HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:39.3 nTPM
HPA Brain:59.5 nTPM
GTEx:39.3 nTPM
FANTOM5:31.0 Scaled Tags Per Million
Pig:131.3 nTPM
Mouse:189.6 nTPM
Allen mouse:11.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042789
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 59.5
Sample id Sample description nTPM
Hippocampus
nTPM: 48.8
1898 Male, age 80, left hemisphere 63.4
1855 Male, age 76, left hemisphere 50.6
1911 Female, age 85, right hemisphere 46.1
2148 Female, age 91, left hemisphere 44.6
2529 Female, age 94, left hemisphere 44.5
2621 Female, age 67, right hemisphere 43.6
Dentate gyrus
nTPM: 50.6
1927 Female, age 91, both hemispheres 57.5
2010 Male, age 76, both hemispheres 56.3
2528 Male, age 74, both hemispheres 51.7
2530 Female, age 94, left hemisphere 47.9
2246 Female, age 85, both hemispheres 47.4
2531 Female, age 67, both hemispheres 42.5
Entorhinal gyrus
nTPM: 47.0
1938 Female, age 85, left hemisphere 53.7
2764 Male, age 80, right hemisphere 53.1
1787 Male, age 76, left hemisphere 45.2
2117 Female, age 91, right hemisphere 44.6
2613 Female, age 94, left hemisphere 44.4
2686 Male, age 75, right hemisphere 41.2
Hippocampus, CA1
nTPM: 56.2
2749 Male, age 80, left hemisphere 80.1
2527 Male, age 74, both hemispheres 53.1
1873 Female, age 85, both hemispheres 51.6
2082 Female, age 91, right hemisphere 48.3
2045 Male, age 76, both hemispheres 48.1
Hippocampus, CA2
nTPM: 53.4
1892 Male, age 76, both hemispheres 74.5
1963 Male, age 80, left hemisphere 54.3
2249 Male, age 74, both hemispheres 51.4
2113 Female, age 91, right hemisphere 48.9
2437 Female, age 94, left hemisphere 48.7
1940 Female, age 85, left hemisphere 42.3
Hippocampus, CA3
nTPM: 57.4
2137 Male, age 80, left hemisphere 71.6
1867 Male, age 76, both hemispheres 68.8
2436 Male, age 74, both hemispheres 60.6
2620 Female, age 94, left hemisphere 52.1
1891 Female, age 85, both hemispheres 47.9
2861 Female, age 67, both hemispheres 43.2
Parahippocampal cortex
nTPM: 52.4
1850 Male, age 80, both hemispheres 62.5
1990 Female, age 91, right hemisphere 58.6
2250 Female, age 67, right hemisphere 56.5
2693 Female, age 94, both hemispheres 54.3
1933 Female, age 85, both hemispheres 54.0
2532 Female, age 72, left hemisphere 53.3
2245 Female, age 91, both hemispheres 52.0
2018 Male, age 76, both hemispheres 46.5
2692 Male, age 74, both hemispheres 46.1
2622 Female, age 67, right hemisphere 40.0
Perirhinal gyrus
nTPM: 59.5
1847 Female, age 91, left hemisphere 64.1
1841 Female, age 85, right hemisphere 62.7
1794 Male, age 80, right hemisphere 58.9
2521 Female, age 94, right hemisphere 57.7
2848 Male, age 76, right hemisphere 54.3
Subiculum
nTPM: 49.5
1977 Female, age 85, both hemispheres 56.2
1901 Male, age 80, both hemispheres 55.1
2438 Female, age 94, left hemisphere 48.4
2042 Male, age 76, both hemispheres 47.0
2619 Male, age 74, both hemispheres 47.0
2729 Female, age 91, right hemisphere 43.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 39.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.3
Samples: 197

Max nTPM: 71.1
Min nTPM: 17.1
Std nTPM: 9.5
Median nTPM: 37.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 71.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 64.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 63.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 63.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 61.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 61.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 59.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 59.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 59.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 58.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 58.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 31.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.0
FF:10169-103B7 60 years, female 34.2
FF:10153-102I9 76 years, female 27.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 131.3
Pig sample Sample description nTPM
Subiculum
nTPM: 122.2
Samples: 4

Max nTPM: 161.3
Min nTPM: 98.8
Sample A Female 161.3
Sample B Female 121.6
Sample C Male 107.2
Sample D Male 98.8
Dorsal hippocampus
nTPM: 131.3
Samples: 4

Max nTPM: 156.1
Min nTPM: 96.2
Sample A Female 156.1
Sample B Female 132.3
Sample C Male 140.7
Sample D Male 96.2
Entorhinal cortex
nTPM: 127.9
Samples: 4

Max nTPM: 159.5
Min nTPM: 107.5
Sample A Female 108.1
Sample B Female 159.5
Sample C Male 136.6
Sample D Male 107.5
Ventral hippocampus
nTPM: 123.6
Samples: 4

Max nTPM: 133.4
Min nTPM: 102.5
Sample A Female 129.2
Sample B Female 102.5
Sample C Male 129.2
Sample D Male 133.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 189.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 178.7
Samples: 4

Max nTPM: 185.9
Min nTPM: 174.1
Sample A Male 174.6
Sample B Male 185.9
Sample C Female 174.1
Sample D Female 180.2
Hippocampal formation
nTPM: 189.7
Samples: 4

Max nTPM: 207.5
Min nTPM: 177.9
Sample A Male 185.6
Sample B Male 187.6
Sample C Female 207.5
Sample D Female 177.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.5
67978773 Antisense, RP_040923_01_H03, Mouse strain C57BL/6J (56 days, male) 11.5

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