HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:38.1 nTPM
HPA Brain:35.7 nTPM
GTEx:38.1 nTPM
FANTOM5:176.5 Scaled Tags Per Million
Pig:43.3 nTPM
Mouse:45.5 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021302Antibody HPA021311Antibody HPA021479
Glial cells LowLowLow
Neuronal cells LowLowLow






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 35.7
Sample id Sample description nTPM
Hippocampus
nTPM: 35.3
2621 Female, age 67, right hemisphere 45.7
1898 Male, age 80, left hemisphere 42.1
2529 Female, age 94, left hemisphere 38.0
2148 Female, age 91, left hemisphere 33.5
1911 Female, age 85, right hemisphere 28.2
1855 Male, age 76, left hemisphere 24.6
Dentate gyrus
nTPM: 31.6
2530 Female, age 94, left hemisphere 42.9
2528 Male, age 74, both hemispheres 38.1
2010 Male, age 76, both hemispheres 35.8
2246 Female, age 85, both hemispheres 32.6
2531 Female, age 67, both hemispheres 24.7
1927 Female, age 91, both hemispheres 15.6
Entorhinal gyrus
nTPM: 29.8
2117 Female, age 91, right hemisphere 47.7
1787 Male, age 76, left hemisphere 31.8
2686 Male, age 75, right hemisphere 30.7
2764 Male, age 80, right hemisphere 26.9
1938 Female, age 85, left hemisphere 23.5
2613 Female, age 94, left hemisphere 18.4
Hippocampus, CA1
nTPM: 31.9
2527 Male, age 74, both hemispheres 40.2
2749 Male, age 80, left hemisphere 37.8
1873 Female, age 85, both hemispheres 34.5
2082 Female, age 91, right hemisphere 23.7
2045 Male, age 76, both hemispheres 23.2
Hippocampus, CA2
nTPM: 34.1
1963 Male, age 80, left hemisphere 42.0
2249 Male, age 74, both hemispheres 42.0
1892 Male, age 76, both hemispheres 38.8
2113 Female, age 91, right hemisphere 31.3
2437 Female, age 94, left hemisphere 26.1
1940 Female, age 85, left hemisphere 24.1
Hippocampus, CA3
nTPM: 28.5
2436 Male, age 74, both hemispheres 36.7
1867 Male, age 76, both hemispheres 33.3
1891 Female, age 85, both hemispheres 33.3
2861 Female, age 67, both hemispheres 26.1
2620 Female, age 94, left hemisphere 21.7
2137 Male, age 80, left hemisphere 20.1
Parahippocampal cortex
nTPM: 28.4
2532 Female, age 72, left hemisphere 36.5
1850 Male, age 80, both hemispheres 33.7
2692 Male, age 74, both hemispheres 33.3
2245 Female, age 91, both hemispheres 31.5
2250 Female, age 67, right hemisphere 29.7
2622 Female, age 67, right hemisphere 29.1
1990 Female, age 91, right hemisphere 29.0
2018 Male, age 76, both hemispheres 27.4
1933 Female, age 85, both hemispheres 20.5
2693 Female, age 94, both hemispheres 13.5
Perirhinal gyrus
nTPM: 23.9
1794 Male, age 80, right hemisphere 27.8
2521 Female, age 94, right hemisphere 27.8
1847 Female, age 91, left hemisphere 22.0
2848 Male, age 76, right hemisphere 21.6
1841 Female, age 85, right hemisphere 20.3
Subiculum
nTPM: 35.7
2619 Male, age 74, both hemispheres 45.7
2042 Male, age 76, both hemispheres 40.4
1901 Male, age 80, both hemispheres 35.2
1977 Female, age 85, both hemispheres 32.8
2729 Female, age 91, right hemisphere 31.6
2438 Female, age 94, left hemisphere 28.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 38.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.1
Samples: 197

Max nTPM: 85.4
Min nTPM: 9.9
Std nTPM: 12.9
Median nTPM: 36.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 85.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 78.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 75.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 72.0
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 70.9
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 69.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 64.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 63.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 63.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 63.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 62.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 176.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 176.5
FF:10153-102I9 76 years, female 191.1
FF:10169-103B7 60 years, female 162.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 43.3
Pig sample Sample description nTPM
Subiculum
nTPM: 37.5
Samples: 4

Max nTPM: 41.4
Min nTPM: 35.5
Sample A Female 41.4
Sample B Female 37.5
Sample C Male 35.5
Sample D Male 35.5
Dorsal hippocampus
nTPM: 43.4
Samples: 4

Max nTPM: 53.0
Min nTPM: 34.7
Sample A Female 53.0
Sample B Female 41.5
Sample C Male 44.2
Sample D Male 34.7
Entorhinal cortex
nTPM: 36.2
Samples: 4

Max nTPM: 43.5
Min nTPM: 31.9
Sample A Female 34.5
Sample B Female 43.5
Sample C Male 34.9
Sample D Male 31.9
Ventral hippocampus
nTPM: 39.7
Samples: 4

Max nTPM: 46.0
Min nTPM: 34.6
Sample A Female 46.0
Sample B Female 34.6
Sample C Male 39.7
Sample D Male 38.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 45.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.4
Samples: 4

Max nTPM: 46.9
Min nTPM: 43.6
Sample A Male 46.4
Sample B Male 44.5
Sample C Female 46.9
Sample D Female 43.6
Hippocampal formation
nTPM: 45.5
Samples: 4

Max nTPM: 48.5
Min nTPM: 43.6
Sample A Male 44.4
Sample B Male 43.6
Sample C Female 45.5
Sample D Female 48.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
68269055 Antisense, RP_041208_01_G06, Mouse strain C57BL/6J (56 days, male) 3.6

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