HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:30.3 nTPM
HPA Brain:21.4 nTPM
GTEx:30.3 nTPM
FANTOM5:13.2 Scaled Tags Per Million
Pig:11.1 nTPM
Mouse:16.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051066
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 21.4
Sample id Sample description nTPM
Hippocampus
nTPM: 21.1
1898 Male, age 80, left hemisphere 24.4
2148 Female, age 91, left hemisphere 22.3
1855 Male, age 76, left hemisphere 21.4
2529 Female, age 94, left hemisphere 20.4
1911 Female, age 85, right hemisphere 19.5
2621 Female, age 67, right hemisphere 18.6
Dentate gyrus
nTPM: 20.1
2530 Female, age 94, left hemisphere 21.7
2528 Male, age 74, both hemispheres 21.2
1927 Female, age 91, both hemispheres 21.1
2010 Male, age 76, both hemispheres 19.7
2246 Female, age 85, both hemispheres 18.6
2531 Female, age 67, both hemispheres 18.1
Entorhinal gyrus
nTPM: 17.6
2117 Female, age 91, right hemisphere 20.2
2686 Male, age 75, right hemisphere 18.7
2764 Male, age 80, right hemisphere 18.2
1787 Male, age 76, left hemisphere 16.6
1938 Female, age 85, left hemisphere 16.5
2613 Female, age 94, left hemisphere 15.6
Hippocampus, CA1
nTPM: 20.2
2749 Male, age 80, left hemisphere 22.8
2045 Male, age 76, both hemispheres 21.2
1873 Female, age 85, both hemispheres 20.8
2527 Male, age 74, both hemispheres 20.4
2082 Female, age 91, right hemisphere 15.7
Hippocampus, CA2
nTPM: 20.2
1963 Male, age 80, left hemisphere 23.2
1892 Male, age 76, both hemispheres 22.7
2437 Female, age 94, left hemisphere 20.2
2249 Male, age 74, both hemispheres 20.1
1940 Female, age 85, left hemisphere 17.6
2113 Female, age 91, right hemisphere 17.6
Hippocampus, CA3
nTPM: 21.4
2436 Male, age 74, both hemispheres 26.4
2861 Female, age 67, both hemispheres 21.6
1867 Male, age 76, both hemispheres 21.4
1891 Female, age 85, both hemispheres 20.1
2620 Female, age 94, left hemisphere 19.8
2137 Male, age 80, left hemisphere 18.9
Parahippocampal cortex
nTPM: 17.7
2692 Male, age 74, both hemispheres 18.8
1990 Female, age 91, right hemisphere 18.7
1850 Male, age 80, both hemispheres 18.2
1933 Female, age 85, both hemispheres 18.0
2622 Female, age 67, right hemisphere 18.0
2532 Female, age 72, left hemisphere 17.7
2250 Female, age 67, right hemisphere 17.4
2018 Male, age 76, both hemispheres 17.0
2693 Female, age 94, both hemispheres 17.0
2245 Female, age 91, both hemispheres 16.3
Perirhinal gyrus
nTPM: 17.8
1794 Male, age 80, right hemisphere 19.9
1841 Female, age 85, right hemisphere 18.7
1847 Female, age 91, left hemisphere 17.8
2848 Male, age 76, right hemisphere 16.7
2521 Female, age 94, right hemisphere 15.8
Subiculum
nTPM: 18.6
2729 Female, age 91, right hemisphere 20.9
1977 Female, age 85, both hemispheres 19.6
1901 Male, age 80, both hemispheres 19.4
2619 Male, age 74, both hemispheres 17.6
2438 Female, age 94, left hemisphere 17.3
2042 Male, age 76, both hemispheres 16.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 30.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.3
Samples: 197

Max nTPM: 62.9
Min nTPM: 8.1
Std nTPM: 7.8
Median nTPM: 29.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 62.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 55.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 54.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 53.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 47.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 46.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 46.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 46.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 45.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 45.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 45.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 13.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.2
FF:10169-103B7 60 years, female 15.5
FF:10153-102I9 76 years, female 10.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.1
Pig sample Sample description nTPM
Subiculum
nTPM: 9.1
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.6
Sample A Female 9.9
Sample B Female 8.6
Sample C Male 9.2
Sample D Male 8.8
Dorsal hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 11.4
Min nTPM: 9.2
Sample A Female 11.4
Sample B Female 9.6
Sample C Male 9.7
Sample D Male 9.2
Entorhinal cortex
nTPM: 11.1
Samples: 4

Max nTPM: 11.8
Min nTPM: 9.9
Sample A Female 11.3
Sample B Female 11.3
Sample C Male 11.8
Sample D Male 9.9
Ventral hippocampus
nTPM: 9.5
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.5
Sample A Female 8.5
Sample B Female 9.0
Sample C Male 10.0
Sample D Male 10.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 16.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 19.6
Min nTPM: 11.8
Sample A Male 17.5
Sample B Male 19.6
Sample C Female 16.3
Sample D Female 11.8
Hippocampal formation
nTPM: 14.0
Samples: 4

Max nTPM: 16.2
Min nTPM: 12.1
Sample A Male 16.2
Sample B Male 13.8
Sample C Female 12.1
Sample D Female 13.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
69353687 Antisense, RP_050412_02_E10, Mouse strain C57BL/6J (56 days, male) 0.5

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