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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RHPN2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
27.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
27.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
27.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
26.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
24.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
24.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
23.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
20.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
20.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
19.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
19.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
19.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
18.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
18.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
18.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
17.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
17.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
16.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
16.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
16.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
15.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
14.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
13.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
13.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
13.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
12.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
12.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
12.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
12.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
12.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
11.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
10.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
10.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
10.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
10.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
9.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
9.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
8.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
8.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
8.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
8.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
8.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
7.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
4.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
3.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
3.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
3.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
2.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
1.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
1.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RHPN2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
48.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
48.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
47.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
47.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
45.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
40.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
39.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
39.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
39.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
39.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
38.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
38.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
38.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
37.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
36.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
34.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
34.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
34.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
34.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
34.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
33.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
33.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
33.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
33.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
32.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
32.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
31.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
31.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
31.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
30.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
30.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
30.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
30.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
30.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
29.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
29.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
29.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
29.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
29.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
29.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
29.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
28.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
28.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
28.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
28.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
28.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
28.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
28.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
28.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
28.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
28.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
27.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
27.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
27.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
27.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
27.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
27.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
27.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
27.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
27.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
26.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
26.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
26.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
26.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
26.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
26.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
26.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
26.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
26.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
26.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
26.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
26.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
26.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
25.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
25.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
25.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
25.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
25.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
25.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
25.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
25.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
25.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
25.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
25.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
25.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
25.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
25.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
25.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
24.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
24.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
24.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
24.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
24.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
24.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
24.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
24.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
24.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
24.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
24.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
24.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
24.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
24.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
23.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
23.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
23.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
23.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
23.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
23.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
23.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
23.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
23.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
23.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
22.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
22.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
22.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
22.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
22.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
22.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
22.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
22.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
22.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
22.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
22.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
22.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
22.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
22.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
22.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
22.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
22.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
22.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
22.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
22.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
21.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
21.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
21.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
21.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
21.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
21.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
21.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
21.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
21.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
21.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
21.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
21.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
21.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
20.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
20.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
20.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
20.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
20.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
20.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
20.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
20.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
20.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
20.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
20.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
20.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
20.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
20.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
20.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
20.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
20.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
20.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
19.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
19.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
19.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
19.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
19.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
19.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
19.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
19.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
19.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
19.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
19.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
19.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
19.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
19.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
19.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
19.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
19.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
19.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
19.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
18.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
18.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
18.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
18.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
18.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
18.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
18.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
18.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
18.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
18.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
18.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
18.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
18.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
18.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
18.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
18.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
18.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
18.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
17.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
17.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
17.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
17.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
17.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
17.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
17.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
17.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
17.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
17.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
17.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
17.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
17.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
17.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
17.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
17.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
17.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
17.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
17.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
16.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
16.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
16.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
16.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
16.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
16.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
16.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
16.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
16.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
16.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
16.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
16.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
16.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
16.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
16.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
16.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
15.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
15.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
15.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
15.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
15.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
15.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
15.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
15.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
15.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
15.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
15.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
15.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
15.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
15.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
15.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
15.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
14.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
14.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
14.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
14.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
14.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
14.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
14.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
14.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
14.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
14.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
13.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
13.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
13.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
13.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
13.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
13.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
13.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
13.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
13.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
13.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
12.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
12.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
12.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
12.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
12.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
12.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
12.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
12.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
12.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
11.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
11.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
11.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
11.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
11.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
11.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
11.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
11.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
11.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
11.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
11.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
11.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
10.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
10.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
10.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
10.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
9.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
9.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
9.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
9.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
9.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
8.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
8.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
8.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
8.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
8.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
8.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
8.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
8.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
7.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
7.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
7.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
7.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
7.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
6.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
6.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
6.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
5.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
5.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
5.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
5.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
4.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
4.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
4.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
4.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
3.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
3.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
3.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
3.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
3.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
2.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
2.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
2.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RHPN2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
100.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
45.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
40.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
39.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
39.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
38.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
37.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
36.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
35.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
34.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
34.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
33.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
32.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
32.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
31.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
30.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
30.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
29.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
29.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
29.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
29.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
29.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
28.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
28.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
28.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
28.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
28.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
28.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
27.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
27.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
26.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
25.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
25.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
25.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
24.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
24.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
24.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
23.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
22.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
22.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
21.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
21.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
20.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
20.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
19.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
19.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
19.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
18.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
18.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
18.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
18.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
18.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
17.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
17.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
16.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
16.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
16.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
16.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
15.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
15.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
15.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
15.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
15.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
15.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
14.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
14.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
12.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
10.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
9.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
9.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RHPN2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
72.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
70.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
68.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
67.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
67.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
63.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
62.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
59.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
59.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
58.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
58.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
57.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
57.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
57.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
54.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
53.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
49.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
49.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
49.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
48.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
47.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
46.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
46.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
45.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
44.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
44.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
43.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
42.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
42.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
41.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
41.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
40.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
40.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
39.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
39.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
39.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
39.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
38.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
37.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
37.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
37.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
37.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
37.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
37.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
37.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
36.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
36.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
36.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
36.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
35.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
35.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
35.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
35.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
35.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
35.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
34.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
33.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
33.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
33.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
33.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
33.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
32.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
32.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
32.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
31.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
31.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
31.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
30.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
30.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
30.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
30.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
30.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
30.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
30.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
30.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
30.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
30.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
29.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
29.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
29.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
28.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
28.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
28.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
28.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
27.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
27.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
27.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
27.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
26.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
26.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
26.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
26.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
26.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
25.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
25.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
25.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
25.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
25.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
25.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
25.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
25.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
24.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
24.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
24.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
24.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
24.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
24.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
24.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
24.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
24.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
23.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
23.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
23.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
23.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
22.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
22.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
22.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
22.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
22.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
22.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
22.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
22.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
21.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
21.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
21.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
21.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
21.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
21.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
21.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
20.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
20.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
20.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
20.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
20.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
20.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
20.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
19.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
19.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
19.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
19.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
18.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
18.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
18.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
18.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
18.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
18.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
18.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
18.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
18.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
17.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
17.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
17.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
16.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
16.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
16.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
16.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
16.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
16.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
16.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
15.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
15.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
15.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
15.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
15.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
15.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
15.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
14.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
14.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
14.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
14.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
14.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
14.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
14.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
13.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
13.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
13.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
13.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
12.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
12.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
12.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
12.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
12.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
12.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
12.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
11.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
11.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
11.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
11.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
11.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
11.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
10.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
10.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
10.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
10.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
10.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
9.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
9.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
8.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
8.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
7.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
7.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
7.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
7.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
7.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
6.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
6.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
6.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
5.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
5.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
4.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
4.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
4.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
4.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
3.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
3.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
2.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
2.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
1.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001180009
Tumor
1.1
CPT0019130003
Tumor
0.9
CPT0077110003
Tumor
0.8
CPT0026410003
Tumor
0.7
CPT0014450004
Tumor
0.7
CPT0069000003
Tumor
0.7
CPT0025230003
Tumor
0.7
CPT0025580004
Tumor
0.6
CPT0007320003
Tumor
0.6
CPT0010110003
Tumor
0.6
CPT0078800003
Tumor
0.6
CPT0011410003
Tumor
0.6
CPT0015730003
Tumor
0.5
CPT0006900003
Tumor
0.5
CPT0088900003
Tumor
0.5
CPT0001540009
Tumor
0.5
CPT0009060003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0001220008
Tumor
0.5
CPT0078830003
Tumor
0.5
CPT0079230003
Tumor
0.5
CPT0063320003
Tumor
0.4
CPT0009000003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0000870016
Tumor
0.4
CPT0065810003
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0001500009
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0088480003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0025050003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0012550003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0081880003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0001190001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0017450001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0020120003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0078840001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0017410003
Tumor
-0.2
CPT0000890001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0088630003
Tumor
-0.2
CPT0065450001
Normal
-0.2
CPT0088760003
Tumor
-0.2
CPT0081620001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0011240003
Tumor
-0.2
CPT0012770003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0092730003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0010120001
Normal
-0.3
CPT0015910003
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0025290003
Tumor
-0.3
CPT0014350001
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0078510003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0075170001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0085670003
Tumor
-0.3
CPT0001550001
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0002350011
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0065820001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0086870003
Tumor
-0.3
CPT0079510001
Normal
-0.4
CPT0092190003
Normal
-0.4
CPT0069190001
Normal
-0.4
CPT0002370001
Normal
-0.4
CPT0076330003
Tumor
-0.4
CPT0024680001
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0077320001
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0001510001
Normal
-0.4
CPT0079300001
Normal
-0.4
CPT0001230001
Normal
-0.4
CPT0075560003
Tumor
-0.6
CPT0001340003
Tumor
-0.8
CPT0088550004
Tumor
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
