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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
260.9
nTPM
GTEx:
260.9
nTPM
FANTOM5:
470.6
Scaled Tags Per Million
Pig:
32.3
nTPM
Mouse:
139.1
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
260.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 260.9
Samples: 105
Max nTPM: 971.7
Min nTPM: 153.1
Std nTPM: 105.8
Median nTPM:
308_1
70 years, female
971.7
495_1
57 years, female
632.3
2_1
77 years, female
626.2
307_1
66 years, female
589.2
41_1
94 years, female
411.9
322_1
76 years, male
399.2
17_1
71 years, male
373.1
4_1
88 years, female
355.8
137_1
83 years, male
353.8
35_1
74 years, female
342.1
375_1
74 years, female
318.5
139_1
64 years, female
314.3
266_1
85 years, male
313.1
18_1
88 years, male
307.0
311_1
78 years, male
303.3
162_1
79 years, female
301.0
384_1
83 years, male
298.6
145_1
84 years, male
293.0
120_1
70 years, female
290.5
119_1
70 years, female
285.4
6_1
73 years, female
285.3
414_1
84 years, female
284.6
117_1
61 years, male
284.0
315_1
62 years, female
282.4
42_1
85 years, male
281.9
218_1
71 years, female
281.6
379_1
60 years, male
279.9
237_1
82 years, male
278.8
89_1
63 years, male
276.9
173_1
67 years, male
273.6
313_1
79 years, female
273.2
43_1
64 years, female
271.2
491_1
89 years, female
270.6
317_1
60 years, male
268.4
389_1
86 years, female
266.4
293_1
68 years, female
265.9
153_1
70 years, female
261.5
415_1
77 years, female
261.3
109_1
81 years, female
258.6
321_1
62 years, female
258.3
319_1
81 years, male
254.2
142_1
61 years, female
251.4
447_1
81 years, male
251.3
347_1
72 years, male
250.8
501_1
88 years, male
250.8
386_1
76 years, male
250.4
404_1
82 years, female
247.2
518_1
75 years, female
244.2
189_1
76 years, male
243.8
99_1
64 years, male
243.1
377_1
82 years, female
242.3
480_1
63 years, male
241.1
526_1
61 years, male
241.1
396_1
62 years, male
240.4
126_1
63 years, male
237.0
490_1
67 years, female
236.7
229_1
69 years, female
233.2
81_1
67 years, male
231.2
413_1
59 years, female
229.7
295_1
61 years, female
228.6
316_1
62 years, male
227.3
246_1
77 years, male
225.5
452_1
88 years, female
225.0
351_1
91 years, male
224.8
324_1
76 years, male
224.4
406_1
79 years, male
222.4
405_1
91 years, male
220.6
335_1
73 years, female
217.2
288_1
66 years, female
216.4
376_1
75 years, female
215.9
177_1
74 years, male
214.6
353_1
82 years, female
213.5
499_1
55 years, female
212.9
314_1
67 years, male
211.7
217_1
76 years, male
211.5
265_1
87 years, male
210.7
348_1
84 years, male
209.3
425_1
59 years, female
208.3
350_1
84 years, female
206.4
264_1
73 years, female
205.5
115_1
83 years, male
205.2
466_1
57 years, female
204.6
9_1
66 years, female
204.1
320_1
89 years, female
204.0
503_1
68 years, male
202.8
354_1
81 years, female
201.9
286_1
68 years, female
201.0
243_1
75 years, male
198.4
254_1
77 years, female
197.8
468_1
89 years, male
192.6
394_1
75 years, female
189.7
506_1
65 years, male
189.0
292_1
71 years, male
187.7
355_1
70 years, female
187.1
356_1
87 years, female
185.2
149_1
88 years, male
183.3
251_1
78 years, male
182.8
349_1
83 years, male
181.3
32_1
67 years, male
180.6
172_1
72 years, female
179.6
352_1
62 years, male
176.1
318_1
68 years, male
169.2
291_1
76 years, male
164.3
163_1
78 years, male
157.1
517_1
88 years, male
153.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.