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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTGFRN is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
14.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
13.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
10.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
9.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
8.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
7.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
7.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
7.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
6.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
6.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
6.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
5.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
5.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
5.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
5.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
5.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
4.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
4.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
4.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
4.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
4.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
3.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
3.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
3.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
3.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
3.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
3.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
3.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
3.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
3.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
3.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
2.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
2.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
2.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
2.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
1.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
1.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTGFRN is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
105.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
72.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
53.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
49.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
48.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
47.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
45.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
44.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
43.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
43.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
42.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
39.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
39.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
39.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
37.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
37.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
37.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
36.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
36.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
35.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
35.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
35.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
34.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
33.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
33.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
33.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
32.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
32.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
32.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
32.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
32.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
31.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
31.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
30.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
30.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
30.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
30.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
29.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
29.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
29.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
29.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
29.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
29.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
28.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
28.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
28.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
28.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
27.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
27.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
27.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
27.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
26.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
26.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
26.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
26.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
25.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
25.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
25.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
25.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
24.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
24.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
24.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
24.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
24.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
23.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
23.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
23.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
23.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
23.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
23.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
23.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
23.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
23.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
22.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
22.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
22.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
22.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
22.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
21.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
21.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
21.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
21.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
21.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
20.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
20.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
20.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
20.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
20.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
20.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
20.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
20.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
20.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
19.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
19.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
19.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
19.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
19.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
19.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
19.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
18.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
18.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
18.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
18.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
18.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
18.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
18.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
17.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
17.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
17.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
17.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
17.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
17.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
17.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
17.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
17.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
16.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
16.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
16.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
16.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
16.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
16.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
16.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
16.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
16.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
16.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
15.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
15.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
15.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
15.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
15.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
15.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
15.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
15.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
15.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
15.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
15.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
15.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
15.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
15.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
14.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
14.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
14.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
14.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
14.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
14.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
14.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
14.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
13.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
13.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
13.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
13.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
13.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
12.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
12.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
12.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
12.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
12.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
12.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
12.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
12.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
11.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
11.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
11.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
11.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
11.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
11.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
11.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
11.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
11.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
11.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
11.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
11.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
10.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
10.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
10.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
10.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
10.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
10.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
10.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
10.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
10.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
10.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
9.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
9.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
9.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
9.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
9.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
9.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
9.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
9.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
9.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
9.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
9.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
9.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
9.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
9.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
8.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
8.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
8.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
8.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
8.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
8.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
8.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
8.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
8.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
8.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
7.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
7.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
7.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
7.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
7.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
7.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
7.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
7.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
7.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
7.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
7.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
7.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
7.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
7.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
7.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
7.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
7.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
7.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
7.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
7.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
6.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
6.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
6.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
6.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
6.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
6.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
6.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
6.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
6.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
6.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
6.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
6.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
6.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
6.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
6.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
6.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
6.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
6.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
6.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
6.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
6.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
6.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
6.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
6.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
6.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
6.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
6.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
5.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
5.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
5.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
5.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
5.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
5.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
5.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
5.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
5.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
5.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
5.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
5.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
5.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
5.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
5.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
5.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
5.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
5.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
5.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
5.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
5.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
5.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
5.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
4.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
4.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
4.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
4.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
4.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
4.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
4.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
4.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
4.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
4.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
4.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
4.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
4.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
4.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
4.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
4.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
4.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
4.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
4.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
4.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
3.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
3.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
3.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
3.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
3.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
3.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
3.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
3.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
3.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
3.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
3.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
3.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
3.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
3.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
3.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
3.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
3.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
2.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
2.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
2.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
2.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
2.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
2.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
2.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
2.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
2.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
2.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
2.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
2.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
2.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
2.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
2.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
2.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
2.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
2.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
2.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
2.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
2.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
2.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
2.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
2.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
2.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
2.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
2.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
2.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
2.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
2.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
2.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
2.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
1.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
1.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
1.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
1.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
1.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
1.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
1.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
1.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
1.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
1.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
1.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
1.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
1.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
1.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
1.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
1.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
0.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTGFRN is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
67.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
50.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
43.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
36.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
36.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
35.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
34.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
34.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
34.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
32.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
32.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
31.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
30.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
30.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
30.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
30.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
29.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
28.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
27.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
25.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
24.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
24.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
24.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
22.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
21.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
20.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
20.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
18.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
17.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
17.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
17.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
16.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
15.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
15.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
14.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
13.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
13.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
12.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
11.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
10.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
10.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
10.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
9.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
9.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
8.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
8.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
8.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
7.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
7.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
7.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
7.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
6.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
6.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
6.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
5.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
5.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
5.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
5.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
5.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
4.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
4.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
4.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
3.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
3.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
3.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
3.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
3.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
3.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
3.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
2.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
2.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
2.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
2.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
2.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
1.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
1.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
0.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
0.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
0.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTGFRN is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
124.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
92.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
91.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
80.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
69.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
64.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
63.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
63.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
62.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
62.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
62.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
61.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
57.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
56.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
55.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
55.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
54.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
54.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
54.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
53.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
53.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
52.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
52.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
52.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
51.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
51.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
51.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
51.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
51.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
50.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
50.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
49.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
49.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
49.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
49.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
46.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
45.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
44.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
44.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
44.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
43.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
42.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
42.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
41.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
40.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
40.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
40.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
40.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
40.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
40.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
39.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
39.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
38.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
38.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
38.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
38.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
37.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
37.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
36.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
36.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
36.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
36.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
35.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
35.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
35.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
35.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
35.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
34.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
34.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
33.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
33.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
32.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
32.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
32.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
32.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
31.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
31.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
31.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
31.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
30.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
30.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
30.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
30.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
29.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
29.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
29.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
29.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
29.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
29.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
28.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
28.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
28.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
28.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
28.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
28.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
28.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
28.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
27.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
27.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
27.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
27.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
26.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
26.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
26.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
26.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
25.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
25.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
25.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
25.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
25.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
24.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
24.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
24.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
24.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
23.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
23.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
23.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
22.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
22.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
22.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
21.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
21.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
20.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
20.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
20.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
20.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
20.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
20.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
19.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
19.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
19.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
19.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
19.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
19.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
19.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
18.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
18.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
18.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
18.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
18.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
18.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
18.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
17.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
17.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
17.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
17.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
16.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
16.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
16.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
16.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
16.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
16.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
15.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
15.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
15.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
15.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
15.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
15.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
15.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
15.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
15.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
15.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
14.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
14.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
14.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
14.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
14.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
14.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
14.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
14.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
14.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
13.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
13.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
13.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
13.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
13.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
12.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
12.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
12.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
12.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
12.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
12.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
11.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
11.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
11.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
11.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
10.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
10.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
10.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
10.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
10.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
10.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
9.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
9.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
8.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
8.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
8.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
7.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
6.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
6.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
6.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
6.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
6.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
4.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
4.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
3.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
2.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
1.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
2.8
CPT0011410003
Tumor
2.6
CPT0078800003
Tumor
1.5
CPT0014450004
Tumor
1.1
CPT0025050003
Tumor
0.9
CPT0025880003
Tumor
0.9
CPT0017850003
Tumor
0.8
CPT0088480003
Tumor
0.8
CPT0069000003
Tumor
0.8
CPT0086950003
Tumor
0.7
CPT0023350003
Tumor
0.7
CPT0089020003
Tumor
0.7
CPT0088550004
Tumor
0.7
CPT0019130003
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0077320001
Normal
0.6
CPT0012280003
Tumor
0.6
CPT0077310003
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0084560003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0081880003
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0001510001
Normal
0.3
CPT0012370003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0014160003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0001500009
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0078510003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0025580004
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0088640003
Normal
0.1
CPT0066480003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0086830003
Normal
0.0
CPT0020130001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0077140001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0088710001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0001340003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0079270003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0075130003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0086360003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0089480003
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0025350003
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0088780001
Normal
-0.2
CPT0065820001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0084590001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0023690003
Tumor
-0.3
CPT0012770003
Normal
-0.3
CPT0012080003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0012290003
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0088760003
Tumor
-0.3
CPT0075560003
Tumor
-0.3
CPT0082010001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0007320003
Tumor
-0.3
CPT0007870001
Normal
-0.3
CPT0063320003
Tumor
-0.3
CPT0064400001
Normal
-0.3
CPT0078660003
Tumor
-0.3
CPT0018250001
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0089040001
Normal
-0.4
CPT0006730001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0013790003
Normal
-0.4
CPT0026420001
Normal
-0.4
CPT0001270001
Normal
-0.4
CPT0019990003
Tumor
-0.4
CPT0019160001
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0088630003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0076350001
Normal
-0.4
CPT0009080003
Normal
-0.5
CPT0079000001
Normal
-0.5
CPT0014350001
Normal
-0.5
CPT0092800003
Normal
-0.5
CPT0065690003
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0088920001
Normal
-0.5
CPT0089460004
Tumor
-0.5
CPT0065450001
Normal
-0.5
CPT0075570001
Normal
-0.5
CPT0086970003
Normal
-0.5
CPT0011240003
Tumor
-0.5
CPT0086820003
Tumor
-0.5
CPT0012670003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0078530001
Normal
-0.6
CPT0065870003
Tumor
-0.6
CPT0081600003
Tumor
-0.6
CPT0085670003
Tumor
-0.6
CPT0087050003
Normal
-0.6
CPT0024680001
Normal
-0.6
CPT0007860003
Tumor
-0.6
CPT0015730003
Tumor
-0.6
CPT0025110003
Tumor
-0.6
CPT0064370003
Tumor
-0.6
CPT0006440003
Tumor
-0.6
CPT0020120003
Tumor
-0.7
CPT0017410003
Tumor
-0.7
CPT0001260009
Tumor
-0.7
CPT0078990003
Tumor
-0.7
CPT0076330003
Tumor
-0.7
CPT0006630003
Tumor
-0.7
CPT0079180003
Tumor
-0.7
CPT0066470004
Tumor
-0.8
CPT0069160003
Tumor
-0.8
CPT0079480003
Tumor
-0.9
CPT0092160003
Tumor
-1.0
CPT0012900004
Tumor
-1.0
CPT0065810003
Tumor
-1.0
CPT0012550003
Tumor
-1.1
CPT0000870016
Tumor
-1.1
CPT0012180003
Tumor
-1.2
CPT0026410003
Tumor
-1.2
CPT0078830003
Tumor
-1.3
CPT0086870003
Tumor
-1.3
CPT0014370004
Tumor
-1.3
CPT0001540009
Tumor
-1.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.