
483.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
481.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
477.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
476.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
475.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
470.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
466.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
465.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
464.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
458.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
458.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
456.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
456.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
451.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
449.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
446.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
436.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
426.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
422.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
420.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
415.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
414.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
413.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
409.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
409.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
407.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
394.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
393.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
387.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
386.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
373.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
371.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
355.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
355.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
350.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
350.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
345.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
344.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
340.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
324.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
321.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
317.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
313.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
298.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
292.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
280.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
259.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
254.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
245.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
239.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
239.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
236.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
209.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
194.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
193.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
184.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
167.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
145.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
140.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
105.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
48.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
42.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
17.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
7.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
4.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
2.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
1.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
743
Tumor
2.0
877
Tumor
1.6
863
Tumor
1.4
445
Tumor
1.4
343
Tumor
1.3
635
Tumor
1.3
671
Tumor
1.2
367
Tumor
1.1
425
Tumor
1.0
125
Tumor
1.0
393
Tumor
0.9
851
Tumor
0.9
975
Tumor
0.9
636
Normal
0.9
221
Tumor
0.9
227
Tumor
0.8
391
Tumor
0.8
313
Tumor
0.8
387
Tumor
0.7
983
Tumor
0.7
641
Tumor
0.7
331
Tumor
0.7
921
Tumor
0.6
357
Tumor
0.6
527
Tumor
0.6
571
Tumor
0.6
217
Tumor
0.6
697
Tumor
0.6
813
Tumor
0.6
271
Tumor
0.6
1027
Tumor
0.6
573
Tumor
0.6
967
Tumor
0.6
342
Normal
0.5
497
Tumor
0.5
615
Tumor
0.5
664
Normal
0.5
351
Tumor
0.5
881
Tumor
0.5
426
Normal
0.5
567
Tumor
0.5
171
Tumor
0.5
517
Tumor
0.5
471
Tumor
0.5
953
Tumor
0.5
463
Tumor
0.4
777
Tumor
0.4
817
Tumor
0.4
815
Tumor
0.4
523
Tumor
0.4
314
Normal
0.4
363
Tumor
0.4
737
Tumor
0.4
616
Normal
0.4
137
Tumor
0.4
361
Tumor
0.3
267
Tumor
0.3
192
Normal
0.3
368
Normal
0.3
553
Tumor
0.3
298
Normal
0.3
332
Normal
0.3
663
Tumor
0.3
392
Normal
0.3
147
Tumor
0.3
618
Normal
0.3
191
Tumor
0.3
923
Tumor
0.3
396
Normal
0.3
574
Normal
0.3
186
Normal
0.3
744
Normal
0.3
354
Normal
0.3
388
Normal
0.3
278
Normal
0.3
218
Normal
0.3
148
Normal
0.3
375
Tumor
0.3
642
Normal
0.3
564
Normal
0.2
535
Tumor
0.2
394
Normal
0.2
222
Normal
0.2
277
Tumor
0.2
358
Normal
0.2
384
Normal
0.2
422
Normal
0.2
424
Normal
0.2
127
Tumor
0.2
223
Tumor
0.2
568
Normal
0.2
665
Tumor
0.2
414
Normal
0.2
365
Tumor
0.2
617
Tumor
0.2
456
Normal
0.2
172
Normal
0.2
672
Normal
0.2
724
Normal
0.2
515
Tumor
0.2
428
Normal
0.2
447
Tumor
0.2
196
Normal
0.2
723
Tumor
0.2
344
Normal
0.1
452
Normal
0.1
432
Normal
0.1
124
Normal
0.1
224
Normal
0.1
435
Tumor
0.1
951
Tumor
0.1
666
Normal
0.1
111
Normal
0.1
628
Normal
0.1
563
Tumor
0.1
258
Normal
0.1
884
Normal
0.1
352
Normal
0.1
231
Tumor
0.1
446
Normal
0.1
214
Normal
0.1
162
Normal
0.1
257
Tumor
0.1
366
Normal
0.1
883
Tumor
0.1
741
Tumor
0.1
261
Tumor
0.1
727
Tumor
0.1
297
Tumor
0.1
627
Tumor
0.1
968
Normal
0.1
964
Normal
0.1
443
Tumor
0.1
128
Normal
0.1
185
Tumor
0.1
738
Normal
0.1
464
Normal
0.1
436
Normal
0.1
742
Normal
0.1
814
Normal
0.1
195
Tumor
0.1
383
Tumor
0.0
112
Tumor
0.0
557
Tumor
0.0
285
Tumor
0.0
228
Normal
0.0
982
Normal
0.0
376
Normal
0.0
362
Normal
0.0
132
Normal
0.0
545
Tumor
0.0
648
Normal
0.0
286
Normal
0.0
126
Normal
0.0
912
Normal
0.0
353
Tumor
0.0
138
Normal
0.0
444
Normal
0.0
423
Tumor
0.0
536
Normal
0.0
413
Tumor
0.0
455
Tumor
0.0
728
Normal
0.0
451
Tumor
0.0
713
Tumor
0.0
136
Normal
0.0
882
Normal
0.0
466
Normal
0.0
421
Tumor
0.0
135
Tumor
0.0
786
Normal
0.0
1028
Normal
0.0
386
Normal
0.0
662
Normal
0.0
937
Tumor
0.0
468
Normal
0.0
518
Normal
0.0
395
Tumor
0.0
698
Normal
0.0
472
Normal
0.0
1044
Normal
0.0
145
Tumor
0.0
482
Normal
0.0
188
Normal
0.0
462
Normal
0.0
922
Normal
-0.1
866
Normal
-0.1
818
Normal
-0.1
113
Tumor
-0.1
1042
Normal
-0.1
187
Tumor
-0.1
488
Normal
-0.1
1014
Normal
-0.1
327
Tumor
-0.1
433
Tumor
-0.1
528
Normal
-0.1
385
Tumor
-0.1
1013
Tumor
-0.1
785
Tumor
-0.1
914
Normal
-0.1
524
Normal
-0.1
958
Normal
-0.1
465
Tumor
-0.1
956
Normal
-0.1
1026
Normal
-0.1
312
Normal
-0.1
1043
Tumor
-0.1
487
Tumor
-0.1
925
Tumor
-0.1
868
Normal
-0.1
513
Tumor
-0.1
816
Normal
-0.1
494
Normal
-0.1
146
Normal
-0.1
341
Tumor
-0.1
283
Tumor
-0.1
1015
Tumor
-0.1
745
Tumor
-0.1
572
Normal
-0.1
461
Tumor
-0.1
938
Normal
-0.1
232
Normal
-0.1
525
Tumor
-0.1
878
Normal
-0.1
862
Normal
-0.1
746
Normal
-0.1
661
Tumor
-0.1
431
Tumor
-0.1
911
Tumor
-0.1
647
Tumor
-0.2
1045
Tumor
-0.2
434
Normal
-0.2
1022
Normal
-0.2
534
Normal
-0.2
262
Normal
-0.2
448
Normal
-0.2
114
Normal
-0.2
714
Normal
-0.2
213
Tumor
-0.2
1046
Normal
-0.2
778
Normal
-0.2
481
Tumor
-0.2
142
Normal
-0.2
756
Normal
-0.2
514
Normal
-0.2
483
Tumor
-0.2
1025
Tumor
-0.2
1021
Tumor
-0.2
328
Normal
-0.2
526
Normal
-0.2
537
Tumor
-0.2
865
Tumor
-0.2
858
Normal
-0.2
364
Normal
-0.2
284
Normal
-0.2
926
Normal
-0.2
957
Tumor
-0.2
864
Normal
-0.2
356
Normal
-0.2
857
Tumor
-0.2
966
Normal
-0.2
123
Tumor
-0.2
1032
Normal
-0.2
498
Normal
-0.2
268
Normal
-0.3
411
Tumor
-0.3
873
Tumor
-0.3
141
Tumor
-0.3
161
Tumor
-0.3
416
Normal
-0.3
272
Normal
-0.3
474
Normal
-0.3
558
Normal
-0.3
976
Normal
-0.3
963
Tumor
-0.3
978
Normal
-0.3
1016
Normal
-0.3
918
Normal
-0.3
131
Tumor
-0.3
484
Normal
-0.3
412
Normal
-0.3
984
Normal
-0.3
491
Tumor
-0.3
924
Normal
-0.3
954
Normal
-0.3
467
Tumor
-0.3
212
Normal
-0.3
516
Normal
-0.3
952
Normal
-0.3
852
Normal
-0.3
546
Normal
-0.4
716
Normal
-0.4
722
Normal
-0.4
696
Normal
-0.4
944
Normal
-0.4
824
Normal
-0.4
533
Tumor
-0.4
955
Tumor
-0.4
473
Tumor
-0.4
311
Tumor
-0.4
755
Tumor
-0.4
415
Tumor
-0.4
1041
Tumor
-0.4
685
Tumor
-0.5
874
Normal
-0.5
427
Tumor
-0.5
355
Tumor
-0.5
493
Tumor
-0.5
915
Tumor
-0.5
538
Normal
-0.5
943
Tumor
-0.5
554
Normal
-0.5
686
Normal
-0.5
981
Tumor
-0.6
965
Tumor
-0.6
492
Normal
-0.6
1031
Tumor
-0.6
478
Normal
-0.6
977
Tumor
-0.6
695
Tumor
-0.6
916
Normal
-0.6
917
Tumor
-0.6
913
Tumor
-0.7
715
Tumor
-0.7
477
Tumor
-0.7
867
Tumor
-0.7
823
Tumor
-0.7
861
Tumor
-0.7
721
Tumor
-0.9
211
Tumor
-1.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.