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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
58.9
nTPM
HPA Brain:
86.0
nTPM
GTEx:
58.9
nTPM
FANTOM5:
64.4
Scaled Tags Per Million
Pig:
31.0
nTPM
Mouse:
0.9
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
86.0
Sample id
Sample description
nTPM
Amygdala nTPM: 86.0
2814
Male, age 76, right hemisphere
150.6
2695
Female, age 67, right hemisphere
89.9
2514
Male, age 75, right hemisphere
66.3
1987
Female, age 91, left hemisphere
64.1
2517
Female, age 94, left hemisphere
58.8
Basal amygdala nTPM: 57.7
2827
Female, age 67, right hemisphere
76.1
1955
Male, age 76, both hemispheres
70.0
2110
Male, age 80, left hemisphere
68.3
2685
Female, age 94, left hemisphere
62.3
2609
Male, age 75, right hemisphere
39.5
2243
Female, age 91, right hemisphere
30.1
Central amygdala nTPM: 71.2
1905
Male, age 76, both hemispheres
134.8
2701
Female, age 91, right hemisphere
80.8
2239
Male, age 80, left hemisphere
65.7
2515
Male, age 75, right hemisphere
43.0
2826
Female, age 94, left hemisphere
31.7
Corticomedial amygdala nTPM: 40.6
2429
Female, age 94, left hemisphere
54.2
2535
Female, age 67, right hemisphere
51.2
2240
Male, age 76, both hemispheres
45.0
2428
Male, age 75, right hemisphere
42.0
2829
Male, age 80, left hemisphere
33.2
2242
Female, age 91, right hemisphere
17.9
Lateral amygdala nTPM: 84.6
1883
Male, age 76, both hemispheres
132.4
2830
Female, age 67, right hemisphere
104.9
2255
Female, age 91, right hemisphere
79.3
2256
Male, age 80, left hemisphere
76.7
2516
Male, age 75, right hemisphere
65.8
2534
Female, age 94, left hemisphere
48.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
58.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 58.9
Samples: 152
Max nTPM: 247.3
Min nTPM: 2.5
Std nTPM: 37.9
Median nTPM: 52.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
247.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
204.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
184.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
149.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
147.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
138.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
134.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
128.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
127.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
120.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
119.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
118.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
115.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
107.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
106.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
106.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
105.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
101.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
100.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
100.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
97.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
92.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
91.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
90.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
90.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
88.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
86.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
86.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
82.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
81.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
80.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
79.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
78.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
77.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
76.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
75.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
75.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
75.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
74.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
73.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
72.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
72.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
72.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
71.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
69.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
68.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
68.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
67.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
66.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
64.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
63.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
63.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
62.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
62.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
61.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
61.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
60.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
60.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
60.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
59.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
59.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
59.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
59.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
58.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
58.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
58.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
58.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
57.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
57.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
56.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
56.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
55.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
55.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
55.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
54.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
52.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
52.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
51.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
51.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
51.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
51.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
50.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
49.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
49.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
48.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
47.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
46.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
45.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
45.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
44.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
43.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
42.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
41.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
41.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
41.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
40.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
39.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
39.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
38.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
38.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
38.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
37.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
37.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
37.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
36.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
36.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
36.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
35.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
35.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
35.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
33.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
32.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
32.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
31.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
31.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
31.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
31.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
30.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
30.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
30.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
29.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
26.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
26.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
26.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
25.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
24.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
24.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
24.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
23.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
23.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
23.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
23.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
22.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
22.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
21.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
21.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
21.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
21.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
21.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
20.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
20.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
20.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
18.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
17.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
15.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
15.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
14.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
13.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
13.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
11.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
4.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
2.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
0.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 1.0
Samples: 4
Max nTPM: 1.2
Min nTPM: 0.6
Sample A
Male
1.1
Sample B
Male
1.0
Sample C
Female
1.2
Sample D
Female
0.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.