HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.5 nTPM
HPA Brain:50.0 nTPM
GTEx:22.5 nTPM
FANTOM5:64.6 Scaled Tags Per Million
Pig:31.2 nTPM
Mouse:27.4 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038902Antibody HPA038903
Glial cells Not detectedLow
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 50.0
Sample id Sample description nTPM
Hippocampus
nTPM: 43.4
1855 Male, age 76, left hemisphere 50.9
2148 Female, age 91, left hemisphere 46.7
2529 Female, age 94, left hemisphere 43.4
1898 Male, age 80, left hemisphere 43.0
2621 Female, age 67, right hemisphere 39.5
1911 Female, age 85, right hemisphere 37.0
Dentate gyrus
nTPM: 41.9
1927 Female, age 91, both hemispheres 45.8
2010 Male, age 76, both hemispheres 44.9
2246 Female, age 85, both hemispheres 44.4
2531 Female, age 67, both hemispheres 40.5
2530 Female, age 94, left hemisphere 39.6
2528 Male, age 74, both hemispheres 36.5
Entorhinal gyrus
nTPM: 47.7
1938 Female, age 85, left hemisphere 58.7
2613 Female, age 94, left hemisphere 50.5
2686 Male, age 75, right hemisphere 48.3
1787 Male, age 76, left hemisphere 45.1
2764 Male, age 80, right hemisphere 43.8
2117 Female, age 91, right hemisphere 40.1
Hippocampus, CA1
nTPM: 41.7
1873 Female, age 85, both hemispheres 45.2
2749 Male, age 80, left hemisphere 44.3
2082 Female, age 91, right hemisphere 40.1
2045 Male, age 76, both hemispheres 39.5
2527 Male, age 74, both hemispheres 39.3
Hippocampus, CA2
nTPM: 42.7
1892 Male, age 76, both hemispheres 52.9
1963 Male, age 80, left hemisphere 48.8
1940 Female, age 85, left hemisphere 42.0
2113 Female, age 91, right hemisphere 39.7
2437 Female, age 94, left hemisphere 38.4
2249 Male, age 74, both hemispheres 34.2
Hippocampus, CA3
nTPM: 42.5
2137 Male, age 80, left hemisphere 48.6
2620 Female, age 94, left hemisphere 47.5
1867 Male, age 76, both hemispheres 42.8
1891 Female, age 85, both hemispheres 40.7
2861 Female, age 67, both hemispheres 38.8
2436 Male, age 74, both hemispheres 36.6
Parahippocampal cortex
nTPM: 44.7
1933 Female, age 85, both hemispheres 56.2
1850 Male, age 80, both hemispheres 52.9
2693 Female, age 94, both hemispheres 46.8
2018 Male, age 76, both hemispheres 45.6
2245 Female, age 91, both hemispheres 44.5
2250 Female, age 67, right hemisphere 44.4
1990 Female, age 91, right hemisphere 40.8
2622 Female, age 67, right hemisphere 39.6
2532 Female, age 72, left hemisphere 38.8
2692 Male, age 74, both hemispheres 37.1
Perirhinal gyrus
nTPM: 50.0
1841 Female, age 85, right hemisphere 54.2
1847 Female, age 91, left hemisphere 54.2
2521 Female, age 94, right hemisphere 48.6
1794 Male, age 80, right hemisphere 46.8
2848 Male, age 76, right hemisphere 46.1
Subiculum
nTPM: 40.4
1901 Male, age 80, both hemispheres 52.3
1977 Female, age 85, both hemispheres 44.7
2042 Male, age 76, both hemispheres 42.6
2729 Female, age 91, right hemisphere 36.3
2619 Male, age 74, both hemispheres 35.1
2438 Female, age 94, left hemisphere 31.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 22.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.5
Samples: 197

Max nTPM: 48.6
Min nTPM: 11.8
Std nTPM: 6.1
Median nTPM: 21.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 48.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 40.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 39.8
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 39.3
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 39.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 37.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 37.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 36.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 33.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 32.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 32.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 64.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.6
FF:10169-103B7 60 years, female 65.4
FF:10153-102I9 76 years, female 63.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 31.2
Pig sample Sample description nTPM
Subiculum
nTPM: 28.5
Samples: 4

Max nTPM: 32.6
Min nTPM: 26.7
Sample A Female 32.6
Sample B Female 26.7
Sample C Male 27.1
Sample D Male 27.6
Dorsal hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 36.5
Min nTPM: 24.9
Sample A Female 36.5
Sample B Female 30.4
Sample C Male 33.1
Sample D Male 24.9
Entorhinal cortex
nTPM: 28.9
Samples: 4

Max nTPM: 34.2
Min nTPM: 22.8
Sample A Female 28.4
Sample B Female 34.2
Sample C Male 30.0
Sample D Male 22.8
Ventral hippocampus
nTPM: 29.0
Samples: 4

Max nTPM: 32.7
Min nTPM: 26.2
Sample A Female 32.7
Sample B Female 28.2
Sample C Male 26.2
Sample D Male 28.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 27.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.2
Samples: 4

Max nTPM: 29.3
Min nTPM: 25.9
Sample A Male 26.3
Sample B Male 27.4
Sample C Female 25.9
Sample D Female 29.3
Hippocampal formation
nTPM: 27.4
Samples: 4

Max nTPM: 29.0
Min nTPM: 25.7
Sample A Male 29.0
Sample B Male 28.1
Sample C Female 25.7
Sample D Female 26.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69080527 Antisense, RP_050324_02_C08, Mouse strain C57BL/6J (56 days, male) 0.7

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