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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAFD1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
33.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
27.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
24.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
24.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
24.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
22.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
22.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
22.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
19.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
18.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
17.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
17.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
17.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
17.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
17.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
17.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
17.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
16.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
16.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
16.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
16.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
16.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
15.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
15.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
14.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
14.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
13.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
13.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
13.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
12.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
11.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
11.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
11.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
11.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
11.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
10.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
10.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
10.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
10.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
9.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
8.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
6.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAFD1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
92.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
52.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
52.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
50.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
50.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
49.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
47.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
45.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
44.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
42.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
42.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
41.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
41.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
40.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
40.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
39.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
38.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
37.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
37.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
37.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
37.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
37.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
37.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
37.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
36.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
36.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
36.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
36.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
35.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
34.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
34.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
34.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
34.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
33.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
33.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
33.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
33.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
32.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
32.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
32.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
32.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
31.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
31.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
31.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
30.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
30.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
30.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
30.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
30.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
30.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
30.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
30.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
30.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
30.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
30.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
30.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
30.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
29.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
29.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
29.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
29.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
29.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
29.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
29.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
29.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
29.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
29.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
29.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
29.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
29.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
29.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
29.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
29.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
28.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
28.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
28.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
28.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
28.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
28.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
28.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
28.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
27.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
27.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
27.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
27.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
27.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
26.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
26.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
26.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
26.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
26.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
26.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
26.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
26.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
26.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
26.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
26.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
26.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
26.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
26.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
25.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
25.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
25.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
25.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
25.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
25.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
25.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
25.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
25.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
25.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
25.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
25.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
25.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
25.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
25.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
25.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
25.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
25.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
25.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
24.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
24.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
24.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
24.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
24.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
24.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
24.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
24.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
24.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
24.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
24.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
24.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
24.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
24.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
24.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
23.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
23.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
23.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
23.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
23.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
23.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
23.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
23.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
23.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
23.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
23.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
23.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
23.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
23.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
23.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
23.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
23.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
23.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
23.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
23.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
23.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
23.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
23.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
23.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
22.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
22.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
22.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
22.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
22.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
22.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
22.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
22.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
22.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
22.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
22.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
22.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
22.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
22.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
22.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
22.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
22.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
22.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
22.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
22.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
22.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
21.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
21.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
21.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
21.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
21.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
21.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
21.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
21.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
21.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
21.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
21.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
21.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
21.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
21.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
21.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
21.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
21.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
21.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
21.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
20.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
20.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
20.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
20.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
20.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
20.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
20.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
20.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
20.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
20.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
20.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
20.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
20.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
20.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
20.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
20.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
20.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
20.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
20.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
20.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
20.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
20.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
20.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
20.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
20.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
20.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
19.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
19.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
19.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
19.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
19.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
19.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
19.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
19.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
19.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
19.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
19.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
19.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
19.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
19.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
19.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
19.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
19.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
19.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
19.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
19.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
19.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
18.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
18.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
18.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
18.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
18.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
18.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
18.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
18.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
18.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
18.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
18.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
18.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
18.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
18.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
18.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
18.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
18.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
18.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
18.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
18.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
17.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
17.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
17.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
17.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
17.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
17.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
17.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
17.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
17.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
17.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
17.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
17.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
17.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
17.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
17.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
17.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
17.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
17.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
17.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
16.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
16.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
16.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
16.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
16.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
16.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
16.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
16.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
16.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
16.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
16.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
16.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
16.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
16.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
16.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
16.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
16.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
16.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
16.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
16.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
15.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
15.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
15.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
15.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
15.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
15.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
15.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
15.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
15.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
15.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
15.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
15.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
15.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
15.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
15.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
15.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
14.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
14.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
14.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
14.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
14.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
14.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
14.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
14.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
14.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
14.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
14.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
14.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
14.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
14.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
14.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
14.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
14.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
14.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
14.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
14.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
14.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
13.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
13.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
13.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
13.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
13.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
12.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
12.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
12.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
12.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
12.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
12.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
12.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
12.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
12.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
11.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
11.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
11.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
11.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
11.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
11.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
10.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
10.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
9.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
8.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
7.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
6.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAFD1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
57.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
54.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
52.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
50.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
50.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
49.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
45.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
44.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
42.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
41.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
41.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
40.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
40.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
38.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
36.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
35.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
35.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
35.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
34.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
31.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
30.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
30.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
30.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
29.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
29.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
29.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
29.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
28.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
28.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
28.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
28.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
27.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
27.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
27.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
26.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
26.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
25.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
25.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
25.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
25.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
25.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
25.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
25.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
25.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
24.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
23.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
23.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
23.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
22.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
22.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
21.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
21.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
21.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
20.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
20.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
20.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
20.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
20.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
20.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
19.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
19.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
19.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
19.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
19.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
18.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
18.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
18.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
18.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
18.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
18.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
17.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
16.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
16.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
15.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
15.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
14.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
13.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAFD1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
71.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
61.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
50.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
49.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
49.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
45.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
43.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
41.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
40.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
39.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
39.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
39.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
36.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
35.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
34.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
33.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
33.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
32.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
32.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
32.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
30.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
30.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
29.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
29.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
28.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
28.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
28.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
28.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
28.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
28.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
27.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
27.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
27.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
27.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
27.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
26.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
26.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
26.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
26.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
25.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
25.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
25.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
25.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
25.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
24.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
24.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
24.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
24.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
24.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
24.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
23.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
23.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
23.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
23.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
23.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
23.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
23.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
22.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
22.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
22.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
22.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
22.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
22.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
22.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
22.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
22.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
22.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
21.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
21.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
21.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
21.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
21.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
21.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
21.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
21.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
21.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
20.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
20.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
20.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
20.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
20.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
20.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
20.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
20.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
20.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
19.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
19.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
19.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
19.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
19.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
19.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
19.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
19.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
18.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
18.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
18.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
18.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
18.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
18.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
18.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
18.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
18.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
18.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
17.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
17.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
17.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
17.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
17.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
17.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
17.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
17.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
17.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
17.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
17.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
16.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
16.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
16.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
16.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
16.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
16.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
15.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
15.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
15.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
15.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
15.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
15.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
15.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
14.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
14.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
14.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
14.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
14.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
14.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
13.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
13.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
13.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
13.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
13.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
13.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
13.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
13.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
13.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
13.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
13.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
13.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
13.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
12.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
12.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
12.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
12.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
12.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
12.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
12.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
12.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
11.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
11.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
11.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
11.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
11.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
11.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
10.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
10.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
10.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
10.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
9.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
9.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
9.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
9.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
9.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
9.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
9.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
9.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
8.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
8.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
8.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
8.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
7.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
7.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
7.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
6.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
6.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
6.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
1.4
CPT0001180009
Tumor
1.2
CPT0065430003
Tumor
1.1
CPT0078990003
Tumor
1.0
CPT0010110003
Tumor
1.0
CPT0088690003
Tumor
1.0
CPT0023350003
Tumor
0.9
CPT0086360003
Tumor
0.8
CPT0017410003
Tumor
0.8
CPT0007320003
Tumor
0.8
CPT0079410003
Tumor
0.7
CPT0092160003
Tumor
0.7
CPT0012550003
Tumor
0.7
CPT0079380003
Tumor
0.7
CPT0001540009
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0012280003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0065870003
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0088480003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0014370004
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0017850003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0071150004
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0078530001
Normal
0.3
CPT0063630003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0077320001
Normal
0.2
CPT0081600003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0076330003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0078660003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0024670003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0002270011
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0000780007
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0019160001
Normal
-0.2
CPT0025230003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0009000003
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0088760003
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0069160003
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0013790003
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0088640003
Normal
-0.2
CPT0092740003
Normal
-0.3
CPT0064370003
Tumor
-0.3
CPT0006730001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0007860003
Tumor
-0.3
CPT0092310003
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0069190001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0065690003
Tumor
-0.3
CPT0086370003
Normal
-0.3
CPT0015810003
Tumor
-0.3
CPT0081880003
Tumor
-0.3
CPT0066520001
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0009080003
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0010170001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0092790003
Tumor
-0.3
CPT0012090003
Normal
-0.4
CPT0077310003
Tumor
-0.4
CPT0025060001
Normal
-0.4
CPT0089020003
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0065450001
Normal
-0.4
CPT0063320003
Tumor
-0.4
CPT0012770003
Normal
-0.4
CPT0000790001
Normal
-0.5
CPT0065930003
Tumor
-0.5
CPT0023690003
Tumor
-0.5
CPT0012900004
Tumor
-0.5
CPT0089460004
Tumor
-0.5
CPT0078510003
Tumor
-0.5
CPT0086030003
Tumor
-0.6
CPT0066470004
Tumor
-0.6
CPT0021240003
Tumor
-0.7
CPT0065750003
Tumor
-0.7
CPT0014160003
Tumor
-0.7
CPT0075560003
Tumor
-0.7
CPT0001500009
Tumor
-0.8
CPT0024680001
Normal
-0.8
CPT0025290003
Tumor
-0.9
CPT0025170003
Tumor
-0.9
CPT0078930003
Tumor
-1.1
CPT0092290003
Tumor
-1.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
