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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF128 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
34.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
31.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
21.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
17.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
8.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
4.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
2.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
2.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
1.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
1.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF128 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
329.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
314.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
160.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
145.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
138.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
118.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
110.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
109.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
96.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
96.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
86.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
86.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
85.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
85.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
84.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
84.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
82.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
81.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
79.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
77.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
77.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
74.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
73.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
71.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
70.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
68.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
67.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
66.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
66.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
65.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
65.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
65.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
65.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
64.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
64.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
64.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
62.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
61.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
61.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
60.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
59.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
59.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
59.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
59.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
59.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
58.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
58.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
57.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
56.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
55.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
55.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
55.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
54.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
54.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
53.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
53.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
53.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
52.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
52.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
52.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
52.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
52.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
51.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
51.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
51.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
51.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
51.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
51.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
50.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
50.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
50.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
49.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
49.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
49.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
49.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
49.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
49.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
48.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
48.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
48.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
48.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
47.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
47.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
47.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
47.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
46.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
46.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
46.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
46.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
46.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
45.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
45.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
45.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
44.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
44.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
44.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
44.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
44.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
44.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
43.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
43.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
43.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
43.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
43.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
43.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
43.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
43.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
43.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
43.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
42.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
42.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
42.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
42.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
41.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
41.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
41.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
41.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
41.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
41.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
40.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
40.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
40.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
40.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
39.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
39.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
39.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
39.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
39.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
39.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
39.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
39.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
38.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
38.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
38.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
38.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
38.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
38.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
38.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
38.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
38.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
37.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
37.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
37.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
37.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
37.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
37.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
37.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
37.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
37.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
37.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
36.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
36.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
36.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
36.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
36.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
36.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
36.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
35.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
35.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
35.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
35.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
35.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
35.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
35.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
35.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
35.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
35.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
34.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
34.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
34.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
34.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
34.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
34.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
34.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
34.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
34.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
34.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
33.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
33.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
33.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
33.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
33.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
33.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
33.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
33.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
33.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
33.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
32.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
32.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
32.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
32.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
32.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
32.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
32.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
32.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
32.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
32.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
32.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
32.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
32.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
31.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
31.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
31.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
31.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
31.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
31.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
31.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
31.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
31.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
31.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
30.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
30.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
30.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
30.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
30.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
30.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
30.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
30.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
30.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
30.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
30.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
30.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
29.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
29.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
29.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
29.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
29.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
29.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
29.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
29.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
29.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
29.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
28.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
28.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
28.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
28.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
28.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
28.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
28.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
28.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
28.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
28.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
28.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
28.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
27.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
27.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
27.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
27.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
27.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
27.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
27.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
27.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
27.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
27.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
27.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
26.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
26.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
26.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
26.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
26.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
26.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
26.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
26.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
26.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
26.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
26.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
26.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
25.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
25.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
25.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
25.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
25.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
25.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
25.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
25.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
25.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
25.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
25.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
25.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
25.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
24.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
24.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
24.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
24.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
24.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
24.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
23.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
23.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
23.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
23.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
23.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
23.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
23.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
23.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
23.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
23.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
23.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
23.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
23.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
23.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
23.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
22.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
22.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
22.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
22.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
22.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
22.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
22.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
22.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
22.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
22.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
22.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
22.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
22.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
22.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
22.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
22.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
21.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
21.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
21.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
21.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
21.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
21.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
21.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
21.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
21.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
21.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
21.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
21.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
21.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
20.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
20.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
20.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
20.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
20.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
20.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
20.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
20.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
20.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
20.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
20.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
20.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
20.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
20.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
20.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
20.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
19.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
19.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
19.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
19.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
19.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
19.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
19.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
19.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
19.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
19.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
18.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
18.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
18.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
17.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
17.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
17.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
17.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
17.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
17.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
16.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
16.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
16.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
16.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
16.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
16.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
16.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
16.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
16.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
16.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
16.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
16.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
16.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
15.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
15.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
15.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
15.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
15.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
15.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
15.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
15.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
15.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
14.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
14.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
14.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
14.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
14.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
14.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
14.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
14.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
14.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
13.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
13.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
13.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
13.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
13.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
13.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
12.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
12.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
12.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
12.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
11.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
11.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
11.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
11.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
11.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
11.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
10.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
10.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
9.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
8.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
7.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
7.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
6.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
5.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
5.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
5.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
5.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
5.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
5.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
3.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
3.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
1.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
1.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
1.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
1.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
0.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF128 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
204.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
159.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
157.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
111.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
107.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
98.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
95.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
90.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
82.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
81.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
79.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
79.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
79.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
77.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
76.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
75.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
73.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
72.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
72.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
69.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
68.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
67.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
66.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
66.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
64.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
63.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
62.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
60.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
59.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
58.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
58.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
56.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
56.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
55.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
52.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
51.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
49.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
48.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
47.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
47.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
46.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
46.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
45.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
45.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
45.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
44.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
44.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
44.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
42.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
42.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
41.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
41.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
40.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
40.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
40.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
40.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
39.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
38.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
38.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
37.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
37.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
36.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
35.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
35.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
33.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
33.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
33.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
33.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
32.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
32.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
31.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
31.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
31.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
30.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
29.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
29.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
28.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
28.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
27.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
27.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
25.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
25.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
24.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
22.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
19.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
19.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
18.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
14.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
14.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
13.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
12.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
3.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
3.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF128 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
218.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
165.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
143.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
138.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
130.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
120.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
107.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
107.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
97.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
95.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
93.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
84.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
82.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
78.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
77.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
76.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
74.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
66.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
66.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
65.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
64.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
61.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
60.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
60.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
59.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
58.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
57.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
57.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
56.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
56.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
55.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
54.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
51.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
51.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
49.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
48.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
47.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
47.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
45.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
45.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
45.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
44.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
44.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
44.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
43.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
41.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
41.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
38.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
38.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
37.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
37.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
37.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
37.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
36.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
36.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
36.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
36.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
36.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
35.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
35.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
35.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
35.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
35.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
34.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
33.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
33.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
33.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
32.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
32.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
32.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
31.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
31.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
31.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
31.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
31.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
31.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
30.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
30.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
30.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
30.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
30.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
30.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
30.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
30.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
30.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
30.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
29.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
29.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
29.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
29.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
29.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
29.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
29.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
29.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
28.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
28.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
28.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
28.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
28.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
28.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
28.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
28.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
27.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
27.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
27.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
27.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
26.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
26.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
26.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
26.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
26.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
26.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
26.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
26.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
25.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
25.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
25.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
25.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
25.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
24.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
24.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
23.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
23.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
23.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
23.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
23.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
22.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
22.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
22.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
22.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
22.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
22.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
21.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
21.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
21.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
21.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
21.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
21.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
20.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
20.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
20.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
20.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
20.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
20.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
20.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
19.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
19.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
19.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
19.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
19.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
18.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
18.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
18.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
18.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
18.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
18.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
18.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
17.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
17.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
16.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
16.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
16.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
16.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
16.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
16.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
16.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
15.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
15.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
15.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
14.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
14.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
14.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
14.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
14.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
14.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
14.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
14.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
13.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
13.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
12.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
12.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
12.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
12.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
12.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
12.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
12.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
11.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
11.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
11.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
11.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
11.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
11.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
11.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
11.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
10.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
10.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
9.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
9.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
9.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
9.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
8.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
8.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
8.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
8.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
7.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
7.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
6.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
6.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
5.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
4.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
3.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
3.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
3.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
3.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
2.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
1.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
1.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
1.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
1.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
0.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
