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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
194.3
nTPM
HPA Brain:
432.5
nTPM
GTEx:
194.3
nTPM
FANTOM5:
360.2
Scaled Tags Per Million
Pig:
481.6
nTPM
Mouse:
161.9
nTPM
Allen mouse:
3.7
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
432.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 248.6
2828
Female, age 72, unknown
403.8
2586
Male, age 75, left hemisphere
355.4
1827
Male, age 72, unknown
266.7
1833
Male, age 53, unknown
252.2
1870
Female, age 42, unknown
241.9
1830
Male, age 51, unknown
231.5
2411
Female, age 72, unknown
225.8
2219
Male, age 76, both hemispheres
174.0
2666
Male, age 74, left hemisphere
170.4
2019
Male, age 18, unknown
164.4
Dorsal raphe nucleus nTPM: 372.0
2016
Female, age 72, unknown
485.3
2298
Female, age 72, unknown
455.7
2047
Male, age 72, unknown
342.4
1828
Male, age 53, unknown
321.3
2750
Male, age 76, both hemispheres
255.1
Inferior colliculus nTPM: 277.5
1848
Female, age 42, unknown
339.7
2849
Male, age 72, unknown
303.2
2097
Female, age 72, unknown
291.1
1890
Male, age 53, unknown
176.0
Median raphe nucleus nTPM: 241.9
2220
Male, age 76, midline
241.9
Periaquaductal grey, anterior nTPM: 332.5
1795
Male, age 51, unknown
354.4
1947
Male, age 18, unknown
323.1
2502
Female, age 75, unknown
320.0
Periaquaductal grey, dorsal nTPM: 392.3
2850
Male, age 76, both hemispheres
502.0
1840
Male, age 53, unknown
455.7
1831
Male, age 72, unknown
321.7
2464
Female, age 72, unknown
289.9
Periaquaductal grey, lateral nTPM: 432.5
2272
Male, age 74, both hemispheres
448.0
2053
Male, age 18, unknown
439.5
2140
Male, age 76, both hemispheres
409.9
Pretectal area nTPM: 292.4
2273
Male, age 74, both hemispheres
531.6
2825
Male, age 18, unknown
353.4
2224
Female, age 72, unknown
351.4
2667
Female, age 75, unknown
326.4
2407
Male, age 75, both hemispheres
273.7
1817
Female, age 42, unknown
267.8
1815
Male, age 53, unknown
266.1
2316
Male, age 76, right hemisphere
254.9
1944
Female, age 72, unknown
230.3
1816
Male, age 51, unknown
203.5
2007
Male, age 72, unknown
157.8
Red nucleus nTPM: 285.7
1954
Female, age 42, unknown
347.2
2769
Male, age 72, unknown
327.8
1904
Male, age 53, unknown
325.7
1865
Male, age 51, unknown
321.5
2227
Male, age 72, unknown
319.7
2823
Male, age 76, right hemisphere
312.2
2503
Female, age 72, unknown
307.4
2725
Female, age 75, unknown
302.8
1821
Female, age 72, unknown
294.9
2588
Male, age 74, left hemisphere
210.3
2584
Male, age 75, left hemisphere
182.0
2785
Male, age 18, unknown
177.4
Substantia nigra nTPM: 243.0
2699
Male, age 18, unknown
443.5
1916
Female, age 42, unknown
301.0
1851
Male, age 51, unknown
269.3
2590
Female, age 75, unknown
224.7
1889
Female, age 72, unknown
220.0
1941
Male, age 53, unknown
213.2
2409
Female, age 72, unknown
208.4
2583
Male, age 75, right hemisphere
207.2
2241
Male, age 72, unknown
179.7
2665
Male, age 74, both hemispheres
162.9
Superior colliculus nTPM: 288.7
1995
Male, age 72, unknown
477.3
1796
Male, age 53, unknown
320.6
2664
Male, age 75, both hemispheres
306.3
1913
Female, age 42, unknown
305.5
2587
Male, age 74, left hemisphere
269.8
2261
Male, age 18, unknown
268.4
2087
Female, age 72, unknown
262.9
1839
Male, age 51, unknown
251.0
2668
Female, age 75, unknown
238.3
1895
Male, age 76, right hemisphere
186.8
Ventral tegmental area nTPM: 275.6
2021
Male, age 53, unknown
322.3
1942
Male, age 51, unknown
304.9
1915
Female, age 42, unknown
285.4
2410
Female, age 72, unknown
259.5
2223
Female, age 72, unknown
241.2
2218
Male, age 76, both hemispheres
240.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
194.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 194.3
Samples: 139
Max nTPM: 787.8
Min nTPM: 17.9
Std nTPM: 133.7
Median nTPM: 158.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
787.8
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
723.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
690.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
628.8
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
513.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
500.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
456.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
448.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
425.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
403.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
397.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
378.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
376.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
355.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
354.5
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
352.5
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
338.0
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
319.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
309.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
303.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
301.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
289.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
283.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
280.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
277.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
274.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
274.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
270.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
267.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
258.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
256.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
252.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
238.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
234.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
229.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
229.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
228.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
224.9
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
222.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
221.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
216.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
213.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
212.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
210.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
209.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
206.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
202.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
200.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
200.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
199.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
199.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
196.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
194.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
194.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
193.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
192.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
191.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
188.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
187.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
184.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
184.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
183.3
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
180.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
176.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
168.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
166.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
165.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
164.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
163.7
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
158.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
155.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
154.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
154.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
154.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
153.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
151.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
150.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
146.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
143.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
142.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
141.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
140.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
140.9
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
135.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
133.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
131.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
129.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
129.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
129.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
129.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
126.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
123.6
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
123.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
120.5
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
116.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
114.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
114.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
112.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
112.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
112.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
111.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
111.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
110.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
109.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
107.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
107.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
105.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
104.8
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
104.3
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
101.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
100.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
95.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
92.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
90.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
88.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
86.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
84.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
84.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
83.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
82.0
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
81.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
73.0
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
70.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
69.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
69.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
69.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
69.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
69.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
64.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
63.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
62.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
61.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
61.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
61.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
57.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
46.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
33.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
32.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
17.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
161.9
Mouse sample
Sample description
nTPM
Midbrain nTPM: 161.9
Samples: 4
Max nTPM: 181.9
Min nTPM: 141.7
Sample A
Male
181.9
Sample B
Male
141.7
Sample C
Female
156.6
Sample D
Female
167.2
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.