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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNRPA1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
50.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
33.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
24.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
23.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
21.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
19.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
19.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
19.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
18.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
17.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
16.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
16.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
16.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
16.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
16.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
15.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
15.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
15.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
14.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
14.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
14.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
13.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
12.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
12.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
11.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
11.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
11.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
9.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
9.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
8.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
7.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
6.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
4.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNRPA1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
110.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
96.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
60.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
55.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
48.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
47.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
46.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
45.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
44.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
42.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
41.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
41.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
41.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
40.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
39.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
39.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
38.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
37.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
37.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
37.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
37.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
35.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
35.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
34.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
34.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
34.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
34.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
34.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
33.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
33.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
32.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
32.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
32.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
32.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
32.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
32.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
32.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
32.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
32.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
32.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
32.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
32.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
31.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
31.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
31.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
31.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
31.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
30.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
30.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
30.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
30.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
30.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
30.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
30.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
30.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
30.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
30.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
29.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
29.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
29.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
29.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
29.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
29.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
29.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
29.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
29.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
28.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
28.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
28.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
28.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
28.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
28.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
28.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
28.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
28.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
28.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
28.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
28.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
28.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
28.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
28.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
28.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
28.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
28.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
28.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
28.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
28.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
28.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
27.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
27.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
27.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
27.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
27.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
27.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
27.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
27.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
27.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
27.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
27.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
27.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
26.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
26.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
26.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
26.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
26.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
26.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
26.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
26.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
26.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
26.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
26.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
26.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
26.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
26.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
26.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
26.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
26.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
25.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
25.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
25.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
25.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
25.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
25.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
25.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
25.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
25.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
25.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
24.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
24.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
24.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
24.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
24.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
24.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
24.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
24.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
24.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
24.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
24.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
24.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
24.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
24.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
24.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
24.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
24.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
24.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
24.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
24.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
24.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
24.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
24.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
24.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
24.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
24.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
24.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
23.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
23.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
23.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
23.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
23.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
23.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
23.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
23.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
23.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
23.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
23.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
23.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
23.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
23.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
23.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
23.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
23.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
23.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
23.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
23.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
22.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
22.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
22.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
22.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
22.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
22.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
22.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
22.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
22.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
22.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
22.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
22.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
22.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
22.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
22.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
22.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
22.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
22.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
22.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
22.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
22.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
22.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
22.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
22.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
22.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
22.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
22.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
22.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
22.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
22.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
21.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
21.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
21.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
21.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
21.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
21.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
21.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
21.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
21.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
21.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
21.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
21.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
21.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
21.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
21.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
21.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
21.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
21.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
21.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
21.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
21.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
21.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
21.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
21.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
21.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
21.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
21.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
21.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
21.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
21.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
21.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
21.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
21.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
20.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
20.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
20.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
20.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
20.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
20.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
20.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
20.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
20.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
20.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
20.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
20.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
20.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
20.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
20.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
20.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
20.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
20.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
20.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
20.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
20.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
20.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
20.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
20.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
20.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
20.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
20.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
20.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
19.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
19.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
19.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
19.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
19.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
19.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
19.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
19.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
19.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
19.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
19.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
19.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
19.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
19.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
19.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
19.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
19.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
19.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
19.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
19.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
19.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
19.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
19.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
19.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
19.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
19.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
19.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
19.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
19.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
19.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
19.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
19.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
18.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
18.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
18.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
18.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
18.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
18.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
18.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
18.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
18.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
18.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
18.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
18.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
18.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
18.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
18.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
18.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
18.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
18.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
18.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
18.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
18.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
18.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
18.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
18.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
18.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
18.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
18.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
18.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
17.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
17.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
17.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
17.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
17.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
17.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
17.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
17.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
17.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
17.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
17.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
17.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
17.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
16.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
16.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
16.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
16.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
16.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
16.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
16.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
16.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
16.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
16.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
16.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
16.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
16.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
16.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
16.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
16.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
16.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
16.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
16.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
16.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
16.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
15.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
15.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
15.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
15.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
15.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
15.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
15.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
15.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
15.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
15.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
15.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
15.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
15.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
14.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
14.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
14.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
14.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
14.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
14.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
14.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
14.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
14.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
14.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
13.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
13.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
13.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
13.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
13.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
13.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
12.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
12.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
12.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
12.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
12.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
12.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
12.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
12.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
12.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
11.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
11.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
11.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
10.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
10.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
10.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
10.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
9.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNRPA1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
50.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
46.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
44.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
44.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
40.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
38.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
37.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
36.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
35.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
34.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
32.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
30.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
29.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
29.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
29.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
28.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
27.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
27.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
26.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
26.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
25.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
25.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
25.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
25.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
24.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
24.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
24.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
24.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
24.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
24.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
23.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
22.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
22.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
22.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
22.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
21.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
21.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
21.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
21.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
21.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
20.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
20.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
20.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
20.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
19.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
19.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
19.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
18.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
18.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
18.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
18.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
18.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
18.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
17.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
17.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
17.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
16.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
16.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
16.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
16.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
15.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
15.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
15.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
15.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
15.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
14.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
14.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
14.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
13.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
11.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNRPA1 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
105.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
75.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
62.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
60.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
52.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
42.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
39.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
39.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
39.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
39.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
38.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
38.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
36.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
34.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
32.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
31.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
31.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
31.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
30.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
30.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
29.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
28.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
28.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
28.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
28.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
27.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
27.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
27.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
27.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
27.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
27.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
27.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
27.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
26.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
26.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
26.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
26.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
25.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
25.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
25.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
25.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
25.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
25.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
25.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
25.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
25.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
25.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
25.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
25.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
24.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
24.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
24.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
24.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
24.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
24.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
24.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
24.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
24.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
24.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
24.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
24.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
23.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
23.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
23.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
23.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
23.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
23.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
23.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
22.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
22.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
22.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
22.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
22.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
22.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
22.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
22.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
22.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
22.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
22.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
22.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
22.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
22.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
21.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
21.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
21.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
21.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
21.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
21.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
21.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
21.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
21.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
21.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
20.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
20.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
20.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
20.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
20.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
20.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
20.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
20.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
20.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
20.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
20.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
20.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
19.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
19.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
19.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
19.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
19.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
19.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
19.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
19.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
18.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
18.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
18.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
18.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
18.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
18.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
18.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
18.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
17.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
17.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
17.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
17.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
17.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
17.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
17.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
17.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
17.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
17.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
17.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
17.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
16.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
16.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
16.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
16.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
16.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
16.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
16.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
16.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
15.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
15.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
15.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
15.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
15.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
14.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
14.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
14.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
14.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
14.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
14.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
13.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
13.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
13.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
13.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
13.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
13.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
12.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
12.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
12.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
11.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
11.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
11.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
11.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
11.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
10.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
10.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
10.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
10.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
10.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
10.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
9.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
9.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
9.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
7.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
7.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
7.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
7.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
6.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
6.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
6.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
6.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
5.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
4.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
1.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0017410003
Tumor
0.6
CPT0001340003
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0088550004
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0009060003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0024680001
Normal
0.4
CPT0026410003
Tumor
0.4
CPT0012900004
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0012640003
Normal
0.3
CPT0084560003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0012080003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0014370004
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0085670003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0092160003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0078930003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0081990003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0009020003
Normal
0.2
CPT0092790003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0086830003
Normal
0.1
CPT0014470001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0079000001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0007470001
Normal
0.1
CPT0001180009
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0014350001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0023710001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0012550003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0000790001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0088500001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0013790003
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0077310003
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0026420001
Normal
-0.2
CPT0002350011
Tumor
-0.2
CPT0002270011
Tumor
-0.2
CPT0020120003
Tumor
-0.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
