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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRA is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
67.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
66.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
65.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
64.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
63.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
63.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
62.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
58.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
56.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
56.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
55.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
54.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
53.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
53.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
52.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
51.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
50.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
48.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
47.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
46.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
46.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
46.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
42.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
42.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
42.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
40.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
39.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
39.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
38.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
38.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
38.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
37.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
37.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
37.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
36.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
35.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
35.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
32.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
32.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
31.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
31.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
30.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
30.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
30.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
29.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
29.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
28.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
27.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
27.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
27.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
27.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
26.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
25.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
24.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
24.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
22.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
21.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
21.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
19.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
19.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
19.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
16.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
15.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRA is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
80.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
79.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
76.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
75.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
71.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
70.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
68.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
68.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
68.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
68.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
67.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
66.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
65.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
64.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
64.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
62.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
62.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
62.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
62.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
61.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
61.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
61.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
61.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
61.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
61.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
60.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
60.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
60.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
59.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
59.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
59.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
59.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
59.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
59.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
59.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
59.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
58.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
58.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
58.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
58.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
58.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
58.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
58.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
57.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
57.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
57.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
57.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
57.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
57.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
57.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
57.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
57.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
56.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
56.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
56.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
56.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
56.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
56.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
56.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
56.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
55.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
55.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
55.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
55.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
55.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
55.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
54.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
54.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
54.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
54.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
54.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
53.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
53.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
53.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
53.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
53.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
53.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
53.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
52.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
52.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
52.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
52.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
52.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
52.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
52.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
52.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
51.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
51.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
51.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
51.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
51.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
51.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
51.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
50.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
50.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
50.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
50.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
50.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
50.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
50.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
50.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
50.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
50.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
50.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
49.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
49.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
49.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
49.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
49.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
49.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
49.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
49.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
49.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
48.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
48.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
48.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
48.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
48.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
48.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
48.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
48.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
48.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
48.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
48.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
48.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
48.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
48.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
47.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
47.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
47.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
47.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
47.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
47.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
47.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
47.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
47.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
47.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
47.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
47.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
47.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
47.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
47.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
47.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
46.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
46.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
46.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
46.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
46.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
46.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
46.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
46.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
45.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
45.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
45.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
45.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
45.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
45.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
45.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
45.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
45.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
45.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
45.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
45.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
45.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
45.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
45.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
45.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
45.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
45.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
45.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
45.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
44.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
44.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
44.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
44.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
44.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
44.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
44.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
44.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
44.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
44.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
43.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
43.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
43.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
43.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
43.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
43.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
43.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
43.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
43.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
43.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
42.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
42.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
42.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
42.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
42.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
42.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
42.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
42.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
41.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
41.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
41.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
41.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
41.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
41.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
41.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
41.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
41.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
41.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
41.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
41.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
41.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
41.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
40.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
40.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
40.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
40.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
40.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
40.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
40.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
40.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
40.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
40.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
40.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
39.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
39.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
39.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
39.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
39.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
39.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
39.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
39.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
39.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
39.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
39.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
39.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
39.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
38.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
38.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
38.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
38.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
38.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
38.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
38.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
38.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
38.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
38.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
38.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
38.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
38.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
38.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
37.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
37.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
37.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
37.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
37.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
37.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
37.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
37.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
37.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
37.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
37.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
37.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
37.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
37.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
36.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
36.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
36.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
36.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
36.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
36.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
36.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
36.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
36.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
36.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
36.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
36.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
36.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
36.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
36.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
35.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
35.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
35.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
35.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
35.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
35.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
35.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
35.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
35.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
35.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
34.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
34.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
34.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
34.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
34.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
34.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
34.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
34.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
34.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
34.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
34.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
34.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
34.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
33.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
33.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
33.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
33.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
33.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
33.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
33.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
33.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
33.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
33.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
33.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
33.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
33.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
33.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
33.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
33.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
32.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
32.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
32.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
32.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
32.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
32.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
32.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
32.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
32.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
32.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
32.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
32.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
32.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
31.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
31.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
31.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
31.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
31.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
31.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
31.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
31.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
31.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
31.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
31.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
31.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
30.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
30.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
30.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
30.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
30.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
30.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
30.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
30.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
30.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
30.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
30.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
29.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
29.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
29.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
29.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
29.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
29.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
29.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
29.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
29.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
29.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
29.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
29.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
28.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
28.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
28.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
28.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
28.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
28.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
28.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
28.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
28.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
28.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
27.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
27.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
27.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
27.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
27.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
27.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
27.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
27.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
27.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
27.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
27.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
27.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
27.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
27.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
27.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
26.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
26.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
26.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
26.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
26.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
26.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
26.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
26.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
26.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
26.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
26.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
25.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
25.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
25.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
25.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
25.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
25.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
25.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
25.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
25.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
25.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
24.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
24.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
24.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
24.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
24.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
24.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
24.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
24.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
24.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
24.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
24.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
23.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
23.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
23.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
23.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
23.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
23.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
23.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
23.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
23.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
23.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
22.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
22.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
22.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
22.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
22.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
22.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
22.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
22.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
22.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
21.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
21.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
21.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
21.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
21.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
21.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
20.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
20.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
20.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
20.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
20.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
20.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
20.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
20.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
20.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
19.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
19.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
19.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
19.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
19.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
19.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
19.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
19.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
19.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
18.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
18.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
17.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
17.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
17.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
17.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
17.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
17.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
16.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
16.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
16.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
16.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
16.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
15.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
15.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
15.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
13.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
13.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
13.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
13.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
11.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
6.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRA is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
90.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
86.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
77.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
77.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
77.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
76.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
74.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
71.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
69.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
67.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
67.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
66.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
66.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
65.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
64.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
63.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
63.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
62.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
61.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
61.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
60.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
60.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
59.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
59.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
58.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
56.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
56.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
55.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
55.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
55.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
54.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
54.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
53.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
53.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
53.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
53.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
53.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
53.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
52.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
51.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
51.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
50.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
49.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
49.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
48.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
46.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
46.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
45.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
45.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
44.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
44.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
43.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
43.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
43.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
42.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
42.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
42.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
42.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
41.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
41.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
41.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
41.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
41.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
40.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
40.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
40.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
40.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
40.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
39.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
39.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
38.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
37.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
37.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
36.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
36.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
36.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
36.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
36.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
35.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
34.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
34.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
34.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
34.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
34.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
32.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
32.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
30.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
30.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
29.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
27.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
26.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
25.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
25.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
23.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
23.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
22.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
21.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRA is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
118.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
118.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
108.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
105.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
102.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
96.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
93.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
92.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
91.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
88.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
87.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
85.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
82.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
80.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
79.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
77.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
74.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
72.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
71.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
71.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
70.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
68.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
68.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
68.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
68.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
67.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
67.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
63.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
63.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
62.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
61.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
61.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
60.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
60.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
59.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
59.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
59.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
59.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
57.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
57.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
56.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
56.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
56.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
56.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
55.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
55.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
55.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
55.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
55.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
55.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
54.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
52.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
52.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
51.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
51.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
51.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
50.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
50.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
49.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
49.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
48.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
48.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
48.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
48.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
48.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
48.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
47.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
47.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
47.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
47.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
46.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
46.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
45.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
45.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
44.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
44.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
44.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
44.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
44.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
43.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
43.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
43.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
43.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
42.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
42.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
42.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
42.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
42.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
41.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
41.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
41.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
41.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
41.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
40.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
40.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
40.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
40.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
40.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
39.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
39.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
39.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
39.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
39.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
39.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
38.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
38.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
38.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
38.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
38.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
38.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
38.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
37.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
37.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
37.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
37.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
37.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
37.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
36.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
36.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
36.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
36.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
36.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
36.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
36.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
36.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
36.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
36.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
35.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
35.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
35.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
35.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
35.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
35.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
35.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
35.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
35.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
35.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
35.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
34.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
34.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
34.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
34.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
34.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
34.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
33.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
33.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
33.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
33.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
33.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
33.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
33.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
33.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
33.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
33.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
32.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
32.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
32.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
32.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
32.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
32.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
32.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
32.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
32.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
31.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
31.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
31.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
31.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
31.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
31.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
31.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
31.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
31.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
31.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
31.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
31.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
30.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
30.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
30.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
30.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
30.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
30.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
29.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
29.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
29.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
29.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
29.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
29.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
28.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
28.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
28.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
28.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
28.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
27.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
27.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
27.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
27.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
27.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
27.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
27.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
27.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
27.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
27.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
27.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
26.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
26.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
26.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
26.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
26.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
26.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
25.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
25.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
25.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
25.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
25.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
25.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
25.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
25.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
25.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
25.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
25.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
24.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
24.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
24.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
23.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
23.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
23.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
23.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
23.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
22.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
22.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
22.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
22.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
22.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
22.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
21.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
21.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
21.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
21.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
21.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
21.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
21.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
21.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
21.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
20.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
20.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
19.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
19.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
19.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
19.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
19.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
18.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
18.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
18.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
18.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
18.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
17.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
17.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
17.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
17.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
16.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
16.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
16.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
16.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
16.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
15.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
14.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
14.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
14.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
13.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
12.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
11.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
11.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0025050003
Tumor
0.5
CPT0025920001
Normal
0.4
CPT0012770003
Normal
0.4
CPT0001510001
Normal
0.4
CPT0013790003
Normal
0.4
CPT0069010001
Normal
0.4
CPT0088710001
Normal
0.4
CPT0077140001
Normal
0.4
CPT0069190001
Normal
0.3
CPT0012640003
Normal
0.3
CPT0065450001
Normal
0.3
CPT0077500001
Normal
0.3
CPT0001230001
Normal
0.3
CPT0020020001
Normal
0.3
CPT0066430001
Normal
0.3
CPT0079300001
Normal
0.3
CPT0023710001
Normal
0.3
CPT0014450004
Tumor
0.3
CPT0020130001
Normal
0.3
CPT0026420001
Normal
0.3
CPT0081620001
Normal
0.3
CPT0092740003
Normal
0.3
CPT0012290003
Normal
0.3
CPT0092290003
Tumor
0.3
CPT0000790001
Normal
0.3
CPT0089480003
Normal
0.3
CPT0063640001
Normal
0.3
CPT0082010001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0006950001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0014160003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0075170001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0012280003
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0014130001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0014350001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0000660001
Normal
0.1
CPT0088500001
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0088550004
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0012550003
Tumor
0.0
CPT0011240003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0088920001
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0065430003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0019130003
Tumor
-0.2
CPT0086890003
Normal
-0.2
CPT0078830003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0002350011
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0064400001
Normal
-0.2
CPT0006900003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0001180009
Tumor
-0.3
CPT0023350003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0012900004
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0081880003
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0086820003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0079180003
Tumor
-0.4
CPT0001540009
Tumor
-0.5
CPT0025110003
Tumor
-0.5
CPT0007860003
Tumor
-0.5
CPT0015730003
Tumor
-0.5
CPT0017410003
Tumor
-0.7
CPT0001340003
Tumor
-0.7
CPT0078660003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
