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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
125.8
nTPM
GTEx:
125.8
nTPM
FANTOM5:
439.3
Scaled Tags Per Million
Pig:
154.8
nTPM
Mouse:
440.5
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
125.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 125.8
Samples: 105
Max nTPM: 327.2
Min nTPM: 20.8
Std nTPM: 58.1
Median nTPM:
2_1
77 years, female
327.2
218_1
71 years, female
321.8
322_1
76 years, male
292.1
321_1
62 years, female
273.0
447_1
81 years, male
256.0
293_1
68 years, female
248.6
384_1
83 years, male
231.8
350_1
84 years, female
213.9
319_1
81 years, male
207.0
307_1
66 years, female
192.1
495_1
57 years, female
184.2
348_1
84 years, male
181.6
317_1
60 years, male
178.3
173_1
67 years, male
169.1
353_1
82 years, female
168.0
316_1
62 years, male
166.0
377_1
82 years, female
164.5
163_1
78 years, male
162.4
311_1
78 years, male
158.1
351_1
91 years, male
158.1
386_1
76 years, male
154.0
376_1
75 years, female
153.2
320_1
89 years, female
152.1
177_1
74 years, male
151.6
452_1
88 years, female
151.5
347_1
72 years, male
151.4
6_1
73 years, female
149.5
352_1
62 years, male
149.5
349_1
83 years, male
149.2
251_1
78 years, male
145.0
243_1
75 years, male
144.9
406_1
79 years, male
143.4
480_1
63 years, male
141.7
425_1
59 years, female
141.3
237_1
82 years, male
140.9
189_1
76 years, male
140.7
356_1
87 years, female
140.3
354_1
81 years, female
139.8
404_1
82 years, female
139.4
405_1
91 years, male
138.7
41_1
94 years, female
138.6
318_1
68 years, male
138.2
172_1
72 years, female
137.1
295_1
61 years, female
134.8
292_1
71 years, male
134.7
139_1
64 years, female
134.1
379_1
60 years, male
132.1
526_1
61 years, male
129.5
335_1
73 years, female
128.9
291_1
76 years, male
127.3
145_1
84 years, male
127.2
389_1
86 years, female
122.5
517_1
88 years, male
122.4
375_1
74 years, female
120.1
394_1
75 years, female
119.8
286_1
68 years, female
119.0
115_1
83 years, male
117.0
506_1
65 years, male
116.6
355_1
70 years, female
114.8
229_1
69 years, female
113.7
153_1
70 years, female
111.9
17_1
71 years, male
111.7
518_1
75 years, female
111.7
324_1
76 years, male
108.4
396_1
62 years, male
106.6
246_1
77 years, male
106.0
120_1
70 years, female
105.5
4_1
88 years, female
104.9
503_1
68 years, male
104.2
137_1
83 years, male
103.6
35_1
74 years, female
101.4
288_1
66 years, female
100.0
266_1
85 years, male
99.2
264_1
73 years, female
98.7
126_1
63 years, male
98.6
265_1
87 years, male
97.3
18_1
88 years, male
96.2
254_1
77 years, female
95.9
468_1
89 years, male
93.9
217_1
76 years, male
89.2
314_1
67 years, male
88.5
117_1
61 years, male
87.2
499_1
55 years, female
85.0
308_1
70 years, female
83.5
99_1
64 years, male
80.9
9_1
66 years, female
80.7
109_1
81 years, female
79.9
81_1
67 years, male
71.8
313_1
79 years, female
70.2
119_1
70 years, female
68.7
42_1
85 years, male
66.5
315_1
62 years, female
60.5
162_1
79 years, female
57.7
32_1
67 years, male
56.7
89_1
63 years, male
51.5
43_1
64 years, female
50.1
142_1
61 years, female
49.9
415_1
77 years, female
49.1
466_1
57 years, female
40.6
491_1
89 years, female
40.4
501_1
88 years, male
38.9
414_1
84 years, female
34.4
413_1
59 years, female
29.3
490_1
67 years, female
22.0
149_1
88 years, male
20.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
