Expression of GSTM1 in head and neck cancer

HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

GSTM1 is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 44.73

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

90.5

Number of samples

492

Samples

Sample	Description	TPM
TCGA-CQ-5324-01A	0 years, male, white, stage:Stage III, alive, 1593 days	2515.7
TCGA-CV-7177-01A	0 years, female, white, stage:Stage II, dead, 663 days	1818.7
TCGA-CV-6951-01A	0 years, male, white, stage:Stage IVA, dead, 915 days	1672.7
TCGA-CV-7263-01A	0 years, male, black or african american, stage:Stage II, dead, 560 days	1643.2
TCGA-CV-7437-01A	0 years, male, stage:Stage II, dead, 506 days	1625.8
TCGA-BB-8601-01A	0 years, male, black or african american, stage:Stage III, alive, 624 days	1624.5
TCGA-QK-A8ZA-01A	0 years, male, black or african american, stage:'--, dead, 371 days	1484.3
TCGA-UF-A71E-01A	0 years, male, white, stage:Stage IVA, dead, 1504 days	1370.1
TCGA-CV-7418-01A	0 years, male, black or african american, stage:Stage IVA, dead, 789 days	1156.3
TCGA-CV-5978-01A	0 years, female, black or african american, stage:Stage IVB, dead, 215 days	1138.8
TCGA-QK-A6VB-01A	0 years, male, white, stage:Stage IVA, alive, 641 days	990.4
TCGA-CV-5434-01A	0 years, male, black or african american, stage:Stage IVA, dead, 3314 days	853.5
TCGA-CV-7424-01A	0 years, male, asian, stage:Stage IVA, dead, 453 days	724.5
TCGA-F7-7848-01A	0 years, male, white, stage:Stage IVA, alive, 1131 days	701.1
TCGA-CV-7254-01A	0 years, male, white, stage:Stage II, dead, 1459 days	694.5
TCGA-UF-A71B-01A	0 years, male, white, stage:Stage IVA, alive, 1506 days	683.9
TCGA-QK-A8Z8-01A	0 years, female, black or african american, stage:Stage IVC, dead, 171 days	682.5
TCGA-CV-6955-01A	0 years, female, white, stage:Stage II, dead, 334 days	658.1
TCGA-CQ-6228-01A	0 years, female, white, stage:Stage IVA, dead, 456 days	657.4
TCGA-CN-6024-01A	0 years, male, white, stage:Stage IVA, dead, 337 days	644.4
TCGA-CV-7253-01A	0 years, male, black or african american, stage:Stage IVA, dead, 361 days	619.0
TCGA-BA-4078-01A	0 years, male, white, stage:'--, dead, 276 days	617.9
TCGA-P3-A5QF-01A	0 years, male, white, stage:Stage IVA, dead, 330 days	613.2
TCGA-CV-7248-01A	0 years, female, black or african american, stage:Stage IVA, dead, 521 days	612.2
TCGA-CN-5359-01A	0 years, male, white, stage:Stage IVA, dead, 377 days	555.9
TCGA-CN-6989-01A	0 years, male, white, stage:Stage IVA, dead, 980 days	542.1
TCGA-CN-6997-01A	0 years, male, white, stage:Stage IVA, dead, 988 days	492.7
TCGA-UF-A7JF-01A	0 years, male, white, stage:Stage IVA, alive, 1686 days	473.5
TCGA-P3-A6SW-01A	0 years, male, white, stage:Stage IVB, alive, 1120 days	426.0
TCGA-CR-7389-01A	0 years, male, black or african american, stage:'--, alive, 392 days	424.2
TCGA-H7-7774-01A	0 years, female, white, stage:Stage IVA, alive, 407 days	405.1
TCGA-CV-7099-01A	0 years, female, white, stage:Stage II, dead, 243 days	402.7
TCGA-BA-6870-01A	0 years, female, black or african american, stage:'--, dead, 451 days	363.8
TCGA-CQ-7065-01A	0 years, male, asian, stage:Stage II, alive, 1628 days	334.7
TCGA-CV-7568-01A	0 years, female, white, stage:Stage IVA, dead, 927 days	331.9
TCGA-CV-A6JU-01A	0 years, female, white, stage:Stage IVB, alive, 110 days	329.1
TCGA-D6-A4ZB-01A	0 years, male, white, stage:Stage III, alive, 376 days	303.5
TCGA-MT-A67A-01A	0 years, female, white, stage:Stage I, alive, 914 days	300.7
TCGA-T2-A6X0-01A	0 years, male, white, stage:'--, alive, 216 days	298.5
TCGA-BA-A6D8-01A	0 years, male, black or african american, stage:Stage IVA, alive, 850 days	297.3
TCGA-CR-6491-01A	0 years, male, black or african american, stage:Stage IVA, alive, 693 days	287.5
TCGA-CV-7416-01A	0 years, female, white, stage:Stage IVA, dead, 763 days	286.7
TCGA-P3-A5Q5-01A	0 years, male, white, stage:Stage IVA, alive, 910 days	267.5
TCGA-CR-5249-01A	0 years, female, white, stage:Stage II, alive, 1152 days	253.2
TCGA-QK-AA3J-01A	0 years, male, black or african american, stage:Stage I, alive, 466 days	243.3
TCGA-D6-A74Q-01A	0 years, male, white, stage:Stage IVA, alive, 710 days	240.2
TCGA-CV-A45Z-01A	0 years, male, white, stage:'--, dead, 1466 days	229.4
TCGA-QK-A8Z7-01A	0 years, male, black or african american, stage:Stage IVA, alive, 392 days	218.1
TCGA-CV-7421-01A	0 years, male, white, stage:Stage IVA, dead, 2 days	216.5
TCGA-CV-7095-01A	0 years, female, stage:Stage II, dead, 572 days	192.5
TCGA-QK-A6IJ-01A	0 years, male, white, stage:Stage III, alive, 387 days	185.7
TCGA-BA-6872-01A	0 years, male, white, stage:'--, dead, 384 days	180.4
TCGA-BA-6869-01A	0 years, male, white, stage:Stage III, alive, 644 days	177.4
TCGA-CV-A45R-01A	0 years, male, white, stage:Stage III, alive, 5480 days	176.7
TCGA-T3-A92M-01A	0 years, male, black or african american, stage:Stage IVA, alive, 417 days	169.3
TCGA-CV-5441-01A	0 years, male, white, stage:Stage IVA, alive, 2886 days	167.2
TCGA-CV-7435-01A	0 years, female, white, stage:Stage IVA, dead, 4680 days	160.4
TCGA-CV-A6JY-01A	0 years, male, white, stage:Stage IVA, alive, 646 days	151.5
TCGA-MT-A7BN-01A	0 years, male, white, stage:Stage IVA, alive, 469 days	150.3
TCGA-CQ-A4C9-01A	0 years, male, stage:Stage III, alive, 707 days	143.8
TCGA-QK-A8ZB-01A	0 years, male, black or african american, stage:Stage IVA, alive, 542 days	143.5
TCGA-CN-4739-01A	0 years, male, white, stage:Stage IVA, dead, 1394 days	141.1
TCGA-UP-A6WW-01A	0 years, male, white, stage:'--, alive, 518 days	140.4
TCGA-CV-5436-01A	0 years, male, stage:Stage IVA, dead, 584 days	137.0
TCGA-CR-7369-01A	0 years, male, white, stage:Stage IVA, dead, 1090 days	136.0
TCGA-CR-5248-01A	0 years, male, white, stage:'--, alive, 1663 days	135.7
TCGA-CR-5247-01A	0 years, male, black or african american, stage:'--, alive, 358 days	134.5
TCGA-UF-A7JH-01A	0 years, male, black or african american, stage:Stage IVA, alive, 896 days	130.9
TCGA-DQ-5630-01A	0 years, male, white, stage:'--, alive, 1030 days	130.5
TCGA-CR-7368-01A	0 years, male, white, stage:Stage IVA, alive, 1245 days	128.1
TCGA-CV-6945-01A	0 years, male, white, stage:Stage IVA, dead, 366 days	127.8
TCGA-CV-7413-01A	0 years, female, white, stage:Stage II, dead, 294 days	125.4
TCGA-CV-A461-01A	0 years, male, white, stage:'--, dead, 2064 days	124.3
TCGA-CV-7428-01A	0 years, male, white, stage:Stage IVA, dead, 1671 days	115.4
TCGA-CV-6960-01A	0 years, male, black or african american, stage:Stage III, dead, 862 days	115.0
TCGA-CN-A641-01A	0 years, male, white, stage:Stage IVA, alive, 367 days	102.9
TCGA-BB-4225-01A	0 years, male, white, stage:'--, alive, 146 days	101.5
TCGA-CQ-6227-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	95.1
TCGA-UF-A7JK-01A	0 years, male, stage:Stage IVA, dead, 424 days	92.5
TCGA-CR-7401-01A	0 years, male, white, stage:Stage I, alive, 1077 days	89.5
TCGA-CR-7386-01A	0 years, male, white, stage:Stage IVA, alive, 1430 days	87.9
TCGA-CR-6481-01A	0 years, male, white, stage:'--, alive, 311 days	87.4
TCGA-CR-6488-01A	0 years, female, white, stage:Stage II, alive, 379 days	87.3
TCGA-CR-6484-01A	0 years, female, asian, stage:Stage IVA, alive, 354 days	86.1
TCGA-WA-A7GZ-01A	0 years, male, white, stage:'--, dead, 625 days	85.8
TCGA-CN-4725-01A	0 years, male, white, stage:Stage II, alive, 1157 days	82.1
TCGA-CR-7371-01A	0 years, female, white, stage:Stage III, dead, 94 days	81.0
TCGA-CN-A642-01A	0 years, male, white, stage:Stage IVB, dead, 82 days	80.0
TCGA-CN-A63U-01A	0 years, male, white, stage:Stage IVA, alive, 964 days	78.1
TCGA-UF-A7JD-01A	0 years, male, stage:Stage IVA, dead, 739 days	77.1
TCGA-P3-A6T4-01A	0 years, male, white, stage:Stage IVA, dead, 62 days	76.8
TCGA-CV-7183-01A	0 years, male, white, stage:Stage II, alive, 3981 days	76.1
TCGA-CV-6441-01A	0 years, male, white, stage:Stage III, dead, 292 days	76.1
TCGA-CV-A464-01A	0 years, male, white, stage:Stage III, alive, 1722 days	75.1
TCGA-TN-A7HL-01A	0 years, male, white, stage:Stage IVA, alive, 619 days	73.9
TCGA-IQ-7632-01A	0 years, female, white, stage:Stage IVA, alive, 441 days	73.8
TCGA-CR-7391-01A	0 years, female, white, stage:Stage I, alive, 913 days	73.6
TCGA-BA-5556-01A	0 years, female, white, stage:Stage II, alive, 725 days	73.0
TCGA-D6-A4Z9-01A	0 years, male, white, stage:Stage IVA, alive, 539 days	71.6
TCGA-CV-6934-01A	0 years, female, white, stage:Stage IVA, dead, 65 days	69.9
TCGA-CV-6433-01A	0 years, male, white, stage:Stage II, alive, 641 days	69.6
TCGA-CN-4742-01A	0 years, female, white, stage:Stage IVA, dead, 397 days	66.3
TCGA-F7-8298-01A	0 years, male, white, stage:Stage I, alive, 995 days	65.0
TCGA-KU-A6H7-01A	0 years, female, white, stage:Stage IVA, alive, 586 days	62.7
TCGA-CR-6487-01A	0 years, male, white, stage:Stage I, alive, 234 days	62.6
TCGA-D6-6823-01A	0 years, male, white, stage:Stage II, alive, 701 days	61.3
TCGA-CR-6467-01A	0 years, male, white, stage:Stage III, alive, 1777 days	61.3
TCGA-F7-A622-01A	0 years, male, white, stage:Stage III, dead, 359 days	60.8
TCGA-CQ-5323-01A	0 years, male, white, stage:Stage I, alive, 1466 days	59.2
TCGA-CV-6939-01A	0 years, male, white, stage:Stage IVA, dead, 666 days	59.0
TCGA-CV-7252-01A	0 years, female, black or african american, stage:Stage IVA, dead, 151 days	58.9
TCGA-CQ-6229-01A	0 years, male, white, stage:Stage II, alive, 1179 days	58.2
TCGA-T2-A6WZ-01A	0 years, male, white, stage:'--, dead, 484 days	57.5
TCGA-CQ-6221-01A	0 years, male, white, stage:'--, alive, 1000 days	56.2
TCGA-CQ-A4C6-01A	0 years, male, asian, stage:Stage II, alive, 1353 days	55.5
TCGA-QK-A6VC-01A	0 years, female, black or african american, stage:Stage IVA, alive, 600 days	54.9
TCGA-CQ-6222-01A	0 years, male, white, stage:Stage IVA, alive, 2016 days	54.8
TCGA-CR-6470-01A	0 years, male, white, stage:Stage II, alive, 1521 days	52.9
TCGA-RS-A6TP-01A	0 years, male, white, stage:Stage II, alive, 516 days	52.4
TCGA-CN-A6V6-01A	0 years, male, white, stage:Stage IVA, alive, 635 days	51.8
TCGA-CV-7440-01A	0 years, male, white, stage:Stage II, dead, 675 days	51.8
TCGA-BA-4074-01A	0 years, male, white, stage:Stage IVA, dead, 462 days	51.7
TCGA-BA-A6DE-01A	0 years, female, white, stage:Stage II, alive, 440 days	51.3
TCGA-CN-4726-01A	0 years, male, white, stage:Stage IVA, dead, 142 days	50.6
TCGA-CQ-5333-01A	0 years, male, white, stage:Stage II, dead, 341 days	49.6
TCGA-HD-A634-01A	0 years, male, white, stage:Stage IVA, dead, 130 days	49.4
TCGA-UF-A7JC-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	49.3
TCGA-BA-A6DD-01A	0 years, male, black or african american, stage:Stage IVA, dead, 173 days	49.3
TCGA-DQ-7592-01A	0 years, male, american indian or alaska native, stage:'--, alive, 1143 days	49.2
TCGA-QK-AA3K-01A	0 years, male, black or african american, stage:Stage IVA, alive, 253 days	49.2
TCGA-CR-6480-01A	0 years, male, white, stage:'--, alive, 362 days	48.7
TCGA-CR-7394-01A	0 years, male, white, stage:Stage IVA, alive, 1346 days	47.9
TCGA-TN-A7HI-01A	0 years, male, white, stage:Stage IVA, alive, 412 days	47.8
TCGA-CV-A465-01A	0 years, male, white, stage:Stage III, dead, 215 days	47.5
TCGA-HD-A4C1-01A	0 years, female, black or african american, stage:Stage IVA, alive, 11 days	47.3
TCGA-F7-A50J-01A	0 years, female, white, stage:Stage III, alive, 947 days	46.9
TCGA-CN-A497-01A	0 years, male, stage:Stage III, alive, 1065 days	45.9
TCGA-BA-6871-01A	0 years, male, white, stage:'--, dead, 108 days	45.9
TCGA-CN-6020-01A	0 years, male, black or african american, stage:Stage III, dead, 205 days	45.9
TCGA-T2-A6WX-01A	0 years, female, white, stage:'--, dead, 209 days	45.3
TCGA-CN-A499-01A	0 years, female, white, stage:Stage II, alive, 717 days	44.1
TCGA-CV-5443-01A	0 years, male, black or african american, stage:Stage III, alive, 2784 days	43.5
TCGA-DQ-5624-01A	0 years, female, white, stage:'--, alive, 1778 days	42.6
TCGA-DQ-5631-01A	0 years, male, white, stage:'--, dead, 548 days	42.4
TCGA-F7-A50I-01A	0 years, male, white, stage:Stage IVA, alive, 92 days	42.3
TCGA-MT-A67D-01A	0 years, male, white, stage:Stage II, alive, 56 days	42.2
TCGA-CR-7398-01A	0 years, female, white, stage:Stage II, alive, 156 days	41.6
TCGA-CQ-5327-01A	0 years, female, asian, stage:Stage IVA, alive, 1660 days	41.0
TCGA-CR-7393-01A	0 years, male, white, stage:Stage III, alive, 993 days	39.8
TCGA-CR-6478-01A	0 years, female, white, stage:'--, dead, 183 days	39.3
TCGA-CN-A49A-01A	0 years, male, white, stage:Stage IVB, dead, 526 days	39.0
TCGA-CN-5366-01A	0 years, male, white, stage:Stage IVA, dead, 360 days	38.7
TCGA-CR-7382-01A	0 years, male, white, stage:Stage IVA, alive, 796 days	37.7
TCGA-D6-8569-01A	0 years, male, white, stage:Stage II, alive, 770 days	36.9
TCGA-CN-4722-01A	0 years, female, white, stage:Stage II, alive, 1483 days	36.5
TCGA-IQ-A61J-01A	0 years, male, white, stage:Stage IVA, alive, 1021 days	36.4
TCGA-CQ-5329-01A	0 years, female, white, stage:Stage II, alive, 2143 days	36.3
TCGA-CQ-6223-01A	0 years, male, white, stage:Stage II, alive, 1428 days	36.1
TCGA-D6-A6EQ-01A	0 years, male, white, stage:Stage IVA, alive, 368 days	36.0
TCGA-UF-A71D-01A	0 years, female, white, stage:Stage IVA, alive, 1461 days	35.6
TCGA-CV-7255-01A	0 years, female, white, stage:Stage IVA, dead, 64 days	34.6
TCGA-BB-4217-01A	0 years, male, black or african american, stage:Stage IVA, alive, 187 days	34.5
TCGA-CQ-A4CE-01A	0 years, female, stage:Stage II, alive, 897 days	34.3
TCGA-CV-A468-01A	0 years, male, stage:Stage IVA, dead, 464 days	34.2
TCGA-CQ-7063-01A	0 years, female, white, stage:Stage I, alive, 2133 days	33.6
TCGA-D6-6824-01A	0 years, male, white, stage:Stage IVA, alive, 77 days	30.9
TCGA-WA-A7H4-01A	0 years, male, white, stage:Stage II, alive, 443 days	29.9
TCGA-CN-5355-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1278 days	29.8
TCGA-BA-4075-01A	0 years, male, black or african american, stage:Stage III, dead, 283 days	28.7
TCGA-IQ-7631-01A	0 years, female, white, stage:Stage II, alive, 1172 days	28.7
TCGA-H7-A6C4-01A	0 years, female, white, stage:Stage IVA, dead, 414 days	28.4
TCGA-BA-5152-01A	0 years, male, white, stage:Stage IVA, alive, 1288 days	28.3
TCGA-CV-5431-01A	0 years, male, white, stage:Stage IVA, dead, 522 days	28.0
TCGA-CV-7410-01A	0 years, male, white, stage:Stage III, dead, 6417 days	28.0
TCGA-C9-A47Z-01A	0 years, female, asian, stage:Stage III, dead, 191 days	27.7
TCGA-CR-7373-01A	0 years, male, white, stage:Stage IVA, alive, 889 days	26.9
TCGA-CR-7376-01A	0 years, male, white, stage:Stage III, alive, 972 days	26.1
TCGA-CN-6017-01A	0 years, male, white, stage:Stage IVA, dead, 853 days	25.3
TCGA-CV-A6JE-01A	0 years, male, white, stage:'--, alive, 1075 days	24.9
TCGA-CV-5971-01A	0 years, male, white, stage:Stage IVA, alive, 701 days	24.3
TCGA-CV-6950-01A	0 years, male, white, stage:Stage IVA, dead, 459 days	23.8
TCGA-CQ-A4CH-01A	0 years, male, asian, stage:Stage II, dead, 379 days	23.6
TCGA-4P-AA8J-01A	0 years, male, black or african american, stage:Stage IVA, alive, 102 days	23.4
TCGA-HD-8224-01A	0 years, male, white, stage:Stage IVA, dead, 446 days	22.8
TCGA-CV-6953-01A	0 years, female, white, stage:Stage III, dead, 1641 days	22.4
TCGA-D6-A6EM-01A	0 years, female, white, stage:Stage III, alive, 232 days	22.4
TCGA-CR-6471-01A	0 years, male, white, stage:Stage IVA, dead, 1202 days	22.4
TCGA-CQ-6220-01A	0 years, male, white, stage:Stage III, dead, 985 days	21.4
TCGA-CV-A45O-01A	0 years, male, white, stage:'--, alive, 851 days	19.4
TCGA-BA-5557-01A	0 years, female, stage:Stage III, alive, 623 days	19.0
TCGA-HD-8634-01A	0 years, female, white, stage:Stage I, dead, 385 days	18.9
TCGA-CX-7085-01A	0 years, female, white, stage:Stage I, alive, 321 days	18.2
TCGA-CV-A45Q-01A	0 years, female, white, stage:'--, dead, 5152 days	17.4
TCGA-CV-5970-01A	0 years, male, white, stage:Stage IVA, dead, 406 days	16.8
TCGA-CV-5439-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	16.3
TCGA-T2-A6X2-01A	0 years, male, white, stage:Stage III, alive, 987 days	15.9
TCGA-CN-6022-01A	0 years, male, white, stage:Stage IVA, dead, 281 days	15.1
TCGA-CV-6942-01A	0 years, female, white, stage:Stage II, alive, 4282 days	14.9
TCGA-CX-7219-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1045 days	14.8
TCGA-QK-A6IH-01A	0 years, female, white, stage:Stage IVB, alive, 653 days	14.6
TCGA-CR-6482-01A	0 years, male, black or african american, stage:'--, alive, 345 days	14.5
TCGA-CR-7367-01A	0 years, male, white, stage:Stage IVA, alive, 1440 days	14.3
TCGA-CV-7091-01A	0 years, male, white, stage:Stage I, alive, 3381 days	13.7
TCGA-CQ-A4C7-01A	0 years, male, white, stage:Stage III, dead, 353 days	12.4
TCGA-BA-A6DG-01A	0 years, male, white, stage:'--, dead, 69 days	12.4
TCGA-CV-7433-01A	0 years, male, white, stage:Stage IVA, dead, 601 days	12.4
TCGA-D6-A6ES-01A	0 years, male, white, stage:Stage IVA, alive, 389 days	12.3
TCGA-UF-A7JT-01A	0 years, female, white, stage:Stage IVA, dead, 993 days	12.0
TCGA-CQ-6224-01A	0 years, male, white, stage:Stage IVA, alive, 1721 days	11.5
TCGA-HD-8635-01A	0 years, female, white, stage:Stage III, alive, 695 days	11.4
TCGA-CN-4734-01A	0 years, male, white, stage:Stage II, alive, 1690 days	10.5
TCGA-CV-A6JZ-01A	0 years, male, white, stage:Stage II, alive, 714 days	10.4
TCGA-CN-5361-01A	0 years, male, white, stage:Stage IVA, dead, 2120 days	9.9
TCGA-BB-A5HZ-01A	0 years, male, white, stage:Stage IVA, alive, 827 days	9.7
TCGA-IQ-A61E-01A	0 years, female, white, stage:Stage III, alive, 1147 days	9.5
TCGA-UF-A7J9-01A	0 years, male, white, stage:Stage IVA, alive, 1358 days	9.5
TCGA-CN-4723-01A	0 years, male, white, stage:Stage IVA, alive, 1699 days	8.8
TCGA-CV-5440-01A	0 years, male, white, stage:Stage IVA, alive, 3270 days	8.5
TCGA-CV-7425-01A	0 years, female, white, stage:Stage III, dead, 1718 days	8.4
TCGA-MT-A67F-01A	0 years, female, white, stage:Stage IVA, alive, 384 days	8.3
TCGA-CN-6023-01A	0 years, male, white, stage:Stage IVA, alive, 1584 days	7.9
TCGA-CV-5430-01A	0 years, male, white, stage:Stage IVA, alive, 4241 days	7.6
TCGA-CV-7102-01A	0 years, female, white, stage:Stage IVA, dead, 56 days	7.0
TCGA-RS-A6TO-01A	0 years, female, white, stage:Stage IVA, dead, 387 days	6.5
TCGA-CN-6018-01A	0 years, female, white, stage:Stage IVA, dead, 580 days	6.5
TCGA-D6-6516-01A	0 years, male, white, stage:Stage I, alive, 773 days	6.2
TCGA-CV-7104-01A	0 years, female, white, stage:Stage IVA, dead, 393 days	6.1
TCGA-CV-7242-01A	0 years, female, white, stage:Stage II, alive, 1095 days	6.0
TCGA-UF-A718-01A	0 years, male, white, stage:Stage IVA, alive, 1971 days	5.0
TCGA-DQ-7591-01A	0 years, male, white, stage:'--, alive, 622 days	4.8
TCGA-CV-6933-01A	0 years, male, white, stage:Stage III, dead, 2741 days	4.7
TCGA-DQ-5629-01A	0 years, male, white, stage:'--, dead, 941 days	4.5
TCGA-CN-6992-01A	0 years, male, white, stage:Stage IVA, alive, 1066 days	4.5
TCGA-CQ-7068-01A	0 years, female, white, stage:Stage II, alive, 1309 days	4.4
TCGA-CV-7414-01A	0 years, male, white, stage:Stage IVA, dead, 14 days	4.3
TCGA-CN-6994-01A	0 years, male, white, stage:Stage IVA, alive, 1183 days	4.1
TCGA-CN-6021-01A	0 years, female, white, stage:'--, dead, 276 days	4.0
TCGA-IQ-A61H-01A	0 years, male, white, stage:Stage II, alive, 1138 days	3.7
TCGA-UF-A7JO-01A	0 years, female, white, stage:Stage IVA, dead, 631 days	3.7
TCGA-HD-7753-01A	0 years, male, black or african american, stage:Stage I, alive, 866 days	3.6
TCGA-CN-6010-01A	0 years, male, white, stage:Stage IVA, alive, 1523 days	3.4
TCGA-IQ-A61I-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2 days	3.2
TCGA-P3-A6T2-01A	0 years, male, white, stage:Stage IVA, alive, 2298 days	2.9
TCGA-CV-7434-01A	0 years, male, white, stage:Stage IVA, dead, 218 days	2.8
TCGA-CQ-A4CI-01A	0 years, male, white, stage:Stage III, alive, 950 days	2.6
TCGA-QK-A6IF-01A	0 years, male, white, stage:'--, alive, 704 days	2.3
TCGA-CV-7245-01A	0 years, male, white, stage:Stage IVA, alive, 797 days	2.1
TCGA-BA-A8YP-01A	0 years, male, black or african american, stage:Stage IVB, alive, 499 days	2.1
TCGA-D6-A6EP-01A	0 years, male, white, stage:Stage III, alive, 424 days	2.0
TCGA-CV-7422-01A	0 years, female, white, stage:Stage IVA, dead, 1037 days	1.9
TCGA-CN-6012-01A	0 years, male, white, stage:Stage IVA, alive, 1460 days	1.9
TCGA-UF-A719-01A	0 years, male, stage:Stage II, alive, 1663 days	1.8
TCGA-HD-A6HZ-01A	0 years, female, white, stage:Stage III, alive, 111 days	1.7
TCGA-CV-7261-01A	0 years, male, white, stage:Stage IVA, alive, 1512 days	1.7
TCGA-UF-A7JS-01A	0 years, male, white, stage:Stage IVA, dead, 680 days	1.7
TCGA-CR-7383-01A	0 years, female, white, stage:Stage I, dead, 521 days	1.7
TCGA-BA-A4IF-01A	0 years, male, white, stage:'--, alive, 895 days	1.6
TCGA-MZ-A6I9-01A	0 years, male, white, stage:'--, dead, 489 days	1.5
TCGA-CV-6940-01A	0 years, female, white, stage:Stage III, dead, 804 days	1.5
TCGA-CV-7432-01A	0 years, male, white, stage:Stage II, dead, 2570 days	1.5
TCGA-BB-A5HY-01A	0 years, male, white, stage:Stage IVA, dead, 321 days	1.5
TCGA-BB-8596-01A	0 years, female, white, stage:Stage IVA, alive, 2161 days	1.4
TCGA-CN-4741-01A	0 years, male, white, stage:Stage IVA, alive, 2239 days	1.3
TCGA-IQ-A61G-01A	0 years, male, white, stage:Stage IVA, alive, 360 days	1.3
TCGA-CN-5369-01A	0 years, female, white, stage:Stage IVA, dead, 1 days	1.3
TCGA-CV-A6K1-01A	0 years, male, white, stage:Stage IVA, alive, 685 days	1.3
TCGA-CN-5364-01A	0 years, male, white, stage:Stage IVA, dead, 493 days	1.2
TCGA-CV-7101-01A	0 years, male, white, stage:Stage II, dead, 160 days	1.2
TCGA-CN-5360-01A	0 years, male, white, stage:Stage IVA, alive, 2169 days	1.1
TCGA-CV-6962-01A	0 years, male, white, stage:Stage IVA, dead, 126 days	1.0
TCGA-CQ-6225-01A	0 years, male, white, stage:Stage III, dead, 403 days	1.0
TCGA-QK-A6V9-01A	0 years, male, white, stage:Stage II, alive, 833 days	1.0
TCGA-CV-7407-01A	0 years, female, white, stage:Stage II, dead, 1081 days	1.0
TCGA-CR-7374-01A	0 years, female, white, stage:'--, alive, 30 days	1.0
TCGA-CN-6019-01A	0 years, male, white, stage:Stage IVA, alive, 1038 days	0.9
TCGA-HD-7229-01A	0 years, male, white, stage:Stage IVA, alive, 1027 days	0.9
TCGA-CV-7247-01A	0 years, male, white, stage:Stage III, dead, 577 days	0.9
TCGA-CN-4728-01A	0 years, male, white, stage:Stage IVA, alive, 1724 days	0.9
TCGA-D6-6515-01A	0 years, female, white, stage:Stage II, dead, 403 days	0.9
TCGA-CN-5374-01A	0 years, female, white, stage:Stage IVA, dead, 1732 days	0.9
TCGA-CR-7370-01A	0 years, female, white, stage:'--, alive, 105 days	0.8
TCGA-CR-6472-01A	0 years, male, white, stage:'--, alive, 1050 days	0.8
TCGA-BB-4228-01A	0 years, male, white, stage:Stage III, alive, 559 days	0.8
TCGA-CV-6948-01A	0 years, female, white, stage:Stage IVB, dead, 1289 days	0.8
TCGA-KU-A6H8-01A	0 years, male, white, stage:Stage IVA, dead, 327 days	0.8
TCGA-CN-6011-01A	0 years, male, white, stage:Stage IVA, alive, 933 days	0.8
TCGA-QK-A652-01A	0 years, male, white, stage:Stage III, alive, 645 days	0.8
TCGA-CR-5250-01A	0 years, male, white, stage:'--, alive, 799 days	0.8
TCGA-KU-A66S-01A	0 years, female, white, stage:Stage III, dead, 406 days	0.8
TCGA-CN-5367-01A	0 years, female, white, stage:Stage IVA, dead, 352 days	0.8
TCGA-CN-4730-01A	0 years, male, white, stage:Stage IVA, alive, 817 days	0.8
TCGA-CX-A4AQ-01A	0 years, male, white, stage:Stage IVA, alive, 1555 days	0.7
TCGA-CN-A6V7-01A	0 years, male, white, stage:Stage IVA, alive, 594 days	0.7
TCGA-BB-4224-01A	0 years, male, white, stage:Stage IVA, alive, 278 days	0.7
TCGA-CV-6937-01A	0 years, male, white, stage:Stage II, dead, 624 days	0.7
TCGA-CR-6477-01A	0 years, female, white, stage:'--, alive, 514 days	0.7
TCGA-CN-4729-01A	0 years, male, white, stage:Stage III, alive, 392 days	0.7
TCGA-CR-7388-01A	0 years, female, white, stage:'--, dead, 823 days	0.7
TCGA-CR-7385-01A	0 years, male, white, stage:'--, alive, 997 days	0.7
TCGA-F7-8489-01A	0 years, male, white, stage:Stage II, alive, 658 days	0.6
TCGA-CV-6938-01A	0 years, male, white, stage:Stage II, dead, 144 days	0.6
TCGA-CV-A460-01A	0 years, male, white, stage:'--, dead, 1838 days	0.6
TCGA-BA-A4IG-01A	0 years, male, white, stage:'--, alive, 855 days	0.6
TCGA-CN-4731-01A	0 years, female, white, stage:Stage IVA, dead, 998 days	0.6
TCGA-QK-A6IG-01A	0 years, male, white, stage:Stage III, dead, 222 days	0.6
TCGA-CR-7404-01A	0 years, male, white, stage:'--, alive, 1472 days	0.6
TCGA-TN-A7HJ-01A	0 years, male, white, stage:Stage IVA, alive, 403 days	0.6
TCGA-CV-A6JT-01A	0 years, male, white, stage:Stage II, alive, 852 days	0.6
TCGA-CN-A63T-01A	0 years, male, white, stage:Stage IVA, alive, 225 days	0.6
TCGA-P3-A5QE-01A	0 years, male, white, stage:Stage III, alive, 1559 days	0.6
TCGA-CQ-A4CG-01A	0 years, female, white, stage:Stage III, dead, 430 days	0.6
TCGA-H7-A76A-01A	0 years, male, white, stage:'--, alive, 637 days	0.6
TCGA-CV-7103-01A	0 years, male, white, stage:Stage IVA, dead, 1591 days	0.5
TCGA-CR-7380-01A	0 years, male, white, stage:Stage IVB, dead, 606 days	0.5
TCGA-CV-A6K2-01A	0 years, male, white, stage:Stage IVA, dead, 317 days	0.5
TCGA-CR-7372-01A	0 years, male, white, stage:Stage I, alive, 759 days	0.5
TCGA-F7-A61W-01A	0 years, male, asian, stage:Stage IVA, alive, 14 days	0.5
TCGA-CN-4735-01A	0 years, male, white, stage:Stage IVA, alive, 1737 days	0.5
TCGA-CV-A6JD-01A	0 years, female, white, stage:'--, dead, 182 days	0.5
TCGA-BA-5555-01A	0 years, male, black or african american, stage:Stage IVA, alive, 520 days	0.5
TCGA-CR-6473-01A	0 years, male, white, stage:'--, alive, 1125 days	0.5
TCGA-CV-A45V-01A	0 years, female, white, stage:Stage IVA, dead, 32 days	0.5
TCGA-UF-A71A-01A	0 years, male, white, stage:Stage IVA, dead, 86 days	0.5
TCGA-CV-7429-01A	0 years, male, white, stage:Stage IVA, dead, 107 days	0.5
TCGA-HD-8314-01A	0 years, male, white, stage:Stage III, alive, 670 days	0.5
TCGA-QK-A64Z-01A	0 years, female, white, stage:Stage IVA, dead, 641 days	0.5
TCGA-D6-6827-01A	0 years, female, white, stage:Stage I, alive, 568 days	0.5
TCGA-CN-A49B-01A	0 years, male, white, stage:Stage III, alive, 904 days	0.5
TCGA-CV-7423-01A	0 years, male, white, stage:Stage II, dead, 3059 days	0.5
TCGA-BA-A4IH-01A	0 years, male, white, stage:'--, alive, 622 days	0.5
TCGA-CV-5444-01A	0 years, male, black or african american, stage:Stage IVA, alive, 2437 days	0.5
TCGA-CN-6016-01A	0 years, male, white, stage:Stage IVA, alive, 1443 days	0.5
TCGA-CV-7446-01A	0 years, male, white, stage:Stage IVA, dead, 1093 days	0.5
TCGA-CV-5432-01A	0 years, male, white, stage:Stage III, alive, 3930 days	0.4
TCGA-CN-5365-01A	0 years, male, white, stage:Stage IVB, dead, 351 days	0.4
TCGA-CQ-A4CB-01A	0 years, male, stage:Stage III, alive, 893 days	0.4
TCGA-C9-A480-01A	0 years, female, asian, stage:Stage III, alive, 386 days	0.4
TCGA-CV-5966-01A	0 years, female, white, stage:Stage IVA, dead, 545 days	0.4
TCGA-CN-4740-01A	0 years, female, white, stage:Stage IVA, dead, 839 days	0.4
TCGA-CV-A45T-01A	0 years, female, white, stage:'--, dead, 4856 days	0.4
TCGA-MT-A51X-01A	0 years, male, white, stage:Stage IVA, alive, 242 days	0.4
TCGA-HD-7831-01A	0 years, male, white, stage:Stage IVA, alive, 667 days	0.4
TCGA-DQ-7588-01A	0 years, male, white, stage:'--, dead, 427 days	0.4
TCGA-BA-4076-01A	0 years, male, white, stage:'--, dead, 415 days	0.4
TCGA-P3-A6T0-01A	0 years, female, white, stage:Stage IVA, alive, 578 days	0.4
TCGA-CV-A45U-01A	0 years, male, white, stage:Stage IVA, dead, 1079 days	0.4
TCGA-BA-5559-01A	0 years, male, white, stage:'--, dead, 2083 days	0.4
TCGA-CV-7100-01A	0 years, male, white, stage:Stage III, dead, 274 days	0.4
TCGA-D6-A6EN-01A	0 years, male, white, stage:Stage III, alive, 687 days	0.4
TCGA-KU-A66T-01A	0 years, female, white, stage:Stage IVA, alive, 552 days	0.4
TCGA-CN-6996-01A	0 years, female, white, stage:Stage IVA, dead, 530 days	0.4
TCGA-BA-A6DB-01A	0 years, female, white, stage:Stage I, alive, 216 days	0.4
TCGA-CN-5356-01A	0 years, male, white, stage:Stage III, alive, 1409 days	0.4
TCGA-F7-A61S-01A	0 years, male, white, stage:Stage III, alive, 576 days	0.3
TCGA-CR-6474-01A	0 years, male, white, stage:Stage IVA, dead, 564 days	0.3
TCGA-MT-A51W-01A	0 years, female, white, stage:Stage I, alive, 437 days	0.3
TCGA-CV-A463-01A	0 years, female, white, stage:Stage IVA, dead, 23 days	0.3
TCGA-CV-5442-01A	0 years, female, white, stage:Stage IVA, alive, 2327 days	0.3
TCGA-HD-A6I0-01A	0 years, male, white, stage:Stage IVA, alive, 210 days	0.3
TCGA-IQ-A6SG-01A	0 years, female, white, stage:Stage III, alive, 579 days	0.3
TCGA-CV-6436-01A	0 years, male, white, stage:Stage IVA, alive, 1899 days	0.3
TCGA-BA-5153-01A	0 years, male, white, stage:'--, dead, 1762 days	0.3
TCGA-CR-7390-01A	0 years, male, white, stage:Stage IVA, alive, 1508 days	0.3
TCGA-BB-4223-01A	0 years, male, white, stage:Stage IVA, alive, 3221 days	0.3
TCGA-CN-A63V-01A	0 years, male, white, stage:Stage IVA, alive, 679 days	0.3
TCGA-F7-A50G-01A	0 years, male, white, stage:Stage III, alive, 616 days	0.3
TCGA-UF-A7JA-01A	0 years, female, white, stage:Stage IVA, alive, 2265 days	0.3
TCGA-CR-7377-01A	0 years, male, white, stage:Stage IVA, dead, 279 days	0.3
TCGA-MZ-A7D7-01A	0 years, male, white, stage:Stage IVA, alive, 547 days	0.3
TCGA-IQ-7630-01A	0 years, male, white, stage:Stage II, alive, 485 days	0.3
TCGA-CV-6961-01A	0 years, male, white, stage:Stage II, dead, 76 days	0.3
TCGA-MZ-A5BI-01A	0 years, male, white, stage:'--, dead, 217 days	0.3
TCGA-CQ-6219-01A	0 years, female, white, stage:Stage IVA, dead, 479 days	0.3
TCGA-CV-7090-01A	0 years, male, white, stage:Stage II, alive, 5252 days	0.3
TCGA-F7-A61V-01A	0 years, male, white, stage:Stage II, alive, 759 days	0.3
TCGA-BA-A6DL-01A	0 years, male, white, stage:'--, alive, 623 days	0.3
TCGA-CV-7236-01A	0 years, female, white, stage:Stage IVA, dead, 144 days	0.3
TCGA-UF-A7JJ-01A	0 years, male, stage:Stage IVA, alive, 549 days	0.3
TCGA-CV-6936-01A	0 years, male, white, stage:Stage IVA, dead, 166 days	0.3
TCGA-CX-7086-01A	0 years, male, black or african american, stage:Stage III, alive, 573 days	0.3
TCGA-CQ-7071-01A	0 years, female, white, stage:Stage III, alive, 1311 days	0.3
TCGA-QK-A6II-01A	0 years, male, white, stage:Stage IVA, dead, 284 days	0.3
TCGA-CN-4738-01A	0 years, male, white, stage:Stage IVA, dead, 436 days	0.3
TCGA-CR-7402-01A	0 years, male, white, stage:'--, alive, 911 days	0.3
TCGA-CV-6003-01A	0 years, female, white, stage:Stage III, alive, 1665 days	0.3
TCGA-P3-A6SX-01A	0 years, male, white, stage:Stage III, dead, 1430 days	0.3
TCGA-CV-7235-01A	0 years, male, white, stage:Stage II, alive, 2347 days	0.3
TCGA-CV-A6JM-01A	0 years, male, white, stage:'--, dead, 194 days	0.3
TCGA-HD-A633-01A	0 years, male, white, stage:Stage IVA, alive, 421 days	0.3
TCGA-CV-7427-01A	0 years, female, white, stage:Stage II, dead, 4760 days	0.3
TCGA-T3-A92N-01A	0 years, male, black or african american, stage:Stage IVA, dead, 95 days	0.2
TCGA-BB-A5HU-01A	0 years, male, white, stage:Stage IVA, alive, 782 days	0.2
TCGA-CV-5435-01A	0 years, male, white, stage:Stage IVA, dead, 2319 days	0.2
TCGA-CV-7406-01A	0 years, male, white, stage:Stage II, dead, 1748 days	0.2
TCGA-CV-7438-01A	0 years, female, white, stage:Stage I, dead, 194 days	0.2
TCGA-CV-A45Y-01A	0 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days	0.2
TCGA-BA-A4II-01A	0 years, male, white, stage:Stage II, alive, 918 days	0.2
TCGA-CR-7399-01A	0 years, female, white, stage:Stage IVA, alive, 181 days	0.2
TCGA-CN-5370-01A	0 years, male, white, stage:Stage III, dead, 259 days	0.2
TCGA-CN-A49C-01A	0 years, male, white, stage:'--, alive, 645 days	0.2
TCGA-D6-A6EK-01A	0 years, male, white, stage:Stage III, alive, 875 days	0.2
TCGA-BA-A6DA-01A	0 years, female, white, stage:Stage IVA, alive, 351 days	0.2
TCGA-P3-A5QA-01A	0 years, male, stage:Stage I, alive, 2182 days	0.2
TCGA-CR-6492-01A	0 years, male, white, stage:Stage III, alive, 479 days	0.2
TCGA-CV-7411-01A	0 years, female, white, stage:Stage IVA, dead, 2717 days	0.2
TCGA-HD-7754-01A	0 years, male, white, stage:Stage IVA, alive, 783 days	0.2
TCGA-CN-6988-01A	0 years, male, white, stage:Stage IVA, alive, 318 days	0.2
TCGA-D6-6826-01A	0 years, female, white, stage:Stage IVA, dead, 348 days	0.2
TCGA-F7-A623-01A	0 years, male, white, stage:Stage IVA, alive, 616 days	0.2
TCGA-BA-A6DJ-01A	0 years, male, asian, stage:Stage IVA, dead, 407 days	0.2
TCGA-CN-6013-01A	0 years, male, white, stage:Stage IVA, dead, 727 days	0.2
TCGA-P3-A6T6-01A	0 years, male, white, stage:Stage IVA, dead, 395 days	0.2
TCGA-CX-7082-01A	0 years, male, white, stage:Stage IVA, dead, 11 days	0.2
TCGA-CV-7415-01A	0 years, male, white, stage:Stage IVA, dead, 695 days	0.2
TCGA-CV-6959-01A	0 years, male, white, stage:Stage III, dead, 256 days	0.2
TCGA-H7-8501-01A	0 years, male, white, stage:Stage IVA, alive, 461 days	0.2
TCGA-CN-6995-01A	0 years, male, white, stage:Stage IVA, dead, 112 days	0.2
TCGA-CR-7392-01A	0 years, female, white, stage:Stage IVA, alive, 1425 days	0.2
TCGA-CR-5243-01A	0 years, male, white, stage:'--, alive, 2562 days	0.2
TCGA-CN-5363-01A	0 years, male, black or african american, stage:Stage IVB, dead, 253 days	0.2
TCGA-CR-7364-01A	0 years, male, white, stage:Stage III, alive, 1435 days	0.2
TCGA-CN-A6V3-01A	0 years, male, white, stage:Stage IVA, alive, 742 days	0.2
TCGA-CN-A63W-01A	0 years, female, white, stage:Stage IVA, dead, 377 days	0.2
TCGA-H7-8502-01A	0 years, male, white, stage:Stage IVA, alive, 458 days	0.2
TCGA-P3-A5Q6-01A	0 years, male, white, stage:Stage IVA, dead, 480 days	0.2
TCGA-CV-5976-01A	0 years, male, white, stage:Stage IVA, alive, 1478 days	0.2
TCGA-CQ-5330-01A	0 years, female, white, stage:Stage IVA, alive, 1897 days	0.2
TCGA-BA-5151-01A	0 years, male, white, stage:Stage IVA, alive, 722 days	0.2
TCGA-CV-7097-01A	0 years, male, white, stage:Stage II, dead, 385 days	0.2
TCGA-CV-6954-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2002 days	0.2
TCGA-CN-5358-01A	0 years, male, white, stage:Stage II, dead, 261 days	0.2
TCGA-CV-7178-01A	0 years, female, white, stage:Stage IVA, dead, 2166 days	0.2
TCGA-BA-7269-01A	0 years, male, white, stage:Stage III, alive, 1273 days	0.1
TCGA-F7-A620-01A	0 years, male, white, stage:Stage III, alive, 543 days	0.1
TCGA-CR-7397-01A	0 years, male, white, stage:Stage IVA, alive, 754 days	0.1
TCGA-CQ-A4CD-01A	0 years, male, white, stage:Stage IVA, alive, 1022 days	0.1
TCGA-CQ-5325-01A	0 years, male, white, stage:Stage I, dead, 654 days	0.1
TCGA-CV-7089-01A	0 years, male, white, stage:Stage IVA, dead, 1972 days	0.1
TCGA-CR-7379-01A	0 years, female, white, stage:Stage IVA, alive, 1036 days	0.1
TCGA-P3-A6T8-01A	0 years, male, white, stage:Stage IVA, alive, 400 days	0.1
TCGA-CR-7365-01A	0 years, male, white, stage:Stage IVA, alive, 1191 days	0.1
TCGA-BA-6873-01A	0 years, male, white, stage:Stage IVA, alive, 122 days	0.1
TCGA-CQ-6218-01A	0 years, female, white, stage:Stage IVA, alive, 1253 days	0.1
TCGA-CV-7180-01A	0 years, male, white, stage:Stage II, dead, 327 days	0.1
TCGA-D6-8568-01A	0 years, male, white, stage:Stage II, alive, 759 days	0.1
TCGA-CN-A498-01A	0 years, female, white, stage:Stage III, dead, 773 days	0.1
TCGA-BB-A6UM-01A	0 years, male, white, stage:Stage III, alive, 393 days	0.1
TCGA-BA-5558-01A	0 years, male, white, stage:'--, alive, 1995 days	0.1
TCGA-CV-7238-01A	0 years, female, white, stage:Stage II, alive, 2727 days	0.1
TCGA-CN-5373-01A	0 years, female, white, stage:Stage I, alive, 1584 days	0.1
TCGA-CV-7430-01A	0 years, male, white, stage:Stage IVA, dead, 495 days	0.1
TCGA-IQ-A61O-01A	0 years, male, white, stage:Stage IVA, dead, 421 days	0.1
TCGA-CN-4733-01A	0 years, male, white, stage:Stage III, alive, 1586 days	0.1
TCGA-P3-A6T5-01A	0 years, female, white, stage:Stage IVA, dead, 882 days	0.1
TCGA-CV-A45P-01A	0 years, female, white, stage:Stage I, alive, 639 days	0.1
TCGA-DQ-5625-01A	0 years, female, white, stage:'--, dead, 1133 days	0.1
TCGA-D6-6825-01A	0 years, male, white, stage:Stage I, alive, 491 days	0.1
TCGA-CV-5977-01A	0 years, male, white, stage:Stage IVA, alive, 1840 days	0.1
TCGA-CV-A45X-01A	0 years, male, white, stage:Stage IVA, dead, 198 days	0.1
TCGA-CV-6952-01A	0 years, female, white, stage:Stage IVA, dead, 185 days	0.1
TCGA-F7-A624-01A	0 years, male, white, stage:Stage II, alive, 378 days	0.1
TCGA-P3-A6T3-01A	0 years, male, white, stage:Stage IVA, dead, 577 days	0.1
TCGA-CV-6943-01A	0 years, male, white, stage:Stage III, dead, 602 days	0.1
TCGA-CQ-5331-01A	0 years, female, white, stage:'--, alive, 1399 days	0.1
TCGA-D6-6517-01A	0 years, male, white, stage:Stage III, alive, 292 days	0.1
TCGA-BB-A6UO-01A	0 years, female, white, stage:Stage IVA, dead, 268 days	0.1
TCGA-CQ-7072-01A	0 years, male, white, stage:Stage II, alive, 2359 days	0.1
TCGA-BB-4227-01A	0 years, male, white, stage:Stage IVA, alive, 134 days	0.1
TCGA-IQ-A6SH-01A	0 years, male, black or african american, stage:Stage III, alive, 471 days	0.1
TCGA-HL-7533-01A	0 years, male, white, stage:'--, alive, 1057 days	0.1
TCGA-CV-6935-01A	0 years, male, white, stage:Stage IVA, dead, 295 days	0.0
TCGA-CN-4737-01A	0 years, male, white, stage:Stage IVA, alive, 625 days	0.0
TCGA-CQ-5332-01A	0 years, male, white, stage:Stage III, dead, 317 days	0.0
TCGA-CQ-5334-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	0.0
TCGA-CV-7250-01A	0 years, male, white, stage:Stage IVA, dead, 2900 days	0.0
TCGA-CQ-5326-01A	0 years, male, white, stage:Stage IVA, dead, 89 days	0.0
TCGA-CV-6941-01A	0 years, male, white, stage:Stage III, dead, 342 days	0.0
TCGA-BA-A6DI-01A	0 years, male, black or african american, stage:'--, dead, 336 days	0.0
TCGA-D6-A6EO-01A	0 years, male, white, stage:Stage IVA, alive, 759 days	0.0
TCGA-CN-6998-01A	0 years, male, white, stage:Stage IVA, dead, 357 days	0.0
TCGA-CR-6493-01A	0 years, male, black or african american, stage:Stage IVA, dead, 282 days	0.0
TCGA-HD-7832-01A	0 years, male, white, stage:Stage IVA, alive, 836 days	0.0
TCGA-UF-A7JV-01A	0 years, female, white, stage:Stage IVA, dead, 90 days	0.0
TCGA-CV-A6JN-01A	0 years, male, white, stage:'--, alive, 906 days	0.0
TCGA-CR-7395-01A	0 years, female, white, stage:Stage II, alive, 930 days	0.0
TCGA-P3-A6T7-01A	0 years, male, white, stage:Stage IVA, dead, 487 days	0.0
TCGA-CN-4727-01A	0 years, male, white, stage:Stage IVA, alive, 1560 days	0.0
TCGA-CN-4736-01A	0 years, female, white, stage:'--, dead, 395 days	0.0
TCGA-CV-5979-01A	0 years, male, white, stage:Stage IVA, alive, 1315 days	0.0
TCGA-CV-A45W-01A	0 years, male, white, stage:Stage II, dead, 1398 days	0.0
TCGA-CN-A6UY-01A	0 years, male, white, stage:Stage IVA, alive, 713 days	0.0
TCGA-CQ-7069-01A	0 years, female, white, stage:Stage II, alive, 1274 days	0.0
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)

Number of samples

183

Samples

Sample ID	Sample type	nRPX
CPT0226340003	Tumor	2.9
CPT0013000004	Tumor	2.8
CPT0223970003	Tumor	2.2
CPT0094490004	Tumor	2.0
CPT0246590003	Tumor	1.9
CPT0163410003	Tumor	1.7
CPT0226270003	Normal	1.6
CPT0199820003	Tumor	1.4
CPT0195860003	Tumor	1.2
CPT0281470002	Normal	1.1
CPT0196210003	Tumor	1.1
CPT0195880003	Normal	1.1
CPT0088010003	Normal	0.9
CPT0199830003	Normal	0.9
CPT0236850004	Tumor	0.8
CPT0163430003	Normal	0.8
CPT0008960003	Normal	0.8
CPT0201860004	Normal	0.7
CPT0243090003	Tumor	0.7
CPT0220620003	Normal	0.7
CPT0195700003	Normal	0.7
CPT0163800003	Normal	0.7
CPT0235920003	Normal	0.6
CPT0008930003	Tumor	0.6
CPT0278700002	Normal	0.6
CPT0013030003	Normal	0.6
CPT0163530003	Tumor	0.6
CPT0246540003	Tumor	0.6
CPT0245190003	Normal	0.5
CPT0236870003	Normal	0.5
CPT0162890003	Tumor	0.5
CPT0199890003	Normal	0.5
CPT0127050003	Tumor	0.5
CPT0190850003	Tumor	0.5
CPT0190860003	Normal	0.4
CPT0169920003	Normal	0.4
C3N-02693-06	Normal	0.4
C3N-01620-05	Normal	0.4
CPT0248350003	Normal	0.4
CPT0245300003	Tumor	0.4
CPT0243140004	Normal	0.4
CPT0256560003	Tumor	0.4
CPT0245410003	Normal	0.4
CPT0194800003	Normal	0.4
CPT0163860003	Normal	0.4
CPT0246620003	Tumor	0.3
CPT0162940003	Tumor	0.3
CPT0226250004	Tumor	0.3
C3N-04275-05	Normal	0.3
C3N-04279-05	Normal	0.3
CPT0163020003	Normal	0.2
CPT0087820003	Tumor	0.2
CPT0177390003	Tumor	0.2
CPT0226350003	Normal	0.2
CPT0013460003	Normal	0.2
CPT0163790003	Tumor	0.2
CPT0011320003	Normal	0.2
CPT0226130003	Tumor	0.1
CPT0163910003	Tumor	0.1
CPT0013430003	Tumor	0.1
CPT0176770003	Tumor	0.1
CPT0226450003	Normal	0.1
CPT0095040003	Tumor	0.0
CPT0199880003	Tumor	0.0
CPT0242000004	Normal	-0.1
CPT0237500003	Normal	-0.1
CPT0235910003	Tumor	-0.1
CPT0245450003	Tumor	-0.1
CPT0199710003	Normal	-0.2
CPT0194790003	Tumor	-0.2
CPT0094420004	Tumor	-0.2
CPT0201830004	Tumor	-0.3
CPT0237480004	Tumor	-0.3
CPT0195680003	Tumor	-0.3
CPT0245180003	Tumor	-0.3
CPT0244890004	Tumor	-0.3
CPT0223460003	Normal	-0.4
CPT0087990003	Tumor	-0.4
CPT0222360003	Tumor	-0.4
C3N-00295-05	Normal	-0.4
CPT0008630003	Tumor	-0.5
CPT0245140003	Normal	-0.5
CPT0163840003	Tumor	-0.5
CPT0084650004	Normal	-0.5
CPT0094280004	Tumor	-0.6
CPT0011290003	Tumor	-0.6
CPT0162990004	Tumor	-0.6
CPT0245060004	Tumor	-0.6
CPT0163490003	Normal	-0.6
CPT0226440003	Tumor	-0.6
CPT0245020003	Normal	-0.7
CPT0169890003	Tumor	-0.7
CPT0245400003	Tumor	-0.8
CPT0024810003	Tumor	-0.8
CPT0248520003	Tumor	-0.8
CPT0226390003	Tumor	-0.9
CPT0226400003	Normal	-0.9
CPT0013250003	Normal	-0.9
C3N-00857-05	Normal	-0.9
CPT0177010003	Tumor	-0.9
CPT0123280003	Normal	-0.9
CPT0250310003	Tumor	-0.9
CPT0163650003	Tumor	-0.9
CPT0177220003	Normal	-1.0
CPT0169640003	Tumor	-1.0
CPT0207870004	Tumor	-1.0
C3N-01758-04	Normal	-1.0
CPT0220610003	Tumor	-1.0
CPT0169730003	Tumor	-1.0
CPT0245630003	Tumor	-1.1
CPT0163610003	Normal	-1.1
CPT0222200003	Normal	-1.1
CPT0084630009	Tumor	-1.1
CPT0248330003	Tumor	-1.1
C3N-04276-06	Normal	-1.1
CPT0245130003	Tumor	-1.2
C3N-01859-04	Normal	-1.2
CPT0237640003	Normal	-1.3
CPT0245680003	Tumor	-1.3
CPT0245460003	Normal	-1.3
CPT0094580003	Normal	-1.3
CPT0245560003	Normal	-1.4
CPT0163170003	Normal	-1.4
CPT0226090003	Normal	-1.4
CPT0088080003	Normal	-1.4
CPT0237150003	Normal	-1.5
CPT0236620003	Tumor	-1.5
CPT0199700003	Tumor	-1.5
CPT0196060003	Normal	-1.5
CPT0244940004	Tumor	-1.5
CPT0236640003	Normal	-1.6
CPT0163250003	Normal	-1.6
CPT0123190003	Normal	-1.6
CPT0163480003	Tumor	-1.6
CPT0194420003	Tumor	-1.6
CPT0194260003	Normal	-1.6
CPT0223450003	Tumor	-1.6
CPT0163240003	Tumor	-1.7
CPT0194250003	Tumor	-1.7
CPT0088430003	Normal	-1.7
CPT0245600003	Tumor	-1.7
CPT0013210004	Tumor	-1.7
CPT0163090003	Tumor	-1.7
CPT0177200003	Tumor	-1.7
CPT0163340003	Tumor	-1.8
CPT0123180003	Tumor	-1.8
CPT0184530003	Tumor	-1.8
CPT0226030003	Tumor	-1.8
CPT0196040003	Tumor	-1.8
CPT0163600003	Tumor	-1.9
CPT0245350003	Tumor	-1.9
CPT0245010003	Tumor	-1.9
CPT0229220002	Normal	-1.9
CPT0177710003	Tumor	-1.9
CPT0013130003	Tumor	-2.0
CPT0245730003	Tumor	-2.0
CPT0094350004	Tumor	-2.0
CPT0163160003	Tumor	-2.0
CPT0237620004	Tumor	-2.0
CPT0008520008	Tumor	-2.0
CPT0222180003	Tumor	-2.1
CPT0163740003	Tumor	-2.1
CPT0245500003	Tumor	-2.1
CPT0235470002	Normal	-2.1
CPT0163720003	Normal	-2.2
CPT0123260003	Tumor	-2.3
CPT0169740004	Normal	-2.3
CPT0245550003	Tumor	-2.3
CPT0094560004	Tumor	-2.4
CPT0235460003	Tumor	-2.4
CPT0241980004	Tumor	-2.5
CPT0011130005	Tumor	-2.6
CPT0261520003	Tumor	-2.7
CPT0088060004	Tumor	-2.9
CPT0245230004	Tumor	-3.0
CPT0237130004	Tumor	-3.2
CPT0246670003	Tumor	-3.2
CPT0088410003	Tumor	-3.3
CPT0194960003	Tumor	-4.0
CPT0229230003	Normal	N/A
CPT0169750003	Normal	N/A
CPT0229210003	Tumor	N/A
CPT0229190003	Tumor	N/A
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HEAD AND NECK CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	HPA048652	HPA055972	HPA055973	CAB022669	CAB047357
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Squamous cell carcinoma, NOS
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS Squamous cell carcinoma, metastatic, NOS